RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 IGFN1Q86VF2 1251 aa6.91□□□□□ -1.3
TPM3-203ENST00000312970 NRMQ8IXM6 262 aa6.91□□□□□ -1.3
TPM3-203ENST00000312970 OR8H2Q8N162 312 aa6.91□□□□□ -1.3
TPM3-203ENST00000312970 CLDN22Q8N7P3 220 aa6.91□□□□□ -1.3
TPM3-203ENST00000312970 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.91□□□□□ -1.3
TPM3-203ENST00000312970 LRRC75AQ8NAA5 344 aa6.91□□□□□ -1.3
TPM3-203ENST00000312970 OR4M2Q8NGB6 313 aa6.91□□□□□ -1.3
TPM3-203ENST00000312970 ABHD4Q8TB40 342 aa6.91□□□□□ -1.3
TPM3-203ENST00000312970 IPCEF1Q8WWN9 437 aaPredicted RBP6.91□□□□□ -1.3
TPM3-203ENST00000312970 GTF3AQ92664 365 aaKnown RBP6.91□□□□□ -1.3
TPM3-203ENST00000312970 DIRC2Q96SL1 478 aa6.91□□□□□ -1.3
TPM3-203ENST00000312970 WACQ9BTA9 647 aa6.91□□□□□ -1.3
TPM3-203ENST00000312970 TUBG2Q9NRH3 451 aa6.91□□□□□ -1.3
TPM3-203ENST00000312970 FGFR1OP2Q9NVK5 253 aa6.91□□□□□ -1.3
TPM3-203ENST00000312970 RHCGQ9UBD6 479 aa6.91□□□□□ -1.3
TPM3-203ENST00000312970 GRHPRQ9UBQ7 328 aa6.91□□□□□ -1.3
TPM3-203ENST00000312970 SF3B6Q9Y3B4 125 aaKnown RBP6.91□□□□□ -1.3
TPM3-203ENST00000312970 CACNG2Q9Y698 323 aa6.91□□□□□ -1.3
TPM3-203ENST00000312970 LOC105371242A0A075B767 164 aa6.9□□□□□ -1.3
TPM3-203ENST00000312970 TRAV27A0A087WT01 109 aa6.9□□□□□ -1.3
TPM3-203ENST00000312970 A0A1W2PPL8 197 aa6.9□□□□□ -1.3
TPM3-203ENST00000312970 EFCAB9A8MZ26 197 aa6.9□□□□□ -1.3
TPM3-203ENST00000312970 TRIM77I1YAP6 450 aa6.9□□□□□ -1.3
TPM3-203ENST00000312970 J3KTA2 159 aa6.9□□□□□ -1.3
TPM3-203ENST00000312970 FFAR1O14842 300 aa6.9□□□□□ -1.3
TPM3-203ENST00000312970 SLC22A2O15244 555 aa6.9□□□□□ -1.3
TPM3-203ENST00000312970 AHCYL1O43865 530 aa6.9□□□□□ -1.3
TPM3-203ENST00000312970 COX5BP10606 129 aa6.9□□□□□ -1.3
TPM3-203ENST00000312970 MSR1P21757 451 aa6.9□□□□□ -1.3
TPM3-203ENST00000312970 FUT4P22083 530 aa6.9□□□□□ -1.3
TPM3-203ENST00000312970 TNFSF4P23510 183 aa6.9□□□□□ -1.3
TPM3-203ENST00000312970 CFPP27918 469 aa6.9□□□□□ -1.3
TPM3-203ENST00000312970 RPL4P36578 427 aaKnown RBP6.9□□□□□ -1.3
TPM3-203ENST00000312970 MECP2P51608 486 aaKnown RBP6.9□□□□□ -1.3
TPM3-203ENST00000312970 CDK5R2Q13319 367 aa6.9□□□□□ -1.3
TPM3-203ENST00000312970 FHL1Q13642 323 aa6.9□□□□□ -1.3
TPM3-203ENST00000312970 ENDOGQ14249 297 aaKnown RBP6.9□□□□□ -1.3
TPM3-203ENST00000312970 ZMAT1Q5H9K5 638 aa6.9□□□□□ -1.3
TPM3-203ENST00000312970 TMEM255AQ5JRV8 349 aa6.9□□□□□ -1.3
TPM3-203ENST00000312970 ZNF774Q6NX45 483 aa6.9□□□□□ -1.3
TPM3-203ENST00000312970 ZNF730Q6ZMV8 503 aa6.9□□□□□ -1.3
TPM3-203ENST00000312970 ARPINQ7Z6K5 226 aa6.9□□□□□ -1.3
TPM3-203ENST00000312970 VTCN1Q7Z7D3 282 aa6.9□□□□□ -1.3
TPM3-203ENST00000312970 SLC15A3Q8IY34 581 aa6.9□□□□□ -1.3
TPM3-203ENST00000312970 OFCC1Q8IZS5 231 aa6.9□□□□□ -1.3
TPM3-203ENST00000312970 SEMA6DQ8NFY4 1073 aa6.9□□□□□ -1.3
TPM3-203ENST00000312970 RP9Q8TA86 221 aaKnown RBP6.9□□□□□ -1.3
TPM3-203ENST00000312970 NANPQ8TBE9 248 aa6.9□□□□□ -1.3
TPM3-203ENST00000312970 FAM216AQ8WUB2 273 aa6.9□□□□□ -1.3
TPM3-203ENST00000312970 ACOT11Q8WXI4 607 aaPredicted RBP6.9□□□□□ -1.3
TPM3-203ENST00000312970 JMJD8Q96S16 334 aa6.9□□□□□ -1.3
TPM3-203ENST00000312970 GAL3ST1Q99999 423 aa6.9□□□□□ -1.3
TPM3-203ENST00000312970 TMPRSS13Q9BYE2 586 aa6.9□□□□□ -1.3
TPM3-203ENST00000312970 C7orf69Q9H7B7 122 aa6.9□□□□□ -1.3
TPM3-203ENST00000312970 POLE4Q9NR33 117 aa6.9□□□□□ -1.3
TPM3-203ENST00000312970 MAN2C1Q9NTJ4 1040 aa6.9□□□□□ -1.3
TPM3-203ENST00000312970 TBCCD1Q9NVR7 557 aa6.9□□□□□ -1.3
TPM3-203ENST00000312970 CMTM6Q9NX76 183 aa6.9□□□□□ -1.3
TPM3-203ENST00000312970 NDRG4Q9ULP0 352 aaKnown RBP6.9□□□□□ -1.3
TPM3-203ENST00000312970 SNX13Q9Y5W8 968 aa6.9□□□□□ -1.3
TPM3-203ENST00000312970 CAPN7Q9Y6W3 813 aa6.9□□□□□ -1.3
TPM3-203ENST00000312970 NBEAL2Q6ZNJ1 2754 aa6.9□□□□□ -1.31
TPM3-203ENST00000312970 A0A087WUU8 490 aa6.89□□□□□ -1.31
TPM3-203ENST00000312970 TMEM89A2RUT3 159 aa6.89□□□□□ -1.31
TPM3-203ENST00000312970 ISPDA4D126 451 aa6.89□□□□□ -1.31
TPM3-203ENST00000312970 ZSCAN5BA6NJL1 495 aa6.89□□□□□ -1.31
TPM3-203ENST00000312970 CXCR6O00574 342 aa6.89□□□□□ -1.31
TPM3-203ENST00000312970 XKRYO14609 159 aa6.89□□□□□ -1.31
TPM3-203ENST00000312970 TIMM8AO60220 97 aaPredicted RBP6.89□□□□□ -1.31
TPM3-203ENST00000312970 RGS9O75916 674 aaPredicted RBP6.89□□□□□ -1.31
TPM3-203ENST00000312970 ZNF682O95780 498 aa6.89□□□□□ -1.31
TPM3-203ENST00000312970 ABHD16AO95870 558 aa6.89□□□□□ -1.31
TPM3-203ENST00000312970 CD55P08174 381 aa6.89□□□□□ -1.31
TPM3-203ENST00000312970 CD14P08571 375 aa6.89□□□□□ -1.31
TPM3-203ENST00000312970 SBK2P0C263 348 aa6.89□□□□□ -1.31
TPM3-203ENST00000312970 GSTM3P21266 225 aa6.89□□□□□ -1.31
TPM3-203ENST00000312970 FPR2P25090 351 aa6.89□□□□□ -1.31
TPM3-203ENST00000312970 COMPP49747 757 aaPredicted RBP6.89□□□□□ -1.31
TPM3-203ENST00000312970 HILS1P60008 231 aa6.89□□□□□ -1.31
TPM3-203ENST00000312970 ACTG1P63261 375 aa6.89□□□□□ -1.31
TPM3-203ENST00000312970 TNFAIP6P98066 277 aaPredicted RBP6.89□□□□□ -1.31
TPM3-203ENST00000312970 ID3Q02535 119 aa6.89□□□□□ -1.31
TPM3-203ENST00000312970 LIPEQ05469 1076 aa6.89□□□□□ -1.31
TPM3-203ENST00000312970 PSG7Q13046 419 aa6.89□□□□□ -1.31
TPM3-203ENST00000312970 ZBED5Q49AG3 693 aa6.89□□□□□ -1.31
TPM3-203ENST00000312970 IFI44LQ53G44 452 aa6.89□□□□□ -1.31
TPM3-203ENST00000312970 MTX3Q5HYI7 312 aa6.89□□□□□ -1.31
TPM3-203ENST00000312970 CGB2Q6NT52 195 aa6.89□□□□□ -1.31
TPM3-203ENST00000312970 TBPL2Q6SJ96 375 aa6.89□□□□□ -1.31
TPM3-203ENST00000312970 C16orf54Q6UWD8 224 aa6.89□□□□□ -1.31
TPM3-203ENST00000312970 RFPL4BQ6ZWI9 263 aa6.89□□□□□ -1.31
TPM3-203ENST00000312970 TMPRSS11FQ6ZWK6 438 aa6.89□□□□□ -1.31
TPM3-203ENST00000312970 MBOAT2Q6ZWT7 520 aa6.89□□□□□ -1.31
TPM3-203ENST00000312970 CBLL1Q75N03 491 aa6.89□□□□□ -1.31
TPM3-203ENST00000312970 C1QL2Q7Z5L3 287 aa6.89□□□□□ -1.31
TPM3-203ENST00000312970 CYP4Z1Q86W10 505 aa6.89□□□□□ -1.31
TPM3-203ENST00000312970 POU5F2Q8N7G0 328 aa6.89□□□□□ -1.31
TPM3-203ENST00000312970 NPEPL1Q8NDH3 523 aa6.89□□□□□ -1.31
TPM3-203ENST00000312970 ST7LQ8TDW4 575 aa6.89□□□□□ -1.31
TPM3-203ENST00000312970 GEMIN6Q8WXD5 167 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms