RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 ARRB2P32121 409 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 OR10A3P58181 314 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 CDK5Q00535 292 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 DNAJC5GQ8N7S2 189 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 SLC38A9Q8NBW4 561 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 ZIC5Q96T25 663 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 CA10Q9NS85 328 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 SLC39A9Q9NUM3 307 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 TMEFF2Q9UIK5 374 aaPredicted RBP8.06□□□□□ -1.12
COL6A5-202ENST00000312481 CA5BQ9Y2D0 317 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 COL6A6A6NMZ7 2263 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 A0A0A6YYD5 115 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 TOX4O94842 621 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 YIF1AO95070 293 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 AQP2P41181 271 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 CAV3P56539 151 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 PLGLAQ15195 96 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 MS4A6EQ96DS6 147 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 SAMD10Q9BYL1 202 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 SLAMF8Q9P0V8 285 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 HCRTR1O43613 425 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 HMGA1P17096 107 aaKnown RBP8.06□□□□□ -1.12
COL6A5-202ENST00000312481 RAET1LQ5VY80 246 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 SLC39A5Q6ZMH5 540 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 LINC00346Q8IVM7 164 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 CLEC1AQ8NC01 280 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 ZNF75AQ96N20 296 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 SLC25A37Q9NYZ2 338 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 MED12LQ86YW9 2145 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 BSGP35613 385 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 ETV5P41161 510 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 IL13RA2Q14627 380 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 C2orf27AQ580R0 203 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 TANGO2Q6ICL3 276 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 ZNF836Q6ZNA1 936 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 HRH4Q9H3N8 390 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 TMPRSS5Q9H3S3 457 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 HRO43593 1189 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 SIGLEC6O43699 453 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 MMP7P09237 267 aaPredicted RBP8.05□□□□□ -1.12
COL6A5-202ENST00000312481 HLA-DOBP13765 273 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 FUT7Q11130 342 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 FCN2Q15485 313 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 TMEM30BQ3MIR4 351 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 GLYATL3Q5SZD4 288 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 ADPRHL1Q8NDY3 354 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 OR10Z1Q8NGY1 313 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 SLC6A17Q9H1V8 727 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 C11orf98E9PRG8 122 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 H0YGG7 62 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 SPINT2O43291 252 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 DCDP81605 110 aaKnown RBP8.05□□□□□ -1.12
COL6A5-202ENST00000312481 OR10Q1Q8NGQ4 319 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 ANAPC16Q96DE5 110 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 SARGQ9BW04 601 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 TRBV5-3A0A0A0MS03 114 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 THBS4P35443 961 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 C1orf140Q5VVS0 124 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 SSX9Q7RTT3 188 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 ZNF687Q8N1G0 1237 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 PIK3IP1Q96FE7 263 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 BARHL1Q9BZE3 327 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 PLEK2Q9NYT0 353 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 MRPS28Q9Y2Q9 187 aaKnown RBP8.05□□□□□ -1.12
COL6A5-202ENST00000312481 MEN1O00255 615 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 ZNF593O00488 134 aaPredicted RBP8.05□□□□□ -1.12
COL6A5-202ENST00000312481 TCN2P20062 427 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 CTSOP43234 321 aaPredicted RBP8.05□□□□□ -1.12
COL6A5-202ENST00000312481 CRYBB2P43320 205 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 MFAP5Q13361 173 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 LRRC37A5PQ49AS3 106 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 C1orf53Q5VUE5 145 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 PTOV1Q86YD1 416 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 ST8SIA4Q92187 359 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 ZNF681Q96N22 645 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 SLC35B3Q9H1N7 401 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 GAR1Q9NY12 217 aaKnown RBP8.05□□□□□ -1.12
COL6A5-202ENST00000312481 SLC17A4Q9Y2C5 497 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 ATXN7L3Q14CW9 347 aaPredicted RBP8.05□□□□□ -1.12
COL6A5-202ENST00000312481 TP53I3Q53FA7 332 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 TRMT12Q53H54 448 aaKnown RBP8.05□□□□□ -1.12
COL6A5-202ENST00000312481 RPS27LQ71UM5 84 aaKnown RBP8.05□□□□□ -1.12
COL6A5-202ENST00000312481 NHLRC2Q8NBF2 726 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 OR5AP2Q8NGF4 316 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 OR10J5Q8NHC4 309 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 ST8SIA2Q92186 375 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 DIO2Q92813 273 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 A0A0G2JN53 185 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 CTHP32929 405 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 ARL3P36405 182 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 RAB13P51153 203 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 IRF3Q14653 427 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 FBXO46Q6PJ61 603 aaPredicted RBP8.05□□□□□ -1.12
COL6A5-202ENST00000312481 DAZAP1Q96EP5 407 aaKnown RBP8.05□□□□□ -1.12
COL6A5-202ENST00000312481 RNF2Q99496 336 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 IGFLR1Q9H665 355 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 LOC105369274A0A096LPK9 316 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 GPX5O75715 221 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 COX5AP20674 150 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 CDONQ4KMG0 1287 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms