RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 GJC3Q8NFK1 279 aa14.77□□□□□ -0.05
CLCF1-201ENST00000312438 CPT1CQ8TCG5 803 aa14.77□□□□□ -0.05
CLCF1-201ENST00000312438 TSEN15Q8WW01 171 aaKnown RBP14.77□□□□□ -0.05
CLCF1-201ENST00000312438 HTRA1Q92743 480 aa14.77□□□□□ -0.05
CLCF1-201ENST00000312438 NABP1Q96AH0 204 aa14.77□□□□□ -0.05
CLCF1-201ENST00000312438 SDHCQ99643 169 aaPredicted RBP14.77□□□□□ -0.05
CLCF1-201ENST00000312438 SMAD5Q99717 465 aaKnown RBP14.77□□□□□ -0.05
CLCF1-201ENST00000312438 PARPBPQ9NWS1 579 aa14.77□□□□□ -0.05
CLCF1-201ENST00000312438 V9GY05 133 aa14.77□□□□□ -0.05
CLCF1-201ENST00000312438 CPN1P15169 458 aa14.76□□□□□ -0.05
CLCF1-201ENST00000312438 PTBP1P26599 531 aaKnown RBP eCLIP14.76□□□□□ -0.05
CLCF1-201ENST00000312438 HSD11B1P28845 292 aa14.76□□□□□ -0.05
CLCF1-201ENST00000312438 ENDOGQ14249 297 aaKnown RBP14.76□□□□□ -0.05
CLCF1-201ENST00000312438 ZNF79Q15937 498 aa14.76□□□□□ -0.05
CLCF1-201ENST00000312438 DCDC5Q6ZRR9 648 aa14.76□□□□□ -0.05
CLCF1-201ENST00000312438 ASB5Q8WWX0 329 aa14.76□□□□□ -0.05
CLCF1-201ENST00000312438 SOSTQ9BQB4 213 aa14.76□□□□□ -0.05
CLCF1-201ENST00000312438 PRRG4Q9BZD6 226 aa14.76□□□□□ -0.05
CLCF1-201ENST00000312438 SRRQ9GZT4 340 aa14.76□□□□□ -0.05
CLCF1-201ENST00000312438 RNF122Q9H9V4 155 aa14.76□□□□□ -0.05
CLCF1-201ENST00000312438 CRLF2Q9HC73 371 aa14.76□□□□□ -0.05
CLCF1-201ENST00000312438 PNRC2Q9NPJ4 139 aaKnown RBP14.76□□□□□ -0.05
CLCF1-201ENST00000312438 EMC3Q9P0I2 261 aa14.76□□□□□ -0.05
CLCF1-201ENST00000312438 KLK13Q9UKR3 277 aa14.76□□□□□ -0.05
CLCF1-201ENST00000312438 HHLA2Q9UM44 414 aa14.76□□□□□ -0.05
CLCF1-201ENST00000312438 DHDHQ9UQ10 334 aa14.76□□□□□ -0.05
CLCF1-201ENST00000312438 NOSIPQ9Y314 301 aaKnown RBP14.76□□□□□ -0.05
CLCF1-201ENST00000312438 CNTRLQ7Z7A1 2325 aa14.76□□□□□ -0.05
CLCF1-201ENST00000312438 IFITM5A6NNB3 132 aa14.76□□□□□ -0.05
CLCF1-201ENST00000312438 FAM25AB3EWG3 89 aa14.76□□□□□ -0.05
CLCF1-201ENST00000312438 FAM25CB3EWG5 89 aa14.76□□□□□ -0.05
CLCF1-201ENST00000312438 FAM25GB3EWG6 89 aa14.76□□□□□ -0.05
CLCF1-201ENST00000312438 MRPL33O75394 65 aaKnown RBP14.76□□□□□ -0.05
CLCF1-201ENST00000312438 ATF1P18846 271 aa14.76□□□□□ -0.05
CLCF1-201ENST00000312438 ACHEP22303 614 aa14.76□□□□□ -0.05
CLCF1-201ENST00000312438 GRB2P62993 217 aaKnown RBP14.76□□□□□ -0.05
CLCF1-201ENST00000312438 BCL2L15Q5TBC7 163 aa14.76□□□□□ -0.05
CLCF1-201ENST00000312438 STEAP3Q658P3 488 aa14.76□□□□□ -0.05
CLCF1-201ENST00000312438 CNIH2Q6PI25 160 aa14.76□□□□□ -0.05
CLCF1-201ENST00000312438 LRRC28Q86X40 367 aaPredicted RBP14.76□□□□□ -0.05
CLCF1-201ENST00000312438 ELMOD2Q8IZ81 293 aa14.76□□□□□ -0.05
CLCF1-201ENST00000312438 CENPSQ8N2Z9 138 aa14.76□□□□□ -0.05
CLCF1-201ENST00000312438 ZNF433Q8N7K0 673 aaPredicted RBP14.76□□□□□ -0.05
CLCF1-201ENST00000312438 GDPD1Q8N9F7 314 aa14.76□□□□□ -0.05
CLCF1-201ENST00000312438 ZNF837Q96EG3 531 aaPredicted RBP14.76□□□□□ -0.05
CLCF1-201ENST00000312438 SLC25A18Q9H1K4 315 aa14.76□□□□□ -0.05
CLCF1-201ENST00000312438 LIPGQ9Y5X9 500 aa14.76□□□□□ -0.05
CLCF1-201ENST00000312438 NCKAP5O14513 1909 aa14.75□□□□□ -0.05
CLCF1-201ENST00000312438 GVINP1Q7Z2Y8 2422 aa14.75□□□□□ -0.05
CLCF1-201ENST00000312438 ZNF724A8MTY0 619 aa14.75□□□□□ -0.05
CLCF1-201ENST00000312438 GFRA3O60609 400 aa14.75□□□□□ -0.05
CLCF1-201ENST00000312438 CD2P06729 351 aa14.75□□□□□ -0.05
CLCF1-201ENST00000312438 UBCP0CG48 685 aaKnown RBP14.75□□□□□ -0.05
CLCF1-201ENST00000312438 ELK1P19419 428 aa14.75□□□□□ -0.05
CLCF1-201ENST00000312438 CTSSP25774 331 aa14.75□□□□□ -0.05
CLCF1-201ENST00000312438 LRRTM1Q86UE6 522 aa14.75□□□□□ -0.05
CLCF1-201ENST00000312438 LRRC18Q8N456 261 aa14.75□□□□□ -0.05
CLCF1-201ENST00000312438 SAMD12Q8N8I0 201 aa14.75□□□□□ -0.05
CLCF1-201ENST00000312438 MINDY2Q8NBR6 621 aa14.75□□□□□ -0.05
CLCF1-201ENST00000312438 FNDC9Q8TBE3 224 aa14.75□□□□□ -0.05
CLCF1-201ENST00000312438 TRMT10AQ8TBZ6 339 aaKnown RBP14.75□□□□□ -0.05
CLCF1-201ENST00000312438 WDYHV1Q96HA8 205 aa14.75□□□□□ -0.05
CLCF1-201ENST00000312438 GFI1Q99684 422 aa14.75□□□□□ -0.05
CLCF1-201ENST00000312438 PBOV1Q9GZY1 135 aa14.75□□□□□ -0.05
CLCF1-201ENST00000312438 MOB1AQ9H8S9 216 aa14.75□□□□□ -0.05
CLCF1-201ENST00000312438 CYSLTR2Q9NS75 346 aa14.75□□□□□ -0.05
CLCF1-201ENST00000312438 H3BSH0 61 aa14.74□□□□□ -0.05
CLCF1-201ENST00000312438 AIPO00170 330 aa14.74□□□□□ -0.05
CLCF1-201ENST00000312438 TFECO14948 347 aaPredicted RBP14.74□□□□□ -0.05
CLCF1-201ENST00000312438 PAHP00439 452 aa14.74□□□□□ -0.05
CLCF1-201ENST00000312438 SDHBP21912 280 aa14.74□□□□□ -0.05
CLCF1-201ENST00000312438 PSMA6P60900 246 aaKnown RBP14.74□□□□□ -0.05
CLCF1-201ENST00000312438 HIST1H3AP68431 136 aa14.74□□□□□ -0.05
CLCF1-201ENST00000312438 FOXC1Q12948 553 aa14.74□□□□□ -0.05
CLCF1-201ENST00000312438 OXA1LQ15070 435 aa14.74□□□□□ -0.05
CLCF1-201ENST00000312438 RNPS1Q15287 305 aaKnown RBP14.74□□□□□ -0.05
CLCF1-201ENST00000312438 TRIM16LQ309B1 348 aa14.74□□□□□ -0.05
CLCF1-201ENST00000312438 HIST2H3PS2Q5TEC6 136 aa14.74□□□□□ -0.05
CLCF1-201ENST00000312438 HIST2H3AQ71DI3 136 aa14.74□□□□□ -0.05
CLCF1-201ENST00000312438 OR8H2Q8N162 312 aa14.74□□□□□ -0.05
CLCF1-201ENST00000312438 ZADH2Q8N4Q0 377 aa14.74□□□□□ -0.05
CLCF1-201ENST00000312438 CMTM3Q96MX0 182 aa14.74□□□□□ -0.05
CLCF1-201ENST00000312438 MRI1Q9BV20 369 aa14.74□□□□□ -0.05
CLCF1-201ENST00000312438 PPP1R3EQ9H7J1 279 aa14.74□□□□□ -0.05
CLCF1-201ENST00000312438 BCO1Q9HAY6 547 aa14.74□□□□□ -0.05
CLCF1-201ENST00000312438 BRD7Q9NPI1 651 aa14.74□□□□□ -0.05
CLCF1-201ENST00000312438 DDX28Q9NUL7 540 aaKnown RBP14.74□□□□□ -0.05
CLCF1-201ENST00000312438 SPATA2Q9UM82 520 aa14.74□□□□□ -0.05
CLCF1-201ENST00000312438 FOXJ3Q9UPW0 622 aa14.74□□□□□ -0.05
CLCF1-201ENST00000312438 OR6C65A6NJZ3 312 aa14.73□□□□□ -0.05
CLCF1-201ENST00000312438 IGHG3P01860 377 aa14.73□□□□□ -0.05
CLCF1-201ENST00000312438 MAS1P04201 325 aa14.73□□□□□ -0.05
CLCF1-201ENST00000312438 FREM3P0C091 2139 aa14.73□□□□□ -0.05
CLCF1-201ENST00000312438 ZNF24P17028 368 aa14.73□□□□□ -0.05
CLCF1-201ENST00000312438 TALDO1P37837 337 aa14.73□□□□□ -0.05
CLCF1-201ENST00000312438 TUSC5Q8IXB3 177 aa14.73□□□□□ -0.05
CLCF1-201ENST00000312438 ZNF671Q8TAW3 534 aa14.73□□□□□ -0.05
CLCF1-201ENST00000312438 COX4I2Q96KJ9 171 aa14.73□□□□□ -0.05
CLCF1-201ENST00000312438 KCNJ15Q99712 375 aa14.73□□□□□ -0.05
CLCF1-201ENST00000312438 LINC00470Q9BZP3 86 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms