RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 DHRS1Q96LJ7 313 aa16.56■□□□□ 0.24
LIME1-201ENST00000309546 GPA33Q99795 319 aa16.56■□□□□ 0.24
LIME1-201ENST00000309546 GORASP2Q9H8Y8 452 aa16.56■□□□□ 0.24
LIME1-201ENST00000309546 TBCCD1Q9NVR7 557 aa16.56■□□□□ 0.24
LIME1-201ENST00000309546 FBN3Q75N90 2809 aa16.55■□□□□ 0.24
LIME1-201ENST00000309546 DYSFO75923 2080 aa16.55■□□□□ 0.24
LIME1-201ENST00000309546 UBOX5O94941 541 aa16.55■□□□□ 0.24
LIME1-201ENST00000309546 GPANK1O95872 356 aa16.55■□□□□ 0.24
LIME1-201ENST00000309546 PNPP00491 289 aa16.55■□□□□ 0.24
LIME1-201ENST00000309546 IGHV2-5P01817 119 aa16.55■□□□□ 0.24
LIME1-201ENST00000309546 MSX2P35548 267 aaPredicted RBP16.55■□□□□ 0.24
LIME1-201ENST00000309546 CDKN2AP42771 156 aaKnown RBP16.55■□□□□ 0.24
LIME1-201ENST00000309546 LSM6P62312 80 aaKnown RBP16.55■□□□□ 0.24
LIME1-201ENST00000309546 SLC3A1Q07837 685 aa16.55■□□□□ 0.24
LIME1-201ENST00000309546 HNRNPA0Q13151 305 aaKnown RBP16.55■□□□□ 0.24
LIME1-201ENST00000309546 DNM1P34Q6PK57 102 aa16.55■□□□□ 0.24
LIME1-201ENST00000309546 PGAM4Q8N0Y7 254 aa16.55■□□□□ 0.24
LIME1-201ENST00000309546 MCUR1Q96AQ8 359 aa16.55■□□□□ 0.24
LIME1-201ENST00000309546 NSMCE2Q96MF7 247 aa16.55■□□□□ 0.24
LIME1-201ENST00000309546 TSSK2Q96PF2 358 aa16.55■□□□□ 0.24
LIME1-201ENST00000309546 ERMAPQ96PL5 475 aaPredicted RBP16.55■□□□□ 0.24
LIME1-201ENST00000309546 DIRC2Q96SL1 478 aa16.55■□□□□ 0.24
LIME1-201ENST00000309546 FUZQ9BT04 418 aa16.55■□□□□ 0.24
LIME1-201ENST00000309546 UBAP1Q9NZ09 502 aa16.55■□□□□ 0.24
LIME1-201ENST00000309546 PURGQ9UJV8 347 aaKnown RBP16.55■□□□□ 0.24
LIME1-201ENST00000309546 ARPC2O15144 300 aa16.54■□□□□ 0.24
LIME1-201ENST00000309546 RER1O15258 196 aa16.54■□□□□ 0.24
LIME1-201ENST00000309546 PLPP2O43688 288 aa16.54■□□□□ 0.24
LIME1-201ENST00000309546 OR10H3O60404 316 aa16.54■□□□□ 0.24
LIME1-201ENST00000309546 DEAF1O75398 565 aaPredicted RBP16.54■□□□□ 0.24
LIME1-201ENST00000309546 SEMG1P04279 462 aa16.54■□□□□ 0.24
LIME1-201ENST00000309546 ADH4P08319 380 aa16.54■□□□□ 0.24
LIME1-201ENST00000309546 HSD17B1P14061 328 aa16.54■□□□□ 0.24
LIME1-201ENST00000309546 TNFSF4P23510 183 aa16.54■□□□□ 0.24
LIME1-201ENST00000309546 SMIM11AP58511 58 aa16.54■□□□□ 0.24
LIME1-201ENST00000309546 GNGT1P63211 74 aa16.54■□□□□ 0.24
LIME1-201ENST00000309546 MXRA7P84157 204 aa16.54■□□□□ 0.24
LIME1-201ENST00000309546 CCDC92Q53HC0 331 aaPredicted RBP16.54■□□□□ 0.24
LIME1-201ENST00000309546 SAMD4BQ5PRF9 694 aaKnown RBP16.54■□□□□ 0.24
LIME1-201ENST00000309546 PEG10Q86TG7 708 aaKnown RBP16.54■□□□□ 0.24
LIME1-201ENST00000309546 JAZF1Q86VZ6 243 aa16.54■□□□□ 0.24
LIME1-201ENST00000309546 OR2Z1Q8NG97 314 aa16.54■□□□□ 0.24
LIME1-201ENST00000309546 OR1F12Q8NHA8 337 aa16.54■□□□□ 0.24
LIME1-201ENST00000309546 CMBLQ96DG6 245 aa16.54■□□□□ 0.24
LIME1-201ENST00000309546 OR52D1Q9H346 318 aa16.54■□□□□ 0.24
LIME1-201ENST00000309546 DCAF16Q9NXF7 216 aa16.54■□□□□ 0.24
LIME1-201ENST00000309546 TAGLN3Q9UI15 199 aa16.54■□□□□ 0.24
LIME1-201ENST00000309546 KLHL21Q9UJP4 597 aa16.54■□□□□ 0.24
LIME1-201ENST00000309546 STARD10Q9Y365 291 aa16.54■□□□□ 0.24
LIME1-201ENST00000309546 RGS9O75916 674 aaPredicted RBP16.53■□□□□ 0.24
LIME1-201ENST00000309546 TXNDC12O95881 172 aa16.53■□□□□ 0.24
LIME1-201ENST00000309546 FABP3P05413 133 aa16.53■□□□□ 0.24
LIME1-201ENST00000309546 CD55P08174 381 aa16.53■□□□□ 0.24
LIME1-201ENST00000309546 DBHP09172 617 aa16.53■□□□□ 0.24
LIME1-201ENST00000309546 RRM2P31350 389 aa16.53■□□□□ 0.24
LIME1-201ENST00000309546 SLC6A6P31641 620 aa16.53■□□□□ 0.24
LIME1-201ENST00000309546 GYS2P54840 703 aa16.53■□□□□ 0.24
LIME1-201ENST00000309546 MEP1BQ16820 701 aa16.53■□□□□ 0.24
LIME1-201ENST00000309546 LEG1Q6P5S2 330 aa16.53■□□□□ 0.24
LIME1-201ENST00000309546 DCLRE1CQ96SD1 692 aaKnown RBP16.53■□□□□ 0.24
LIME1-201ENST00000309546 CDRT15Q96T59 188 aa16.53■□□□□ 0.24
LIME1-201ENST00000309546 IFT27Q9BW83 186 aa16.53■□□□□ 0.24
LIME1-201ENST00000309546 G6PC2Q9NQR9 355 aa16.53■□□□□ 0.24
LIME1-201ENST00000309546 ARL8BQ9NVJ2 186 aa16.53■□□□□ 0.24
LIME1-201ENST00000309546 PTTG3PQ9NZH4 202 aa16.53■□□□□ 0.24
LIME1-201ENST00000309546 LOC105371242A0A075B767 164 aa16.52■□□□□ 0.24
LIME1-201ENST00000309546 A0A0G2JMP0 313 aa16.52■□□□□ 0.24
LIME1-201ENST00000309546 A0A0X1KG70 313 aa16.52■□□□□ 0.24
LIME1-201ENST00000309546 OR6C6A6NF89 314 aa16.52■□□□□ 0.24
LIME1-201ENST00000309546 DCTN6O00399 190 aa16.52■□□□□ 0.24
LIME1-201ENST00000309546 RENP00797 406 aa16.52■□□□□ 0.24
LIME1-201ENST00000309546 KITLGP21583 273 aa16.52■□□□□ 0.24
LIME1-201ENST00000309546 TUBG1P23258 451 aa16.52■□□□□ 0.24
LIME1-201ENST00000309546 CRABP1P29762 137 aa16.52■□□□□ 0.24
LIME1-201ENST00000309546 RBMXP38159 391 aaKnown RBP16.52■□□□□ 0.24
LIME1-201ENST00000309546 ERFP50548 548 aa16.52■□□□□ 0.24
LIME1-201ENST00000309546 DBPQ10586 325 aaPredicted RBP16.52■□□□□ 0.24
LIME1-201ENST00000309546 CDK5R2Q13319 367 aa16.52■□□□□ 0.24
LIME1-201ENST00000309546 Q6ZR03 302 aa16.52■□□□□ 0.24
LIME1-201ENST00000309546 OR5AS1Q8N127 324 aa16.52■□□□□ 0.24
LIME1-201ENST00000309546 OR4M2Q8NGB6 313 aa16.52■□□□□ 0.24
LIME1-201ENST00000309546 COG8Q96MW5 612 aa16.52■□□□□ 0.24
LIME1-201ENST00000309546 NMNAT3Q96T66 252 aa16.52■□□□□ 0.24
LIME1-201ENST00000309546 SRA1Q9HD15 236 aaKnown RBP16.52■□□□□ 0.24
LIME1-201ENST00000309546 TUBG2Q9NRH3 451 aa16.52■□□□□ 0.24
LIME1-201ENST00000309546 TMCC3Q9ULS5 477 aa16.52■□□□□ 0.24
LIME1-201ENST00000309546 WNK2Q9Y3S1 2297 aa16.51■□□□□ 0.23
LIME1-201ENST00000309546 FPR3P25089 353 aa16.51■□□□□ 0.23
LIME1-201ENST00000309546 NOS3P29474 1203 aa16.51■□□□□ 0.23
LIME1-201ENST00000309546 SCGB2A2Q13296 93 aa16.51■□□□□ 0.23
LIME1-201ENST00000309546 KCNMB1Q16558 191 aa16.51■□□□□ 0.23
LIME1-201ENST00000309546 RFX4Q33E94 735 aa16.51■□□□□ 0.23
LIME1-201ENST00000309546 DCAF12L2Q5VW00 463 aa16.51■□□□□ 0.23
LIME1-201ENST00000309546 PGM2L1Q6PCE3 622 aa16.51■□□□□ 0.23
LIME1-201ENST00000309546 CORO6Q6QEF8 472 aa16.51■□□□□ 0.23
LIME1-201ENST00000309546 C16orf89Q6UX73 402 aa16.51■□□□□ 0.23
LIME1-201ENST00000309546 DEFB107AQ8IZN7 70 aa16.51■□□□□ 0.23
LIME1-201ENST00000309546 OR4K13Q8NH42 304 aa16.51■□□□□ 0.23
LIME1-201ENST00000309546 ST7LQ8TDW4 575 aa16.51■□□□□ 0.23
LIME1-201ENST00000309546 SAMD8Q96LT4 415 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms