RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 MAP3K8P41279 467 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 GPR4P46093 362 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 MECP2P51608 486 aaKnown RBP4.37□□□□□ -1.71
CKS1B-201ENST00000308987 CCR9P51686 369 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 EFNA3P52797 238 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 FXYD6P3P58550 94 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 RAB14P61106 215 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 ADAM8P78325 824 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 DUSP2Q05923 314 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 FOXD4Q12950 439 aaPredicted RBP4.37□□□□□ -1.71
CKS1B-201ENST00000308987 SNTB2Q13425 540 aaKnown RBP4.37□□□□□ -1.71
CKS1B-201ENST00000308987 KLF9Q13886 244 aaPredicted RBP4.37□□□□□ -1.71
CKS1B-201ENST00000308987 KRT33BQ14525 404 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 CDK5R1Q15078 307 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 OR1Q1Q15612 314 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 CDONQ4KMG0 1287 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 NKAIN1Q4KMZ8 207 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 UBE2NLQ5JXB2 153 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 BCL2L15Q5TBC7 163 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 OLFML2AQ68BL7 652 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 FBXO42Q6P3S6 717 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 RPL22L1Q6P5R6 122 aaKnown RBP4.37□□□□□ -1.71
CKS1B-201ENST00000308987 ARL9Q6T311 187 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 SHISA6Q6ZSJ9 500 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 RFPL4BQ6ZWI9 263 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 SHFQ7M4L6 423 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 KCTD20Q7Z5Y7 419 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 UBE2J2Q8N2K1 259 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 ZADH2Q8N4Q0 377 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 C2orf73Q8N5S3 287 aaPredicted RBP4.37□□□□□ -1.71
CKS1B-201ENST00000308987 CDRT4Q8N9R6 151 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 ZNF527Q8NB42 609 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 CLEC1AQ8NC01 280 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 OR7G2Q8NG99 324 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 OR10H4Q8NGA5 316 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 OR11H7Q8NGC8 314 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 OR9A2Q8NGT5 310 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 LCN9Q8WX39 176 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 RAB40AQ8WXH6 277 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 SMPDL3BQ92485 455 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 PSMF1Q92530 271 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 NSMAFQ92636 917 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 THRSPQ92748 146 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 CDS1Q92903 461 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 PTP4A1Q93096 173 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 PHF21AQ96BD5 680 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 BPIFA2Q96DR5 249 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 TM4SF19Q96DZ7 209 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 SMIM19Q96E16 107 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 PGLYRP3Q96LB9 341 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 FER1L6-AS2Q96M78 137 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 ERMAPQ96PL5 475 aaPredicted RBP4.37□□□□□ -1.71
CKS1B-201ENST00000308987 WDR77Q9BQA1 342 aaPredicted RBP4.37□□□□□ -1.71
CKS1B-201ENST00000308987 ZNF426Q9BUY5 554 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 IFT27Q9BW83 186 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 TRIM2Q9C040 744 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 SRMSQ9H3Y6 488 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 RERGLQ9H628 205 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 ISG20L2Q9H9L3 353 aaKnown RBP4.37□□□□□ -1.71
CKS1B-201ENST00000308987 TMEM27Q9HBJ8 222 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 ADGRL4Q9HBW9 690 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 NRIP3Q9NQ35 241 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 CTPS2Q9NRF8 586 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 NUDT15Q9NV35 164 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 SLCO1C1Q9NYB5 712 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 CTSFQ9UBX1 484 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 UBQLN2Q9UHD9 624 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 SLC23A1Q9UHI7 598 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 KIF25Q9UIL4 384 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 MED31Q9Y3C7 131 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 MAB21L2Q9Y586 359 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 FN1P02751 2386 aaKnown RBP4.37□□□□□ -1.71
CKS1B-201ENST00000308987 COL6A5A8TX70 2615 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 NCKAP5O14513 1909 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 FBN1P35555 2871 aaKnown RBP4.36□□□□□ -1.71
CKS1B-201ENST00000308987 A0A0B4J2E0 115 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 A0A0G2JN53 185 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 LOC105371267A0A1B0GV96 52 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 A0A1B0GX12 115 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 RPS10-NUDT3A0A1W2PQS6 291 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 SMIM30A4D0T7 59 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 ZSCAN5BA6NJL1 495 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 OR6C65A6NJZ3 312 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 GLOD5A6NK44 160 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 HSPB2A8KAH6 182 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 GABARAPH6UMI1 98 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 J3QLW9 94 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 ZNF593O00488 134 aaPredicted RBP4.36□□□□□ -1.71
CKS1B-201ENST00000308987 ARPC3O15145 178 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 ZNHIT1O43257 154 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 FRS3O43559 492 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 PIP5K1CO60331 668 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 RGS11O94810 467 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 ZNF432O94892 652 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 OR2A4O95047 310 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 NKX2-2O95096 273 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 NDUFB2O95178 105 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 SLC2A10O95528 541 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 ATP1B1P05026 303 aa4.36□□□□□ -1.71
CKS1B-201ENST00000308987 CELA2AP08217 269 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms