RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 STPG1Q5TH74 334 aa9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 FAAP20Q6NZ36 180 aa9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 NPSR1Q6W5P4 371 aa9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 DPY19L2P2Q6ZN68 376 aa9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 SSX9Q7RTT3 188 aa9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 NPEPL1Q8NDH3 523 aa9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 OR52B4Q8NGK2 314 aa9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 OR5M1Q8NGP8 315 aa9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 OR6N1Q8NGY5 312 aa9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 TCTEX1D2Q8WW35 142 aa9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 PHYHIPLQ96FC7 376 aa9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 PFDN5Q99471 154 aa9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 GINS4Q9BRT9 223 aa9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 OR10A5Q9H207 317 aa9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 AKIRIN1Q9H9L7 192 aaPredicted RBP9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 OCIAD1Q9NX40 245 aa9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 RASL12Q9NYN1 266 aa9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 FXYD6-FXYD2A0A087WZ82 144 aa9.29□□□□□ -0.92
APOBEC3F-201ENST00000308521 TMEM218A2RU14 115 aa9.29□□□□□ -0.92
APOBEC3F-201ENST00000308521 POM121CA8CG34 1229 aa9.29□□□□□ -0.92
APOBEC3F-201ENST00000308521 ARPC3O15145 178 aa9.29□□□□□ -0.92
APOBEC3F-201ENST00000308521 ZFPL1O95159 310 aa9.29□□□□□ -0.92
APOBEC3F-201ENST00000308521 IFNA10P01566 189 aa9.29□□□□□ -0.92
APOBEC3F-201ENST00000308521 ZNF35P13682 527 aa9.29□□□□□ -0.92
APOBEC3F-201ENST00000308521 RAB4AP20338 218 aa9.29□□□□□ -0.92
APOBEC3F-201ENST00000308521 FBLP22087 321 aaKnown RBP9.29□□□□□ -0.92
APOBEC3F-201ENST00000308521 ACAA2P42765 397 aaKnown RBP9.29□□□□□ -0.92
APOBEC3F-201ENST00000308521 CLDN12P56749 244 aa9.29□□□□□ -0.92
APOBEC3F-201ENST00000308521 HSD17B7P56937 341 aa9.29□□□□□ -0.92
APOBEC3F-201ENST00000308521 NANOS3P60323 173 aaKnown RBP9.29□□□□□ -0.92
APOBEC3F-201ENST00000308521 RPS15P62841 145 aaKnown RBP9.29□□□□□ -0.92
APOBEC3F-201ENST00000308521 NSDHLQ15738 373 aa9.29□□□□□ -0.92
APOBEC3F-201ENST00000308521 SSX2Q16385 188 aa9.29□□□□□ -0.92
APOBEC3F-201ENST00000308521 Q499Y3 187 aa9.29□□□□□ -0.92
APOBEC3F-201ENST00000308521 LRRTM1Q86UE6 522 aa9.29□□□□□ -0.92
APOBEC3F-201ENST00000308521 PUSL1Q8N0Z8 303 aaKnown RBP9.29□□□□□ -0.92
APOBEC3F-201ENST00000308521 PTPMT1Q8WUK0 201 aaPredicted RBP9.29□□□□□ -0.92
APOBEC3F-201ENST00000308521 OCSTAMPQ9BR26 566 aa9.29□□□□□ -0.92
APOBEC3F-201ENST00000308521 NRSN2Q9GZP1 204 aa9.29□□□□□ -0.92
APOBEC3F-201ENST00000308521 CHRNA10Q9GZZ6 450 aa9.29□□□□□ -0.92
APOBEC3F-201ENST00000308521 FXYD6Q9H0Q3 95 aa9.29□□□□□ -0.92
APOBEC3F-201ENST00000308521 TMPRSS5Q9H3S3 457 aa9.29□□□□□ -0.92
APOBEC3F-201ENST00000308521 BARX1Q9HBU1 254 aaPredicted RBP9.29□□□□□ -0.92
APOBEC3F-201ENST00000308521 SLC22A11Q9NSA0 550 aa9.29□□□□□ -0.92
APOBEC3F-201ENST00000308521 TRBV5-5A0A0J9YX44 114 aa9.29□□□□□ -0.92
APOBEC3F-201ENST00000308521 C9orf170A2RU37 121 aa9.29□□□□□ -0.92
APOBEC3F-201ENST00000308521 SYNDIG1LA6NDD5 238 aa9.29□□□□□ -0.92
APOBEC3F-201ENST00000308521 C1orf196B1AJZ1 125 aa9.29□□□□□ -0.92
APOBEC3F-201ENST00000308521 GLCEO94923 617 aa9.29□□□□□ -0.92
APOBEC3F-201ENST00000308521 TACSTD2P09758 323 aa9.29□□□□□ -0.92
APOBEC3F-201ENST00000308521 CSRP1P21291 193 aaKnown RBP9.29□□□□□ -0.92
APOBEC3F-201ENST00000308521 VAMP1P23763 118 aa9.29□□□□□ -0.92
APOBEC3F-201ENST00000308521 LAP3P28838 519 aa9.29□□□□□ -0.92
APOBEC3F-201ENST00000308521 AVPR2P30518 371 aa9.29□□□□□ -0.92
APOBEC3F-201ENST00000308521 PMELP40967 661 aa9.29□□□□□ -0.92
APOBEC3F-201ENST00000308521 TOMM20Q15388 145 aa9.29□□□□□ -0.92
APOBEC3F-201ENST00000308521 C2orf68Q2NKX9 166 aa9.29□□□□□ -0.92
APOBEC3F-201ENST00000308521 LANCL3Q6ZV70 420 aa9.29□□□□□ -0.92
APOBEC3F-201ENST00000308521 OR51L1Q8NGJ5 315 aa9.29□□□□□ -0.92
APOBEC3F-201ENST00000308521 OR10K1Q8NGX5 313 aa9.29□□□□□ -0.92
APOBEC3F-201ENST00000308521 ZNRF4Q8WWF5 429 aa9.29□□□□□ -0.92
APOBEC3F-201ENST00000308521 HOXB13Q92826 284 aaPredicted RBP9.29□□□□□ -0.92
APOBEC3F-201ENST00000308521 VSTM2LQ96N03 204 aa9.29□□□□□ -0.92
APOBEC3F-201ENST00000308521 FBXO4Q9UKT5 387 aa9.29□□□□□ -0.92
APOBEC3F-201ENST00000308521 RFPL4AA6NLU0 287 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 RFPL4AL1F8VTS6 287 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 GOSR2O14653 212 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 NKX2-2O95096 273 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 SIX6O95475 246 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 MELTFP08582 738 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 CD63P08962 238 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 CT45A8P0DMV1 189 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 CT45A9P0DMV2 189 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 PTHLHP12272 177 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 CNR1P21554 472 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 CFPP27918 469 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 ITPKBP27987 946 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 MPLP40238 635 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 POU3F4P49335 361 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 CLDN6P56747 220 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 CD81P60033 236 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 SNRPEP62304 92 aaKnown RBP9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 SSBP1Q04837 148 aaKnown RBP9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 CHAF1BQ13112 559 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 CT45A2Q5DJT8 189 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 ALG10BQ5I7T1 473 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 SLC23A3Q6PIS1 610 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 OR4C16Q8NGL9 310 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 THAP6Q8TBB0 222 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 SEMA5BQ9P283 1151 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 OR10H1Q9Y4A9 318 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 AHCTF1Q8WYP5 2266 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 A0A1B0GX78 115 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 ZNF432O94892 652 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 CER1O95813 267 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 GP1BAP07359 652 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 MGMTP16455 207 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 ADRA2CP18825 462 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 IGLV3-21P80748 117 aaPredicted RBP9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 LTBQ06643 244 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms