RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 RAB33BQ9H082 229 aa14.62□□□□□ -0.07
CCDC8-201ENST00000307522 LMAN1LQ9HAT1 526 aa14.62□□□□□ -0.07
CCDC8-201ENST00000307522 FAM60AQ9NP50 221 aa14.62□□□□□ -0.07
CCDC8-201ENST00000307522 SOX15O60248 233 aa14.62□□□□□ -0.07
CCDC8-201ENST00000307522 CSF1P09603 554 aa14.62□□□□□ -0.07
CCDC8-201ENST00000307522 OR8U9P0C7N5 309 aa14.62□□□□□ -0.07
CCDC8-201ENST00000307522 SLC2A5P22732 501 aa14.62□□□□□ -0.07
CCDC8-201ENST00000307522 ZNF136P52737 540 aa14.62□□□□□ -0.07
CCDC8-201ENST00000307522 MRPL2Q5T653 305 aaKnown RBP14.62□□□□□ -0.07
CCDC8-201ENST00000307522 RTN4RL2Q86UN3 420 aa14.62□□□□□ -0.07
CCDC8-201ENST00000307522 NRROSQ86YC3 692 aa14.62□□□□□ -0.07
CCDC8-201ENST00000307522 GVQW1Q8N7I0 195 aa14.62□□□□□ -0.07
CCDC8-201ENST00000307522 AVL9Q8NBF6 648 aa14.62□□□□□ -0.07
CCDC8-201ENST00000307522 TMEM52Q8NDY8 209 aa14.62□□□□□ -0.07
CCDC8-201ENST00000307522 OR2L8Q8NGY9 312 aa14.62□□□□□ -0.07
CCDC8-201ENST00000307522 OR8U1Q8NH10 309 aa14.62□□□□□ -0.07
CCDC8-201ENST00000307522 CD300LFQ8TDQ1 290 aa14.62□□□□□ -0.07
CCDC8-201ENST00000307522 WDR34Q96EX3 536 aa14.62□□□□□ -0.07
CCDC8-201ENST00000307522 MISP3Q96FF7 219 aa14.62□□□□□ -0.07
CCDC8-201ENST00000307522 ZDHHC12Q96GR4 267 aa14.62□□□□□ -0.07
CCDC8-201ENST00000307522 TMEM41AQ96HV5 264 aa14.62□□□□□ -0.07
CCDC8-201ENST00000307522 DCAF16Q9NXF7 216 aa14.62□□□□□ -0.07
CCDC8-201ENST00000307522 METTL1Q9UBP6 276 aaKnown RBP14.62□□□□□ -0.07
CCDC8-201ENST00000307522 PISDQ9UG56 409 aa14.62□□□□□ -0.07
CCDC8-201ENST00000307522 VSIG4Q9Y279 399 aa14.62□□□□□ -0.07
CCDC8-201ENST00000307522 ZNF281Q9Y2X9 895 aa14.62□□□□□ -0.07
CCDC8-201ENST00000307522 DMRT1Q9Y5R6 373 aa14.62□□□□□ -0.07
CCDC8-201ENST00000307522 KIAA1549LQ6ZVL6 1849 aa14.62□□□□□ -0.07
CCDC8-201ENST00000307522 C7orf77A4D0Y5 90 aa14.62□□□□□ -0.07
CCDC8-201ENST00000307522 PPIHO43447 177 aaKnown RBP14.62□□□□□ -0.07
CCDC8-201ENST00000307522 SNRPCP09234 159 aaKnown RBP14.62□□□□□ -0.07
CCDC8-201ENST00000307522 TPT1P13693 172 aaKnown RBP14.62□□□□□ -0.07
CCDC8-201ENST00000307522 MNDAP41218 407 aa14.62□□□□□ -0.07
CCDC8-201ENST00000307522 RPS10P46783 165 aaKnown RBP14.62□□□□□ -0.07
CCDC8-201ENST00000307522 TRMT12Q53H54 448 aaKnown RBP14.62□□□□□ -0.07
CCDC8-201ENST00000307522 RNF44Q7L0R7 432 aa14.62□□□□□ -0.07
CCDC8-201ENST00000307522 GPR148Q8TDV2 347 aa14.62□□□□□ -0.07
CCDC8-201ENST00000307522 COLEC10Q9Y6Z7 277 aa14.62□□□□□ -0.07
CCDC8-201ENST00000307522 MED12Q93074 2177 aa14.61□□□□□ -0.07
CCDC8-201ENST00000307522 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.61□□□□□ -0.07
CCDC8-201ENST00000307522 TMEM235A6NFC5 223 aa14.61□□□□□ -0.07
CCDC8-201ENST00000307522 SHISA7A6NL88 538 aa14.61□□□□□ -0.07
CCDC8-201ENST00000307522 MCIDASD6RGH6 385 aa14.61□□□□□ -0.07
CCDC8-201ENST00000307522 RAB40ALP0C0E4 278 aa14.61□□□□□ -0.07
CCDC8-201ENST00000307522 RAB5AP20339 215 aa14.61□□□□□ -0.07
CCDC8-201ENST00000307522 IL13RA1P78552 427 aa14.61□□□□□ -0.07
CCDC8-201ENST00000307522 ZIC1Q15915 447 aa14.61□□□□□ -0.07
CCDC8-201ENST00000307522 DUSP5Q16690 384 aa14.61□□□□□ -0.07
CCDC8-201ENST00000307522 DEFB133Q30KQ1 61 aa14.61□□□□□ -0.07
CCDC8-201ENST00000307522 TGIF2LXQ8IUE1 241 aa14.61□□□□□ -0.07
CCDC8-201ENST00000307522 RAB40AQ8WXH6 277 aa14.61□□□□□ -0.07
CCDC8-201ENST00000307522 CMBLQ96DG6 245 aa14.61□□□□□ -0.07
CCDC8-201ENST00000307522 EDEM2Q9BV94 578 aa14.61□□□□□ -0.07
CCDC8-201ENST00000307522 MMP26Q9NRE1 261 aa14.61□□□□□ -0.07
CCDC8-201ENST00000307522 AP4M1O00189 453 aa14.61□□□□□ -0.07
CCDC8-201ENST00000307522 XRCC3O43542 346 aa14.61□□□□□ -0.07
CCDC8-201ENST00000307522 IFNA2P01563 188 aa14.61□□□□□ -0.07
CCDC8-201ENST00000307522 CD74P04233 296 aa14.61□□□□□ -0.07
CCDC8-201ENST00000307522 IGHV4-34P06331 123 aa14.61□□□□□ -0.07
CCDC8-201ENST00000307522 NGFRP08138 427 aa14.61□□□□□ -0.07
CCDC8-201ENST00000307522 ITGA5P08648 1049 aa14.61□□□□□ -0.07
CCDC8-201ENST00000307522 PON3Q15166 354 aa14.61□□□□□ -0.07
CCDC8-201ENST00000307522 CDK20Q8IZL9 346 aa14.61□□□□□ -0.07
CCDC8-201ENST00000307522 ZSCAN4Q8NAM6 433 aaPredicted RBP14.61□□□□□ -0.07
CCDC8-201ENST00000307522 FOXRED1Q96CU9 486 aaPredicted RBP14.61□□□□□ -0.07
CCDC8-201ENST00000307522 TIMM29Q9BSF4 260 aa14.61□□□□□ -0.07
CCDC8-201ENST00000307522 SEC61A2Q9H9S3 476 aa14.61□□□□□ -0.07
CCDC8-201ENST00000307522 FSCN3Q9NQT6 498 aa14.61□□□□□ -0.07
CCDC8-201ENST00000307522 DNAJB11Q9UBS4 358 aa14.61□□□□□ -0.07
CCDC8-201ENST00000307522 ELOA3DA6NLF2 546 aaPredicted RBP14.6□□□□□ -0.07
CCDC8-201ENST00000307522 TERTO14746 1132 aaKnown RBP14.6□□□□□ -0.07
CCDC8-201ENST00000307522 ADAP1O75689 374 aa14.6□□□□□ -0.07
CCDC8-201ENST00000307522 PMS2P2O95744 297 aa14.6□□□□□ -0.07
CCDC8-201ENST00000307522 AGAP20933 346 aa14.6□□□□□ -0.07
CCDC8-201ENST00000307522 ITGA3P26006 1051 aa14.6□□□□□ -0.07
CCDC8-201ENST00000307522 MECP2P51608 486 aaKnown RBP14.6□□□□□ -0.07
CCDC8-201ENST00000307522 EEF1A1P68104 462 aaKnown RBP14.6□□□□□ -0.07
CCDC8-201ENST00000307522 KIAA0141Q14154 515 aaPredicted RBP14.6□□□□□ -0.07
CCDC8-201ENST00000307522 MEF2DQ14814 521 aa14.6□□□□□ -0.07
CCDC8-201ENST00000307522 ELOA3BQ3SY89 546 aa14.6□□□□□ -0.07
CCDC8-201ENST00000307522 EEF1A1P5Q5VTE0 462 aa14.6□□□□□ -0.07
CCDC8-201ENST00000307522 FIGLAQ6QHK4 219 aa14.6□□□□□ -0.07
CCDC8-201ENST00000307522 TMEM184AQ6ZMB5 413 aa14.6□□□□□ -0.07
CCDC8-201ENST00000307522 CLEC1AQ8NC01 280 aa14.6□□□□□ -0.07
CCDC8-201ENST00000307522 TMEM104Q8NE00 496 aa14.6□□□□□ -0.07
CCDC8-201ENST00000307522 ELOA3Q8NG57 546 aa14.6□□□□□ -0.07
CCDC8-201ENST00000307522 SLC25A36Q96CQ1 311 aa14.6□□□□□ -0.07
CCDC8-201ENST00000307522 ACTRT3Q9BYD9 372 aa14.6□□□□□ -0.07
CCDC8-201ENST00000307522 TREM2Q9NZC2 230 aa14.6□□□□□ -0.07
CCDC8-201ENST00000307522 CGGBP1Q9UFW8 167 aaPredicted RBP14.6□□□□□ -0.07
CCDC8-201ENST00000307522 FANCMQ8IYD8 2048 aa14.6□□□□□ -0.07
CCDC8-201ENST00000307522 EMC8O43402 210 aa14.6□□□□□ -0.07
CCDC8-201ENST00000307522 RCBTB2O95199 551 aa14.6□□□□□ -0.07
CCDC8-201ENST00000307522 SLC34A2O95436 690 aa14.6□□□□□ -0.07
CCDC8-201ENST00000307522 SERPINF1P36955 418 aa14.6□□□□□ -0.07
CCDC8-201ENST00000307522 HTR5AP47898 357 aa14.6□□□□□ -0.07
CCDC8-201ENST00000307522 CXADRP78310 365 aa14.6□□□□□ -0.07
CCDC8-201ENST00000307522 RUNX2Q13950 521 aa14.6□□□□□ -0.07
CCDC8-201ENST00000307522 MPPED2Q15777 294 aa14.6□□□□□ -0.07
CCDC8-201ENST00000307522 MOGAT2Q3SYC2 334 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms