RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 CNOT1A5YKK6 2376 aaKnown RBP13.14□□□□□ -0.31
PTPN9-201ENST00000306726 TRAV1-2A0A0B4J238 106 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 KLF4O43474 513 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 PTP4A3O75365 173 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 CSF1P09603 554 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 ZP3P21754 424 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 FXYD4P59646 89 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 MFGE8Q08431 387 aaPredicted RBP13.14□□□□□ -0.31
PTPN9-201ENST00000306726 PPP1R1AQ13522 171 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 DCXRQ7Z4W1 244 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 PXKQ7Z7A4 578 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 UBL7Q96S82 380 aaPredicted RBP13.14□□□□□ -0.31
PTPN9-201ENST00000306726 RPS10P5Q9NQ39 176 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 CHRNA9Q9UGM1 479 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 A0A1W2PP11 408 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 G3V3Y1 287 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 SSX5O60225 188 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 WNT11O96014 354 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 HLA-DOBP13765 273 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 OR2B8PP59922 312 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 BRICD5Q6PL45 260 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 DPY19L2P2Q6ZN68 376 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 OR1J4Q8NGS1 313 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 TIMM29Q9BSF4 260 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 BCL2L14Q9BZR8 327 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 LOC101059948A0A1B0GTJ6 334 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 WISP1O95388 367 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 S100A9P06702 114 aaKnown RBP13.14□□□□□ -0.31
PTPN9-201ENST00000306726 BDH1Q02338 343 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 PMPCAQ10713 525 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 NHLRC3Q5JS37 347 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 ZNF425Q6IV72 752 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 KLHL24Q6TFL4 600 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 NPSR1Q6W5P4 371 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 TMEM151BQ8IW70 566 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 LHFPL5Q8TAF8 219 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 NPAS1Q99742 590 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 CST11Q9H112 138 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 NAP1L6A6NFF2 107 aa13.13□□□□□ -0.31
PTPN9-201ENST00000306726 GPRIN2O60269 458 aa13.13□□□□□ -0.31
PTPN9-201ENST00000306726 GALR3O60755 368 aaPredicted RBP13.13□□□□□ -0.31
PTPN9-201ENST00000306726 THBS1P07996 1170 aa13.13□□□□□ -0.31
PTPN9-201ENST00000306726 SERPINF1P36955 418 aa13.13□□□□□ -0.31
PTPN9-201ENST00000306726 PLCXD2Q0VAA5 305 aa13.13□□□□□ -0.31
PTPN9-201ENST00000306726 PDZD11Q5EBL8 140 aa13.13□□□□□ -0.31
PTPN9-201ENST00000306726 RGS7BPQ6MZT1 257 aaPredicted RBP13.13□□□□□ -0.31
PTPN9-201ENST00000306726 ZNF578Q96N58 590 aaPredicted RBP13.13□□□□□ -0.31
PTPN9-201ENST00000306726 RSRP1Q9BUV0 290 aa13.13□□□□□ -0.31
PTPN9-201ENST00000306726 FOXQ1Q9C009 403 aa13.13□□□□□ -0.31
PTPN9-201ENST00000306726 B3GALT1Q9Y5Z6 326 aa13.13□□□□□ -0.31
PTPN9-201ENST00000306726 ZNF106Q9H2Y7 1883 aaKnown RBP13.13□□□□□ -0.31
PTPN9-201ENST00000306726 M0R296 226 aa13.13□□□□□ -0.31
PTPN9-201ENST00000306726 SULT1C2O00338 296 aa13.13□□□□□ -0.31
PTPN9-201ENST00000306726 SGCEO43556 437 aa13.13□□□□□ -0.31
PTPN9-201ENST00000306726 ICOSLGO75144 302 aa13.13□□□□□ -0.31
PTPN9-201ENST00000306726 CRTAPO75718 401 aaPredicted RBP13.13□□□□□ -0.31
PTPN9-201ENST00000306726 TGM6O95932 706 aa13.13□□□□□ -0.31
PTPN9-201ENST00000306726 HOXC4P09017 264 aaPredicted RBP13.13□□□□□ -0.31
PTPN9-201ENST00000306726 CD80P33681 288 aa13.13□□□□□ -0.31
PTPN9-201ENST00000306726 ALG11Q2TAA5 492 aa13.13□□□□□ -0.31
PTPN9-201ENST00000306726 PLEKHN1Q494U1 663 aaPredicted RBP13.13□□□□□ -0.31
PTPN9-201ENST00000306726 TMEM92Q6UXU6 159 aa13.13□□□□□ -0.31
PTPN9-201ENST00000306726 FJX1Q86VR8 437 aa13.13□□□□□ -0.31
PTPN9-201ENST00000306726 ADAD2Q8NCV1 583 aaKnown RBP13.13□□□□□ -0.31
PTPN9-201ENST00000306726 OR1S1Q8NH92 325 aa13.13□□□□□ -0.31
PTPN9-201ENST00000306726 S100A13Q99584 98 aa13.13□□□□□ -0.31
PTPN9-201ENST00000306726 TMEM272A0A1B0GTI8 110 aa13.13□□□□□ -0.31
PTPN9-201ENST00000306726 NPIPA5E9PKD4 350 aa13.13□□□□□ -0.31
PTPN9-201ENST00000306726 GP1BBP13224 206 aa13.13□□□□□ -0.31
PTPN9-201ENST00000306726 ZNF20P17024 532 aa13.13□□□□□ -0.31
PTPN9-201ENST00000306726 PRPS1P60891 318 aa13.13□□□□□ -0.31
PTPN9-201ENST00000306726 SRSF3P84103 164 aaKnown RBP13.13□□□□□ -0.31
PTPN9-201ENST00000306726 SMCO1Q147U7 214 aa13.13□□□□□ -0.31
PTPN9-201ENST00000306726 FAM76BQ5HYJ3 339 aa13.13□□□□□ -0.31
PTPN9-201ENST00000306726 STOML3Q8TAV4 291 aa13.13□□□□□ -0.31
PTPN9-201ENST00000306726 NPIPA1Q9UND3 350 aa13.13□□□□□ -0.31
PTPN9-201ENST00000306726 ZNF318Q5VUA4 2279 aa13.12□□□□□ -0.31
PTPN9-201ENST00000306726 TEX13DA0A0J9YY54 714 aaPredicted RBP13.12□□□□□ -0.31
PTPN9-201ENST00000306726 METTL21EPA6NDL7 271 aa13.12□□□□□ -0.31
PTPN9-201ENST00000306726 F5H5K5 113 aa13.12□□□□□ -0.31
PTPN9-201ENST00000306726 OGG1O15527 345 aa13.12□□□□□ -0.31
PTPN9-201ENST00000306726 ZNF254O75437 659 aa13.12□□□□□ -0.31
PTPN9-201ENST00000306726 STK17BO94768 372 aa13.12□□□□□ -0.31
PTPN9-201ENST00000306726 THEGLP0DJG4 465 aa13.12□□□□□ -0.31
PTPN9-201ENST00000306726 CTLA4P16410 223 aa13.12□□□□□ -0.31
PTPN9-201ENST00000306726 IL11P20809 199 aa13.12□□□□□ -0.31
PTPN9-201ENST00000306726 SNTB1Q13884 538 aaKnown RBP13.12□□□□□ -0.31
PTPN9-201ENST00000306726 ZNF658BQ4V348 819 aaPredicted RBP13.12□□□□□ -0.31
PTPN9-201ENST00000306726 SLC18B1Q6NT16 456 aa13.12□□□□□ -0.31
PTPN9-201ENST00000306726 ABHD12BQ7Z5M8 362 aaPredicted RBP13.12□□□□□ -0.31
PTPN9-201ENST00000306726 CADM4Q8NFZ8 388 aa13.12□□□□□ -0.31
PTPN9-201ENST00000306726 ZNF587Q96SQ5 575 aaPredicted RBP13.12□□□□□ -0.31
PTPN9-201ENST00000306726 EIF5A2Q9GZV4 153 aaKnown RBP13.12□□□□□ -0.31
PTPN9-201ENST00000306726 GPN3Q9UHW5 284 aaPredicted RBP13.12□□□□□ -0.31
PTPN9-201ENST00000306726 OR6C76A6NM76 312 aa13.12□□□□□ -0.31
PTPN9-201ENST00000306726 UTS2O95399 124 aa13.12□□□□□ -0.31
PTPN9-201ENST00000306726 HSD11B1P28845 292 aa13.12□□□□□ -0.31
PTPN9-201ENST00000306726 CDAP32320 146 aa13.12□□□□□ -0.31
PTPN9-201ENST00000306726 PDZK1IP1Q13113 114 aa13.12□□□□□ -0.31
PTPN9-201ENST00000306726 SERTAD2Q14140 314 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms