RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 P4HA3Q7Z4N8 544 aa12.03□□□□□ -0.48
DDX54-201ENST00000306014 LINC00052Q96N35 136 aa12.03□□□□□ -0.48
DDX54-201ENST00000306014 CMSS1Q9BQ75 279 aaKnown RBP12.03□□□□□ -0.48
DDX54-201ENST00000306014 CHRDQ9H2X0 955 aa12.03□□□□□ -0.48
DDX54-201ENST00000306014 GHITMQ9H3K2 345 aa12.03□□□□□ -0.48
DDX54-201ENST00000306014 FGF21Q9NSA1 209 aa12.03□□□□□ -0.48
DDX54-201ENST00000306014 HAO2Q9NYQ3 351 aa12.03□□□□□ -0.48
DDX54-201ENST00000306014 SDCBPO00560 298 aaPredicted RBP12.03□□□□□ -0.48
DDX54-201ENST00000306014 LAMTOR5O43504 91 aa12.03□□□□□ -0.48
DDX54-201ENST00000306014 EIF4E2O60573 245 aaKnown RBP12.03□□□□□ -0.48
DDX54-201ENST00000306014 ALOX5APP20292 161 aa12.03□□□□□ -0.48
DDX54-201ENST00000306014 EPHA4P54764 986 aa12.03□□□□□ -0.48
DDX54-201ENST00000306014 ELAVL1Q15717 326 aaKnown RBP12.03□□□□□ -0.48
DDX54-201ENST00000306014 AKR1C8PQ5T2L2 129 aa12.03□□□□□ -0.48
DDX54-201ENST00000306014 AVPI1Q5T686 147 aa12.03□□□□□ -0.48
DDX54-201ENST00000306014 GPR157Q5UAW9 335 aa12.03□□□□□ -0.48
DDX54-201ENST00000306014 CD200R1LQ6Q8B3 271 aa12.03□□□□□ -0.48
DDX54-201ENST00000306014 KCNRGQ8N5I3 272 aa12.03□□□□□ -0.48
DDX54-201ENST00000306014 CCDC71LQ8N9Z2 235 aa12.03□□□□□ -0.48
DDX54-201ENST00000306014 TEX19Q8NA77 164 aa12.03□□□□□ -0.48
DDX54-201ENST00000306014 FAM174AQ8TBP5 190 aa12.03□□□□□ -0.48
DDX54-201ENST00000306014 OR51E1Q8TCB6 317 aa12.03□□□□□ -0.48
DDX54-201ENST00000306014 MARCH1Q8TCQ1 289 aa12.03□□□□□ -0.48
DDX54-201ENST00000306014 CXorf58Q96LI9 332 aa12.03□□□□□ -0.48
DDX54-201ENST00000306014 OR10A2Q9H208 303 aa12.03□□□□□ -0.48
DDX54-201ENST00000306014 TCEAL2Q9H3H9 227 aaPredicted RBP12.03□□□□□ -0.48
DDX54-201ENST00000306014 ZNF768Q9H5H4 540 aaKnown RBP12.03□□□□□ -0.48
DDX54-201ENST00000306014 LUZP4Q9P127 313 aa12.03□□□□□ -0.48
DDX54-201ENST00000306014 SUSD2Q9UGT4 822 aa12.03□□□□□ -0.48
DDX54-201ENST00000306014 IGKV1-8A0A0C4DH67 115 aa12.03□□□□□ -0.48
DDX54-201ENST00000306014 ANKRD20A5PA0PJZ0 165 aa12.03□□□□□ -0.48
DDX54-201ENST00000306014 MOSPD3O75425 235 aa12.03□□□□□ -0.48
DDX54-201ENST00000306014 IL33O95760 270 aa12.03□□□□□ -0.48
DDX54-201ENST00000306014 ZGLP1P0C6A0 271 aa12.03□□□□□ -0.48
DDX54-201ENST00000306014 GLI4P10075 376 aa12.03□□□□□ -0.48
DDX54-201ENST00000306014 MTCP1P56278 107 aa12.03□□□□□ -0.48
DDX54-201ENST00000306014 PDZK1IP1Q13113 114 aa12.03□□□□□ -0.48
DDX54-201ENST00000306014 C5orf46Q6UWT4 87 aa12.03□□□□□ -0.48
DDX54-201ENST00000306014 SPICQ8N5J4 248 aa12.03□□□□□ -0.48
DDX54-201ENST00000306014 PFDN5Q99471 154 aa12.03□□□□□ -0.48
DDX54-201ENST00000306014 KCNK15Q9H427 330 aa12.03□□□□□ -0.48
DDX54-201ENST00000306014 UNKLQ9H9P5 680 aaKnown RBP12.03□□□□□ -0.48
DDX54-201ENST00000306014 KCNS2Q9ULS6 477 aa12.03□□□□□ -0.48
DDX54-201ENST00000306014 HS3ST3A1Q9Y663 406 aa12.03□□□□□ -0.48
DDX54-201ENST00000306014 TCRBV16S1A1N1A0A5B0 115 aa12.02□□□□□ -0.48
DDX54-201ENST00000306014 RFPL4AA6NLU0 287 aa12.02□□□□□ -0.48
DDX54-201ENST00000306014 RFPL4AL1F8VTS6 287 aa12.02□□□□□ -0.48
DDX54-201ENST00000306014 CHRM2P08172 466 aa12.02□□□□□ -0.48
DDX54-201ENST00000306014 GABREP78334 506 aa12.02□□□□□ -0.48
DDX54-201ENST00000306014 OR1M1Q8NGA1 313 aa12.02□□□□□ -0.48
DDX54-201ENST00000306014 OR52N5Q8NH56 324 aa12.02□□□□□ -0.48
DDX54-201ENST00000306014 OTOSQ8NHW6 89 aa12.02□□□□□ -0.48
DDX54-201ENST00000306014 MOGAT1Q96PD6 335 aa12.02□□□□□ -0.48
DDX54-201ENST00000306014 OR8B4Q96RC9 309 aa12.02□□□□□ -0.48
DDX54-201ENST00000306014 SRPK3Q9UPE1 567 aa12.02□□□□□ -0.48
DDX54-201ENST00000306014 LINC00862A6NCI5 91 aa12.02□□□□□ -0.49
DDX54-201ENST00000306014 CBX7O95931 251 aa12.02□□□□□ -0.49
DDX54-201ENST00000306014 CLDN17P56750 224 aa12.02□□□□□ -0.49
DDX54-201ENST00000306014 BAMBIQ13145 260 aa12.02□□□□□ -0.49
DDX54-201ENST00000306014 KLF9Q13886 244 aaPredicted RBP12.02□□□□□ -0.49
DDX54-201ENST00000306014 OR52W1Q6IF63 320 aa12.02□□□□□ -0.49
DDX54-201ENST00000306014 CBLN3Q6UW01 205 aa12.02□□□□□ -0.49
DDX54-201ENST00000306014 WDR88Q6ZMY6 472 aa12.02□□□□□ -0.49
DDX54-201ENST00000306014 RFLNBQ8N5W9 214 aa12.02□□□□□ -0.49
DDX54-201ENST00000306014 PIGTQ969N2 578 aa12.02□□□□□ -0.49
DDX54-201ENST00000306014 ZNF707Q96C28 371 aaPredicted RBP12.02□□□□□ -0.49
DDX54-201ENST00000306014 LAT2Q9GZY6 243 aa12.02□□□□□ -0.49
DDX54-201ENST00000306014 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.02□□□□□ -0.49
DDX54-201ENST00000306014 C1orf123Q9NWV4 160 aa12.02□□□□□ -0.49
DDX54-201ENST00000306014 NTMQ9P121 344 aa12.02□□□□□ -0.49
DDX54-201ENST00000306014 ELF5Q9UKW6 265 aaPredicted RBP12.02□□□□□ -0.49
DDX54-201ENST00000306014 CES1P1Q9UKY3 287 aa12.02□□□□□ -0.49
DDX54-201ENST00000306014 CTAG2O75638 210 aa12.02□□□□□ -0.49
DDX54-201ENST00000306014 EPHA1P21709 976 aa12.02□□□□□ -0.49
DDX54-201ENST00000306014 OMGP23515 440 aa12.02□□□□□ -0.49
DDX54-201ENST00000306014 CSNK1EP49674 416 aaKnown RBP12.02□□□□□ -0.49
DDX54-201ENST00000306014 ACY1Q03154 408 aa12.02□□□□□ -0.49
DDX54-201ENST00000306014 RBM39Q14498 530 aaKnown RBP12.02□□□□□ -0.49
DDX54-201ENST00000306014 HSD17B11Q8NBQ5 300 aa12.02□□□□□ -0.49
DDX54-201ENST00000306014 GPR119Q8TDV5 335 aa12.02□□□□□ -0.49
DDX54-201ENST00000306014 SLAMF6Q96DU3 332 aa12.02□□□□□ -0.49
DDX54-201ENST00000306014 C4orf45Q96LM5 186 aa12.02□□□□□ -0.49
DDX54-201ENST00000306014 YBX2Q9Y2T7 364 aaKnown RBP12.02□□□□□ -0.49
DDX54-201ENST00000306014 PCDHGA1Q9Y5H4 931 aa12.02□□□□□ -0.49
DDX54-201ENST00000306014 PUS1Q9Y606 427 aaKnown RBP eCLIP12.02□□□□□ -0.49
DDX54-201ENST00000306014 SHISA3A0PJX4 238 aa12.02□□□□□ -0.49
DDX54-201ENST00000306014 EML2O95834 649 aa12.02□□□□□ -0.49
DDX54-201ENST00000306014 IFNA17P01571 189 aa12.02□□□□□ -0.49
DDX54-201ENST00000306014 DBHP09172 617 aa12.02□□□□□ -0.49
DDX54-201ENST00000306014 ANKRD34CP0C6C1 535 aa12.02□□□□□ -0.49
DDX54-201ENST00000306014 CX3CR1P49238 355 aa12.02□□□□□ -0.49
DDX54-201ENST00000306014 PPP1CAP62136 330 aa12.02□□□□□ -0.49
DDX54-201ENST00000306014 C19orf48Q6RUI8 117 aa12.02□□□□□ -0.49
DDX54-201ENST00000306014 LSMEM1Q8N8F7 131 aa12.02□□□□□ -0.49
DDX54-201ENST00000306014 CNTNAP3Q9BZ76 1288 aa12.02□□□□□ -0.49
DDX54-201ENST00000306014 ULBP2Q9BZM5 246 aa12.02□□□□□ -0.49
DDX54-201ENST00000306014 TXNIPQ9H3M7 391 aa12.02□□□□□ -0.49
DDX54-201ENST00000306014 FAM212BQ9NTI7 297 aaPredicted RBP12.02□□□□□ -0.49
DDX54-201ENST00000306014 CHRNA9Q9UGM1 479 aa12.02□□□□□ -0.49
DDX54-201ENST00000306014 SCN2AQ99250 2005 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms