RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 LPAR4Q99677 370 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 GINS4Q9BRT9 223 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 CST11Q9H112 138 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 MKL2Q9ULH7 1088 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 TMED7Q9Y3B3 224 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 A0A0D9SG52 128 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 A0A1W2PNV4 684 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 OR6C74A6NCV1 312 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 ALG1L2C9J202 215 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 PSMD9O00233 223 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 FADS1O60427 444 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 OR8G3PP0DMU2 310 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 NFYBP25208 207 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 KCNJ3P48549 501 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 CAPZA1P52907 286 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 SUMO3P55854 103 aaPredicted RBP4.85□□□□□ -1.63
VPS50-202ENST00000305866 AP3S2P59780 193 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 ACTR1AP61163 376 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 SKP1P63208 163 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 RASGEF1BQ0VAM2 473 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 TOMM34Q15785 309 aaPredicted RBP4.85□□□□□ -1.63
VPS50-202ENST00000305866 KCNMB1Q16558 191 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 PCGF3Q3KNV8 242 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 DEFB134Q4QY38 66 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 C3orf33Q6P1S2 294 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 FAHD2BQ6P2I3 314 aaPredicted RBP4.85□□□□□ -1.63
VPS50-202ENST00000305866 TMEM92Q6UXU6 159 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 LUZP2Q86TE4 346 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 KMT5CQ86Y97 462 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 OR4D6Q8NGJ1 314 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 CCL4L1Q8NHW4 92 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 OTOSQ8NHW6 89 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 DOK4Q8TEW6 326 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 RERGQ96A58 199 aaPredicted RBP4.85□□□□□ -1.63
VPS50-202ENST00000305866 FAHD2AQ96GK7 314 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 AQP10Q96PS8 301 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 NRIP2Q9BQI9 281 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 SLC6A15Q9H2J7 730 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 SLCO5A1Q9H2Y9 848 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 FAM60AQ9NP50 221 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 MKKSQ9NPJ1 570 aaPredicted RBP4.85□□□□□ -1.63
VPS50-202ENST00000305866 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.85□□□□□ -1.63
VPS50-202ENST00000305866 TAS2R8Q9NYW2 309 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 ASH2LQ9UBL3 628 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 GNG8Q9UK08 70 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 TMEM14DPA8MWL7 114 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 E9PLN8 166 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 NUDT21O43809 227 aaKnown RBP4.85□□□□□ -1.63
VPS50-202ENST00000305866 RAD51DO75771 328 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 CRHP06850 196 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 CA3P07451 260 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 MYOGP15173 224 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 EDNRAP25101 427 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 POU3F4P49335 361 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 FNTBP49356 437 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 PPP1R1AQ13522 171 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 TMEM225Q6GV28 225 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 ABLIM2Q6H8Q1 611 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 STEAP1BQ6NZ63 245 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 FIGNL1Q6PIW4 674 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 LRRC69Q6ZNQ3 347 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 FOXL2NBQ6ZUU3 175 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 KDF1Q8NAX2 398 aaPredicted RBP4.85□□□□□ -1.63
VPS50-202ENST00000305866 POC1AQ8NBT0 407 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 OR51D1Q8NGF3 324 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 OR2I1PQ8NGU4 316 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 OR14C36Q8NHC7 312 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 OR8B4Q96RC9 309 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 C12orf57Q99622 126 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 NMES1Q9C002 83 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 ARL6Q9H0F7 186 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 PIGMQ9H3S5 423 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 C5orf66Q9H5L9 145 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 UBQLN4Q9NRR5 601 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 IGKV1D-43A0A0B4J1Z2 117 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 LOC100289279A0A1B0GTE1 492 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 TMEM72A0PK05 275 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 LRRC72A6NJI9 287 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 TOX3O15405 576 aaPredicted RBP4.85□□□□□ -1.63
VPS50-202ENST00000305866 TSPAN9O75954 239 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 SPDEFO95238 335 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 TACSTD2P09758 323 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 AKAIN1P0CW23 69 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 NAT2P11245 290 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 NME1P15531 152 aaKnown RBP4.85□□□□□ -1.63
VPS50-202ENST00000305866 CD1CP29017 333 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 GDI1P31150 447 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 LTBRP36941 435 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 P2RY4P51582 365 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 PPP1CAP62136 330 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 TDGQ13569 410 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 PON3Q15166 354 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 PLAC9Q5JTB6 97 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 CDPF1Q6NVV7 123 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 LPCAT3Q6P1A2 487 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 ENPP7Q6UWV6 458 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 ACOT7LQ6ZUV0 252 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 SLC29A4Q7RTT9 530 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 LYG2Q86SG7 212 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 PLPP5Q8NEB5 264 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms