RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 FAM240BA0A1B0GVZ2 78 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 LOC107986453A0A1B0GWG9 222 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 ANXA2P2A6NMY6 339 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 ZNF726A6NNF4 738 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 C21orf140B9A014 251 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 TNFSF15O95150 251 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 TTRP02766 147 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 ANXA2P07355 339 aaKnown RBP5.8□□□□□ -1.48
USP47-201ENST00000305481 CD96P40200 585 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 INPP1P49441 399 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 CYB561P49447 251 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 EFNB2P52799 333 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 SUCLG1P53597 346 aaKnown RBP5.8□□□□□ -1.48
USP47-201ENST00000305481 CLDN15P56746 228 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 EIF3IQ13347 325 aaKnown RBP5.8□□□□□ -1.48
USP47-201ENST00000305481 KCNMB1Q16558 191 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 TMEM164Q5U3C3 297 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 ZNF544Q6NX49 715 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 TMEM123Q8N131 208 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 PLPP7Q8NBV4 271 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 OR10H5Q8NGA6 315 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 OR9K2Q8NGE7 335 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 OR51A2Q8NGJ7 313 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 SMIM4Q8WVI0 70 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 SLC25A28Q96A46 364 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 C1orf198Q9H425 327 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 KCNK15Q9H427 330 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 PARD6AQ9NPB6 346 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 TAS2R4Q9NYW5 299 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 GLTPQ9NZD2 209 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 ASH2LQ9UBL3 628 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 STEAP1Q9UHE8 339 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 PCDHGA1Q9Y5H4 931 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 EP300Q09472 2414 aaPredicted RBP5.8□□□□□ -1.48
USP47-201ENST00000305481 ZNF318Q5VUA4 2279 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 CFAP47Q6ZTR5 3102 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 P2RY10O00398 339 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 SMAD9O15198 467 aaKnown RBP5.8□□□□□ -1.48
USP47-201ENST00000305481 RER1O15258 196 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 ORC5O43913 435 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 EIF1BO60739 113 aaKnown RBP5.8□□□□□ -1.48
USP47-201ENST00000305481 CCNKO75909 580 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 NEURL1O76050 574 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 CDK2P24941 298 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 PITPNAQ00169 270 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 KLF9Q13886 244 aaPredicted RBP5.8□□□□□ -1.48
USP47-201ENST00000305481 POU4F3Q15319 338 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 TATDN3Q17R31 274 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 PLET1Q6UQ28 207 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 KRT74Q7RTS7 529 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.8□□□□□ -1.48
USP47-201ENST00000305481 SIAH3Q8IW03 269 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 TMEM54Q969K7 222 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 HAVCR1Q96D42 359 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 ST6GAL2Q96JF0 529 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 SIGLEC12Q96PQ1 595 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 MRI1Q9BV20 369 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 HHLA2Q9UM44 414 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 CACNG2Q9Y698 323 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 ARPC4-TTLL3A0A0A6YYG9 625 aa5.79□□□□□ -1.48
USP47-201ENST00000305481 A8MV72 311 aaPredicted RBP5.79□□□□□ -1.48
USP47-201ENST00000305481 ACSM4P0C7M7 580 aa5.79□□□□□ -1.48
USP47-201ENST00000305481 DCTDP32321 178 aa5.79□□□□□ -1.48
USP47-201ENST00000305481 STARP49675 285 aa5.79□□□□□ -1.48
USP47-201ENST00000305481 SELENOPP49908 381 aa5.79□□□□□ -1.48
USP47-201ENST00000305481 ZNF133P52736 654 aaPredicted RBP5.79□□□□□ -1.48
USP47-201ENST00000305481 NKX2-5P52952 324 aaPredicted RBP5.79□□□□□ -1.48
USP47-201ENST00000305481 ART1P52961 327 aa5.79□□□□□ -1.48
USP47-201ENST00000305481 OC90Q02509 493 aaPredicted RBP5.79□□□□□ -1.48
USP47-201ENST00000305481 TRIP6Q15654 476 aaKnown RBP5.79□□□□□ -1.48
USP47-201ENST00000305481 WIPI1Q5MNZ9 446 aaPredicted RBP5.79□□□□□ -1.48
USP47-201ENST00000305481 DCAF10Q5QP82 559 aa5.79□□□□□ -1.48
USP47-201ENST00000305481 RSBN1Q5VWQ0 802 aaPredicted RBP5.79□□□□□ -1.48
USP47-201ENST00000305481 BAIAP2L2Q6UXY1 529 aa5.79□□□□□ -1.48
USP47-201ENST00000305481 HDDC2Q7Z4H3 204 aa5.79□□□□□ -1.48
USP47-201ENST00000305481 PIP4P1Q86T03 277 aa5.79□□□□□ -1.48
USP47-201ENST00000305481 LYPD6Q86Y78 171 aa5.79□□□□□ -1.48
USP47-201ENST00000305481 OR51D1Q8NGF3 324 aa5.79□□□□□ -1.48
USP47-201ENST00000305481 OR13C3Q8NGS6 347 aa5.79□□□□□ -1.48
USP47-201ENST00000305481 OR14L1PQ8NHC6 308 aa5.79□□□□□ -1.48
USP47-201ENST00000305481 ZNF837Q96EG3 531 aaPredicted RBP5.79□□□□□ -1.48
USP47-201ENST00000305481 S100A16Q96FQ6 103 aaKnown RBP5.79□□□□□ -1.48
USP47-201ENST00000305481 PBOV1Q9GZY1 135 aa5.79□□□□□ -1.48
USP47-201ENST00000305481 RYDENQ9NUL5 291 aaKnown RBP5.79□□□□□ -1.48
USP47-201ENST00000305481 ZNF319Q9P2F9 582 aa5.79□□□□□ -1.48
USP47-201ENST00000305481 FOXD3Q9UJU5 478 aaPredicted RBP5.79□□□□□ -1.48
USP47-201ENST00000305481 ETV7Q9Y603 341 aa5.79□□□□□ -1.48
USP47-201ENST00000305481 ALG5Q9Y673 324 aa5.79□□□□□ -1.48
USP47-201ENST00000305481 HMX3A6NHT5 357 aa5.79□□□□□ -1.48
USP47-201ENST00000305481 TTLL8A6PVC2 850 aa5.79□□□□□ -1.48
USP47-201ENST00000305481 WDPCPO95876 746 aa5.79□□□□□ -1.48
USP47-201ENST00000305481 FSTP19883 344 aa5.79□□□□□ -1.48
USP47-201ENST00000305481 CNR1P21554 472 aa5.79□□□□□ -1.48
USP47-201ENST00000305481 ACHEP22303 614 aa5.79□□□□□ -1.48
USP47-201ENST00000305481 CSNK2A1P68400 391 aaPredicted RBP5.79□□□□□ -1.48
USP47-201ENST00000305481 BCL2L15Q5TBC7 163 aa5.79□□□□□ -1.48
USP47-201ENST00000305481 HACD4Q5VWC8 232 aa5.79□□□□□ -1.48
USP47-201ENST00000305481 LINGO2Q7L985 606 aa5.79□□□□□ -1.48
USP47-201ENST00000305481 ELMOD2Q8IZ81 293 aa5.79□□□□□ -1.48
USP47-201ENST00000305481 OR52I2Q8NH67 350 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms