RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 HHLA2Q9UM44 414 aa12.7□□□□□ -0.38
RAB40A-201ENST00000304236 PPIEQ9UNP9 301 aaKnown RBP12.7□□□□□ -0.38
RAB40A-201ENST00000304236 FER1L5A0AVI2 2057 aa12.7□□□□□ -0.38
RAB40A-201ENST00000304236 ZFYVE26Q68DK2 2539 aa12.69□□□□□ -0.38
RAB40A-201ENST00000304236 ALPK2Q86TB3 2170 aa12.69□□□□□ -0.38
RAB40A-201ENST00000304236 A0A0A6YYH2 397 aa12.69□□□□□ -0.38
RAB40A-201ENST00000304236 A6NJ64 397 aa12.69□□□□□ -0.38
RAB40A-201ENST00000304236 MS4A18H0YCH9 400 aa12.69□□□□□ -0.38
RAB40A-201ENST00000304236 MT-CO3P00414 261 aa12.69□□□□□ -0.38
RAB40A-201ENST00000304236 ISG15P05161 165 aa12.69□□□□□ -0.38
RAB40A-201ENST00000304236 HEXBP07686 556 aa12.69□□□□□ -0.38
RAB40A-201ENST00000304236 GIMD1P0DJR0 217 aa12.69□□□□□ -0.38
RAB40A-201ENST00000304236 MSX1P28360 303 aa12.69□□□□□ -0.38
RAB40A-201ENST00000304236 DUSP3P51452 185 aaPredicted RBP12.69□□□□□ -0.38
RAB40A-201ENST00000304236 ACTBP60709 375 aa12.69□□□□□ -0.38
RAB40A-201ENST00000304236 ACTG1P63261 375 aa12.69□□□□□ -0.38
RAB40A-201ENST00000304236 PLA2G7Q13093 441 aa12.69□□□□□ -0.38
RAB40A-201ENST00000304236 SNTA1Q13424 505 aa12.69□□□□□ -0.38
RAB40A-201ENST00000304236 MS4A18Q3C1V0 323 aa12.69□□□□□ -0.38
RAB40A-201ENST00000304236 LYPD8Q6UX82 237 aa12.69□□□□□ -0.38
RAB40A-201ENST00000304236 NFAM1Q8NET5 270 aaPredicted RBP12.69□□□□□ -0.38
RAB40A-201ENST00000304236 OR4C16Q8NGL9 310 aa12.69□□□□□ -0.38
RAB40A-201ENST00000304236 OR6M1Q8NGM8 313 aa12.69□□□□□ -0.38
RAB40A-201ENST00000304236 FOXN4Q96NZ1 517 aa12.69□□□□□ -0.38
RAB40A-201ENST00000304236 POTEKPQ9BYX7 375 aa12.69□□□□□ -0.38
RAB40A-201ENST00000304236 SLC22A11Q9NSA0 550 aa12.69□□□□□ -0.38
RAB40A-201ENST00000304236 ARID1BQ8NFD5 2236 aaPredicted RBP12.69□□□□□ -0.38
RAB40A-201ENST00000304236 SPEGQ15772 3267 aa12.69□□□□□ -0.38
RAB40A-201ENST00000304236 TMEM272A0A1B0GTI8 110 aa12.69□□□□□ -0.38
RAB40A-201ENST00000304236 H3BSH0 61 aa12.69□□□□□ -0.38
RAB40A-201ENST00000304236 SRSF10O75494 262 aaKnown RBP12.69□□□□□ -0.38
RAB40A-201ENST00000304236 OR2A4O95047 310 aa12.69□□□□□ -0.38
RAB40A-201ENST00000304236 HRGP04196 525 aa12.69□□□□□ -0.38
RAB40A-201ENST00000304236 PNLIPP16233 465 aa12.69□□□□□ -0.38
RAB40A-201ENST00000304236 ANXA7P20073 488 aaKnown RBP12.69□□□□□ -0.38
RAB40A-201ENST00000304236 HTR2CP28335 458 aa12.69□□□□□ -0.38
RAB40A-201ENST00000304236 DNASE1L1P49184 302 aa12.69□□□□□ -0.38
RAB40A-201ENST00000304236 EFNB2P52799 333 aa12.69□□□□□ -0.38
RAB40A-201ENST00000304236 P2RX3P56373 397 aa12.69□□□□□ -0.38
RAB40A-201ENST00000304236 MFGE8Q08431 387 aaPredicted RBP12.69□□□□□ -0.38
RAB40A-201ENST00000304236 CLPPQ16740 277 aaPredicted RBP12.69□□□□□ -0.38
RAB40A-201ENST00000304236 TMEM244Q5VVB8 128 aa12.69□□□□□ -0.38
RAB40A-201ENST00000304236 FTMTQ8N4E7 242 aa12.69□□□□□ -0.38
RAB40A-201ENST00000304236 APCDD1LQ8NCL9 501 aa12.69□□□□□ -0.38
RAB40A-201ENST00000304236 SLC26A10Q8NG04 563 aa12.69□□□□□ -0.38
RAB40A-201ENST00000304236 OR5L2Q8NGL0 311 aa12.69□□□□□ -0.38
RAB40A-201ENST00000304236 OR1J4Q8NGS1 313 aa12.69□□□□□ -0.38
RAB40A-201ENST00000304236 OR6N1Q8NGY5 312 aa12.69□□□□□ -0.38
RAB40A-201ENST00000304236 SLC25A28Q96A46 364 aa12.69□□□□□ -0.38
RAB40A-201ENST00000304236 MARVELD3Q96A59 401 aa12.69□□□□□ -0.38
RAB40A-201ENST00000304236 OR2A7Q96R45 310 aa12.69□□□□□ -0.38
RAB40A-201ENST00000304236 NUDT22Q9BRQ3 303 aa12.69□□□□□ -0.38
RAB40A-201ENST00000304236 GINS4Q9BRT9 223 aa12.69□□□□□ -0.38
RAB40A-201ENST00000304236 DPCDQ9BVM2 203 aaPredicted RBP12.69□□□□□ -0.38
RAB40A-201ENST00000304236 TMPRSS13Q9BYE2 586 aa12.69□□□□□ -0.38
RAB40A-201ENST00000304236 ATG5Q9H1Y0 275 aa12.69□□□□□ -0.38
RAB40A-201ENST00000304236 SCPEP1Q9HB40 452 aa12.69□□□□□ -0.38
RAB40A-201ENST00000304236 CHST11Q9NPF2 352 aa12.69□□□□□ -0.38
RAB40A-201ENST00000304236 CACNA1CQ13936 2221 aa12.69□□□□□ -0.38
RAB40A-201ENST00000304236 EXPH5Q8NEV8 1989 aa12.68□□□□□ -0.38
RAB40A-201ENST00000304236 G3V3Q6 166 aa12.68□□□□□ -0.38
RAB40A-201ENST00000304236 RRP8O43159 456 aaKnown RBP12.68□□□□□ -0.38
RAB40A-201ENST00000304236 ALOX12BO75342 701 aa12.68□□□□□ -0.38
RAB40A-201ENST00000304236 GTF2F2P13984 249 aa12.68□□□□□ -0.38
RAB40A-201ENST00000304236 FBXW4P57775 412 aa12.68□□□□□ -0.38
RAB40A-201ENST00000304236 TSPAN5P62079 268 aa12.68□□□□□ -0.38
RAB40A-201ENST00000304236 SQSTM1Q13501 440 aa12.68□□□□□ -0.38
RAB40A-201ENST00000304236 OR7A5Q15622 319 aa12.68□□□□□ -0.38
RAB40A-201ENST00000304236 FAAP20Q6NZ36 180 aa12.68□□□□□ -0.38
RAB40A-201ENST00000304236 OR8H3Q8N146 312 aa12.68□□□□□ -0.38
RAB40A-201ENST00000304236 GPX8Q8TED1 209 aa12.68□□□□□ -0.38
RAB40A-201ENST00000304236 PTX4Q96A99 478 aa12.68□□□□□ -0.38
RAB40A-201ENST00000304236 FOXRED1Q96CU9 486 aaPredicted RBP12.68□□□□□ -0.38
RAB40A-201ENST00000304236 SLC25A44Q96H78 314 aaPredicted RBP12.68□□□□□ -0.38
RAB40A-201ENST00000304236 KCNK17Q96T54 332 aa12.68□□□□□ -0.38
RAB40A-201ENST00000304236 SLCO5A1Q9H2Y9 848 aa12.68□□□□□ -0.38
RAB40A-201ENST00000304236 FANCFQ9NPI8 374 aa12.68□□□□□ -0.38
RAB40A-201ENST00000304236 PIPOXQ9P0Z9 390 aa12.68□□□□□ -0.38
RAB40A-201ENST00000304236 UBQLN2Q9UHD9 624 aa12.68□□□□□ -0.38
RAB40A-201ENST00000304236 OR52A1Q9UKL2 312 aa12.68□□□□□ -0.38
RAB40A-201ENST00000304236 AUP1Q9Y679 476 aa12.68□□□□□ -0.38
RAB40A-201ENST00000304236 ASXL3Q9C0F0 2248 aa12.68□□□□□ -0.38
RAB40A-201ENST00000304236 IGHV3-20A0A0C4DH32 117 aa12.67□□□□□ -0.38
RAB40A-201ENST00000304236 OR2M5A3KFT3 312 aa12.67□□□□□ -0.38
RAB40A-201ENST00000304236 TUBAL3A6NHL2 446 aa12.67□□□□□ -0.38
RAB40A-201ENST00000304236 VSTM2BA6NLU5 285 aa12.67□□□□□ -0.38
RAB40A-201ENST00000304236 LEUTXA8MZ59 168 aa12.67□□□□□ -0.38
RAB40A-201ENST00000304236 PYCARD-AS1I3L0S3 204 aa12.67□□□□□ -0.38
RAB40A-201ENST00000304236 ETV2O00321 342 aaPredicted RBP12.67□□□□□ -0.38
RAB40A-201ENST00000304236 GP1BAP07359 652 aa12.67□□□□□ -0.38
RAB40A-201ENST00000304236 UBCP0CG48 685 aaKnown RBP12.67□□□□□ -0.38
RAB40A-201ENST00000304236 GABRA1P14867 456 aa12.67□□□□□ -0.38
RAB40A-201ENST00000304236 EIF2S3P41091 472 aaKnown RBP12.67□□□□□ -0.38
RAB40A-201ENST00000304236 GPR85P60893 370 aa12.67□□□□□ -0.38
RAB40A-201ENST00000304236 TLE3Q04726 772 aa12.67□□□□□ -0.38
RAB40A-201ENST00000304236 NKAIN1Q4KMZ8 207 aa12.67□□□□□ -0.38
RAB40A-201ENST00000304236 ASPHD2Q6ICH7 369 aa12.67□□□□□ -0.38
RAB40A-201ENST00000304236 SHISA6Q6ZSJ9 500 aa12.67□□□□□ -0.38
RAB40A-201ENST00000304236 SLC36A1Q7Z2H8 476 aa12.67□□□□□ -0.38
RAB40A-201ENST00000304236 CDH26Q8IXH8 852 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms