RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 MRPS2Q9Y399 296 aaKnown RBP14.84□□□□□ -0.03
BRD3-201ENST00000303407 VAMP5O95183 116 aa14.83□□□□□ -0.03
BRD3-201ENST00000303407 FOXF1Q12946 379 aa14.83□□□□□ -0.03
BRD3-201ENST00000303407 ZNF74Q16587 644 aa14.83□□□□□ -0.03
BRD3-201ENST00000303407 RBM38Q9H0Z9 239 aaKnown RBP14.83□□□□□ -0.03
BRD3-201ENST00000303407 SIRT3Q9NTG7 399 aaPredicted RBP14.83□□□□□ -0.03
BRD3-201ENST00000303407 IMPA2O14732 288 aa14.83□□□□□ -0.03
BRD3-201ENST00000303407 NKX2-2O95096 273 aa14.83□□□□□ -0.03
BRD3-201ENST00000303407 NXPH3O95157 252 aa14.83□□□□□ -0.03
BRD3-201ENST00000303407 EPXP11678 715 aa14.83□□□□□ -0.03
BRD3-201ENST00000303407 SLC16A12Q6ZSM3 486 aa14.83□□□□□ -0.03
BRD3-201ENST00000303407 SCARB1Q8WTV0 552 aa14.83□□□□□ -0.03
BRD3-201ENST00000303407 MBD1Q9UIS9 605 aaPredicted RBP14.83□□□□□ -0.03
BRD3-201ENST00000303407 B9D1Q9UPM9 204 aa14.83□□□□□ -0.03
BRD3-201ENST00000303407 ANKUB1A6NFN9 424 aa14.83□□□□□ -0.04
BRD3-201ENST00000303407 TNFSF11O14788 317 aa14.83□□□□□ -0.04
BRD3-201ENST00000303407 MPPED1O15442 326 aa14.83□□□□□ -0.04
BRD3-201ENST00000303407 NXPH2O95156 264 aa14.83□□□□□ -0.04
BRD3-201ENST00000303407 GNB3P16520 340 aa14.83□□□□□ -0.04
BRD3-201ENST00000303407 CATR1Q13166 79 aa14.83□□□□□ -0.04
BRD3-201ENST00000303407 ESCO2Q56NI9 601 aa14.83□□□□□ -0.04
BRD3-201ENST00000303407 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.83□□□□□ -0.04
BRD3-201ENST00000303407 RBPMSQ93062 196 aaKnown RBP14.83□□□□□ -0.04
BRD3-201ENST00000303407 GPR84Q9NQS5 396 aa14.83□□□□□ -0.04
BRD3-201ENST00000303407 CCL27Q9Y4X3 112 aa14.83□□□□□ -0.04
BRD3-201ENST00000303407 LMO7DNF2Z398 122 aa14.83□□□□□ -0.04
BRD3-201ENST00000303407 SHOXO15266 292 aa14.83□□□□□ -0.04
BRD3-201ENST00000303407 IFNA4P05014 189 aa14.83□□□□□ -0.04
BRD3-201ENST00000303407 GUSBP08236 651 aa14.83□□□□□ -0.04
BRD3-201ENST00000303407 CRYBB2P43320 205 aa14.83□□□□□ -0.04
BRD3-201ENST00000303407 RNLSQ5VYX0 342 aa14.83□□□□□ -0.04
BRD3-201ENST00000303407 GPR119Q8TDV5 335 aa14.83□□□□□ -0.04
BRD3-201ENST00000303407 RNF141Q8WVD5 230 aa14.83□□□□□ -0.04
BRD3-201ENST00000303407 SIGLEC11Q96RL6 698 aa14.83□□□□□ -0.04
BRD3-201ENST00000303407 SIGLEC7Q9Y286 467 aa14.83□□□□□ -0.04
BRD3-201ENST00000303407 TMEM235A6NFC5 223 aa14.83□□□□□ -0.04
BRD3-201ENST00000303407 KRBOX1C9JBD0 128 aa14.83□□□□□ -0.04
BRD3-201ENST00000303407 IGHA2P01877 340 aa14.83□□□□□ -0.04
BRD3-201ENST00000303407 M6PRP20645 277 aa14.83□□□□□ -0.04
BRD3-201ENST00000303407 GPR3P46089 330 aa14.83□□□□□ -0.04
BRD3-201ENST00000303407 RFX2P48378 723 aa14.83□□□□□ -0.04
BRD3-201ENST00000303407 CCL7P80098 99 aa14.83□□□□□ -0.04
BRD3-201ENST00000303407 FZD2Q14332 565 aa14.83□□□□□ -0.04
BRD3-201ENST00000303407 ZIC1Q15915 447 aa14.83□□□□□ -0.04
BRD3-201ENST00000303407 TMPRSS11FQ6ZWK6 438 aa14.83□□□□□ -0.04
BRD3-201ENST00000303407 DPPA2Q7Z7J5 298 aa14.83□□□□□ -0.04
BRD3-201ENST00000303407 KIF25Q9UIL4 384 aa14.83□□□□□ -0.04
BRD3-201ENST00000303407 A0A0U1RQK1 487 aa14.82□□□□□ -0.04
BRD3-201ENST00000303407 RAB4BP61018 213 aa14.82□□□□□ -0.04
BRD3-201ENST00000303407 OR51A2Q8NGJ7 313 aa14.82□□□□□ -0.04
BRD3-201ENST00000303407 OR2A5Q96R48 311 aa14.82□□□□□ -0.04
BRD3-201ENST00000303407 BIN3Q9NQY0 253 aa14.82□□□□□ -0.04
BRD3-201ENST00000303407 DNAJB12Q9NXW2 375 aaKnown RBP14.82□□□□□ -0.04
BRD3-201ENST00000303407 HOXC4P09017 264 aaPredicted RBP14.82□□□□□ -0.04
BRD3-201ENST00000303407 HMGA2P52926 109 aa14.82□□□□□ -0.04
BRD3-201ENST00000303407 TIGD3Q6B0B8 471 aa14.82□□□□□ -0.04
BRD3-201ENST00000303407 OR2G2Q8NGZ5 317 aa14.82□□□□□ -0.04
BRD3-201ENST00000303407 CTSFQ9UBX1 484 aa14.82□□□□□ -0.04
BRD3-201ENST00000303407 LALBAP00709 142 aa14.82□□□□□ -0.04
BRD3-201ENST00000303407 PCBP3P57721 371 aaKnown RBP14.82□□□□□ -0.04
BRD3-201ENST00000303407 DMBX1Q8NFW5 382 aa14.82□□□□□ -0.04
BRD3-201ENST00000303407 OR1N1Q8NGS0 311 aa14.82□□□□□ -0.04
BRD3-201ENST00000303407 DERL3Q96Q80 235 aa14.82□□□□□ -0.04
BRD3-201ENST00000303407 EXOGQ9Y2C4 368 aaKnown RBP14.82□□□□□ -0.04
BRD3-201ENST00000303407 FBXO7Q9Y3I1 522 aa14.82□□□□□ -0.04
BRD3-201ENST00000303407 TIMM10BQ9Y5J6 103 aa14.82□□□□□ -0.04
BRD3-201ENST00000303407 OTOL1A6NHN0 477 aaPredicted RBP14.82□□□□□ -0.04
BRD3-201ENST00000303407 NKX6-1P78426 367 aaPredicted RBP14.82□□□□□ -0.04
BRD3-201ENST00000303407 AADACL4Q5VUY2 407 aa14.82□□□□□ -0.04
BRD3-201ENST00000303407 RHOUQ7L0Q8 258 aa14.82□□□□□ -0.04
BRD3-201ENST00000303407 MRPL41Q8IXM3 137 aaKnown RBP14.82□□□□□ -0.04
BRD3-201ENST00000303407 SPEM1Q8N4L4 309 aa14.82□□□□□ -0.04
BRD3-201ENST00000303407 BHLHE23Q8NDY6 225 aa14.82□□□□□ -0.04
BRD3-201ENST00000303407 C22orf15Q8WYQ4 148 aa14.82□□□□□ -0.04
BRD3-201ENST00000303407 EMG1Q92979 244 aaKnown RBP14.82□□□□□ -0.04
BRD3-201ENST00000303407 SPACA5Q96QH8 159 aa14.82□□□□□ -0.04
BRD3-201ENST00000303407 SSX3Q99909 188 aa14.82□□□□□ -0.04
BRD3-201ENST00000303407 RBP2P50120 134 aa14.81□□□□□ -0.04
BRD3-201ENST00000303407 DOK1Q99704 481 aa14.81□□□□□ -0.04
BRD3-201ENST00000303407 BCO1Q9HAY6 547 aa14.81□□□□□ -0.04
BRD3-201ENST00000303407 B3GALT5Q9Y2C3 310 aa14.81□□□□□ -0.04
BRD3-201ENST00000303407 TTC3P53804 2025 aa14.81□□□□□ -0.04
BRD3-201ENST00000303407 TEX51A0A1B0GUA7 166 aa14.81□□□□□ -0.04
BRD3-201ENST00000303407 NME1P15531 152 aaKnown RBP14.81□□□□□ -0.04
BRD3-201ENST00000303407 TMEM92Q6UXU6 159 aa14.81□□□□□ -0.04
BRD3-201ENST00000303407 FAM213BQ8TBF2 198 aa14.81□□□□□ -0.04
BRD3-201ENST00000303407 TCTEX1D2Q8WW35 142 aa14.81□□□□□ -0.04
BRD3-201ENST00000303407 TAAR8Q969N4 342 aa14.81□□□□□ -0.04
BRD3-201ENST00000303407 ZG16BQ96DA0 208 aa14.81□□□□□ -0.04
BRD3-201ENST00000303407 PTDSS2Q9BVG9 487 aa14.81□□□□□ -0.04
BRD3-201ENST00000303407 MYOTQ9UBF9 498 aa14.81□□□□□ -0.04
BRD3-201ENST00000303407 A0A1W2PPV4 95 aa14.81□□□□□ -0.04
BRD3-201ENST00000303407 WISP3O95389 354 aaPredicted RBP14.81□□□□□ -0.04
BRD3-201ENST00000303407 SSX1Q16384 188 aa14.81□□□□□ -0.04
BRD3-201ENST00000303407 SLC22A25Q6T423 547 aa14.81□□□□□ -0.04
BRD3-201ENST00000303407 GPBAR1Q8TDU6 330 aa14.81□□□□□ -0.04
BRD3-201ENST00000303407 SHEQ5VZ18 495 aa14.81□□□□□ -0.04
BRD3-201ENST00000303407 ERVMER34-1Q9H9K5 563 aa14.81□□□□□ -0.04
BRD3-201ENST00000303407 PRSS23O95084 383 aa14.81□□□□□ -0.04
BRD3-201ENST00000303407 ALOX5APP20292 161 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms