RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 CD14P08571 375 aa9.52□□□□□ -0.89
CLIP1-201ENST00000302528 SEMA3BQ13214 749 aa9.52□□□□□ -0.89
CLIP1-201ENST00000302528 WDR88Q6ZMY6 472 aa9.52□□□□□ -0.89
CLIP1-201ENST00000302528 TMPRSS11FQ6ZWK6 438 aa9.52□□□□□ -0.89
CLIP1-201ENST00000302528 UBE3DQ7Z6J8 389 aa9.52□□□□□ -0.89
CLIP1-201ENST00000302528 TTC9BQ8N6N2 239 aa9.52□□□□□ -0.89
CLIP1-201ENST00000302528 OR4A4PQ8NGN8 299 aa9.52□□□□□ -0.89
CLIP1-201ENST00000302528 PHYHIPQ92561 330 aa9.52□□□□□ -0.89
CLIP1-201ENST00000302528 RASD2Q96D21 266 aa9.52□□□□□ -0.89
CLIP1-201ENST00000302528 TMEM208Q9BTX3 173 aa9.52□□□□□ -0.89
CLIP1-201ENST00000302528 HES4Q9HCC6 221 aa9.52□□□□□ -0.89
CLIP1-201ENST00000302528 KCNG2Q9UJ96 466 aa9.52□□□□□ -0.89
CLIP1-201ENST00000302528 DIMT1Q9UNQ2 313 aaKnown RBP9.52□□□□□ -0.89
CLIP1-201ENST00000302528 COA3Q9Y2R0 106 aaPredicted RBP9.52□□□□□ -0.89
CLIP1-201ENST00000302528 MYO10Q9HD67 2058 aa9.52□□□□□ -0.89
CLIP1-201ENST00000302528 ZNF716A6NP11 495 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 CSO75390 466 aaKnown RBP9.51□□□□□ -0.89
CLIP1-201ENST00000302528 PMCHP20382 165 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 FCGR2CP31995 323 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 CELF2-AS1Q8N7Q2 184 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 IFI44Q8TCB0 444 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 SLC38A5Q8WUX1 472 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 TMEM255BQ8WV15 326 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 CIB3Q96Q77 187 aaPredicted RBP9.51□□□□□ -0.89
CLIP1-201ENST00000302528 VAMP8Q9BV40 100 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 AAMDCQ9H7C9 122 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 RNF186Q9NXI6 227 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 KAT6AQ92794 2004 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 TIAM2Q8IVF5 1701 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 CALCBP10092 127 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 FPR3P25089 353 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 RAB1AP62820 205 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 PAX5Q02548 391 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 C1orf140Q5VVS0 124 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 CD276Q5ZPR3 534 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 H1FNTQ75WM6 255 aaPredicted RBP9.51□□□□□ -0.89
CLIP1-201ENST00000302528 RXFP4Q8TDU9 374 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 KCNE4Q8WWG9 221 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 PECRQ9BY49 303 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 FGF21Q9NSA1 209 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 SLC17A4Q9Y2C5 497 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 LRP6O75581 1613 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 M0R1B8 84 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 AKR7A3O95154 331 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 IL2RAP01589 272 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 ADRB1P08588 477 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 RRASP10301 218 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 CEBPEQ15744 281 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 EXT1Q16394 746 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 SLC35D3Q5M8T2 416 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 RPUSD3Q6P087 351 aaKnown RBP9.51□□□□□ -0.89
CLIP1-201ENST00000302528 PLXDC2Q6UX71 529 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 RDH5Q92781 318 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 BCL2L2Q92843 193 aaPredicted RBP9.51□□□□□ -0.89
CLIP1-201ENST00000302528 TRMT61AQ96FX7 289 aaKnown RBP9.51□□□□□ -0.89
CLIP1-201ENST00000302528 TMEM231Q9H6L2 316 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 PARD6AQ9NPB6 346 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 HRH3Q9Y5N1 445 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 MYH15Q9Y2K3 1946 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 ZNF354AO60765 605 aaPredicted RBP9.51□□□□□ -0.89
CLIP1-201ENST00000302528 CRYAAP02489 173 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 AOAHP28039 575 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 ZNF140P52738 457 aaPredicted RBP9.51□□□□□ -0.89
CLIP1-201ENST00000302528 NKAIN2Q5VXU1 208 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 DYNC2LI1Q8TCX1 351 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 ZPBPQ9BS86 351 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 WDR61Q9GZS3 305 aaKnown RBP9.51□□□□□ -0.89
CLIP1-201ENST00000302528 NAA50Q9GZZ1 169 aaKnown RBP9.51□□□□□ -0.89
CLIP1-201ENST00000302528 PRSS16Q9NQE7 514 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 PSENENQ9NZ42 101 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 C5orf52A6NGY3 159 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 NPY1RP25929 384 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 YPEL5P62699 121 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 PMP22Q01453 160 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 TMEM268Q5VZI3 342 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 DGAT2L7PQ6IED9 249 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 PRSS45Q7RTY3 260 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 RETREG3Q86VR2 466 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 COMMD1Q8N668 190 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 TMED6Q8WW62 240 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 NDRG3Q9UGV2 375 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 PSORS1C1Q9UIG5 152 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 RNF24Q9Y225 148 aa9.51□□□□□ -0.89
CLIP1-201ENST00000302528 PHOX2AO14813 284 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 CYBAP13498 195 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 FABP4P15090 132 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 ACHEP22303 614 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 IRS1P35568 1242 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 SRP9P49458 86 aaKnown RBP9.5□□□□□ -0.89
CLIP1-201ENST00000302528 ERVFC1-1P60608 527 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 TEKQ02763 1124 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 TMEM81Q6P7N7 255 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 SLC38A6Q8IZM9 456 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 SLC38A9Q8NBW4 561 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 OR5M1Q8NGP8 315 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 FGF13Q92913 245 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 PROCRQ9UNN8 238 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 MMACHCQ9Y4U1 282 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 OR2F2O95006 317 aa9.5□□□□□ -0.89
CLIP1-201ENST00000302528 DAPP51397 102 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms