RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 SLC22A13Q9Y226 551 aa13.87□□□□□ -0.19
HERPUD1-201ENST00000300302 ZFHX4Q86UP3 3567 aa13.86□□□□□ -0.19
HERPUD1-201ENST00000300302 A0A087WV48 116 aa13.86□□□□□ -0.19
HERPUD1-201ENST00000300302 RER1O15258 196 aa13.86□□□□□ -0.19
HERPUD1-201ENST00000300302 YES1P07947 543 aa13.86□□□□□ -0.19
HERPUD1-201ENST00000300302 GRB2P62993 217 aaKnown RBP13.86□□□□□ -0.19
HERPUD1-201ENST00000300302 BCL2L15Q5TBC7 163 aa13.86□□□□□ -0.19
HERPUD1-201ENST00000300302 NR2C2APQ86WQ0 139 aa13.86□□□□□ -0.19
HERPUD1-201ENST00000300302 LAX1Q8IWV1 398 aa13.86□□□□□ -0.19
HERPUD1-201ENST00000300302 TUSC5Q8IXB3 177 aa13.86□□□□□ -0.19
HERPUD1-201ENST00000300302 RDH10Q8IZV5 341 aa13.86□□□□□ -0.19
HERPUD1-201ENST00000300302 PARP16Q8N5Y8 322 aa13.86□□□□□ -0.19
HERPUD1-201ENST00000300302 ALKBH3Q96Q83 286 aaPredicted RBP13.86□□□□□ -0.19
HERPUD1-201ENST00000300302 LINC00470Q9BZP3 86 aa13.86□□□□□ -0.19
HERPUD1-201ENST00000300302 SLCO5A1Q9H2Y9 848 aa13.86□□□□□ -0.19
HERPUD1-201ENST00000300302 MOB1AQ9H8S9 216 aa13.86□□□□□ -0.19
HERPUD1-201ENST00000300302 COMMD3Q9UBI1 195 aa13.86□□□□□ -0.19
HERPUD1-201ENST00000300302 NOTOA8MTQ0 251 aa13.85□□□□□ -0.19
HERPUD1-201ENST00000300302 PIN1P1O15428 100 aa13.85□□□□□ -0.19
HERPUD1-201ENST00000300302 ISG15P05161 165 aa13.85□□□□□ -0.19
HERPUD1-201ENST00000300302 UBCP0CG48 685 aaKnown RBP13.85□□□□□ -0.19
HERPUD1-201ENST00000300302 FCGR2AP12318 317 aa13.85□□□□□ -0.19
HERPUD1-201ENST00000300302 SOX2P48431 317 aa13.85□□□□□ -0.19
HERPUD1-201ENST00000300302 ENDOGQ14249 297 aaKnown RBP13.85□□□□□ -0.19
HERPUD1-201ENST00000300302 BTLAQ7Z6A9 289 aa13.85□□□□□ -0.19
HERPUD1-201ENST00000300302 SPACA3Q8IXA5 215 aa13.85□□□□□ -0.19
HERPUD1-201ENST00000300302 LRRC18Q8N456 261 aa13.85□□□□□ -0.19
HERPUD1-201ENST00000300302 TMEM106AQ96A25 262 aa13.85□□□□□ -0.19
HERPUD1-201ENST00000300302 GPR35Q9HC97 309 aa13.85□□□□□ -0.19
HERPUD1-201ENST00000300302 G6PC2Q9NQR9 355 aa13.85□□□□□ -0.19
HERPUD1-201ENST00000300302 TMEM38BQ9NVV0 291 aa13.85□□□□□ -0.19
HERPUD1-201ENST00000300302 FAM206AQ9NX38 181 aa13.85□□□□□ -0.19
HERPUD1-201ENST00000300302 ADAM30Q9UKF2 790 aa13.85□□□□□ -0.19
HERPUD1-201ENST00000300302 ZNF175Q9Y473 711 aa13.85□□□□□ -0.19
HERPUD1-201ENST00000300302 A0A1B0GVC2 190 aa13.84□□□□□ -0.19
HERPUD1-201ENST00000300302 SLC22A20A6NK97 555 aa13.84□□□□□ -0.19
HERPUD1-201ENST00000300302 MKRN2OSH3BPM6 223 aa13.84□□□□□ -0.19
HERPUD1-201ENST00000300302 AQP7O14520 342 aa13.84□□□□□ -0.19
HERPUD1-201ENST00000300302 CD2P06729 351 aa13.84□□□□□ -0.19
HERPUD1-201ENST00000300302 OR10A3P58181 314 aa13.84□□□□□ -0.19
HERPUD1-201ENST00000300302 PSMA6P60900 246 aaKnown RBP13.84□□□□□ -0.19
HERPUD1-201ENST00000300302 CEACAM16Q2WEN9 425 aa13.84□□□□□ -0.19
HERPUD1-201ENST00000300302 TMEM244Q5VVB8 128 aa13.84□□□□□ -0.19
HERPUD1-201ENST00000300302 ZNF837Q96EG3 531 aaPredicted RBP13.84□□□□□ -0.19
HERPUD1-201ENST00000300302 CALHM2Q9HA72 323 aa13.84□□□□□ -0.19
HERPUD1-201ENST00000300302 GP6Q9HCN6 339 aa13.84□□□□□ -0.19
HERPUD1-201ENST00000300302 PNRC2Q9NPJ4 139 aaKnown RBP13.84□□□□□ -0.19
HERPUD1-201ENST00000300302 DAPK2Q9UIK4 370 aa13.84□□□□□ -0.19
HERPUD1-201ENST00000300302 HHLA2Q9UM44 414 aa13.84□□□□□ -0.19
HERPUD1-201ENST00000300302 DHDHQ9UQ10 334 aa13.84□□□□□ -0.19
HERPUD1-201ENST00000300302 CACNA1CQ13936 2221 aa13.84□□□□□ -0.19
HERPUD1-201ENST00000300302 TRBV5-7A0A0A0MS05 114 aa13.84□□□□□ -0.19
HERPUD1-201ENST00000300302 A0A0G2JK05 382 aa13.84□□□□□ -0.19
HERPUD1-201ENST00000300302 RRP8O43159 456 aaKnown RBP13.84□□□□□ -0.19
HERPUD1-201ENST00000300302 TMEM127O75204 238 aa13.84□□□□□ -0.19
HERPUD1-201ENST00000300302 CST2P09228 141 aa13.84□□□□□ -0.19
HERPUD1-201ENST00000300302 ACHEP22303 614 aa13.84□□□□□ -0.19
HERPUD1-201ENST00000300302 PLA2G5P39877 138 aa13.84□□□□□ -0.19
HERPUD1-201ENST00000300302 EIF2S3P41091 472 aaKnown RBP13.84□□□□□ -0.19
HERPUD1-201ENST00000300302 MAGEB1P43366 347 aa13.84□□□□□ -0.19
HERPUD1-201ENST00000300302 STK11Q15831 433 aa13.84□□□□□ -0.19
HERPUD1-201ENST00000300302 Q6ZS92 163 aa13.84□□□□□ -0.19
HERPUD1-201ENST00000300302 OR51A4Q8NGJ6 313 aa13.84□□□□□ -0.19
HERPUD1-201ENST00000300302 OR10AC1Q8NH08 325 aa13.84□□□□□ -0.19
HERPUD1-201ENST00000300302 SARAFQ96BY9 339 aa13.84□□□□□ -0.19
HERPUD1-201ENST00000300302 DIRAS2Q96HU8 199 aa13.84□□□□□ -0.19
HERPUD1-201ENST00000300302 FOXB1Q99853 325 aa13.84□□□□□ -0.19
HERPUD1-201ENST00000300302 PRDM14Q9GZV8 571 aa13.84□□□□□ -0.19
HERPUD1-201ENST00000300302 ZCCHC4Q9H5U6 513 aa13.84□□□□□ -0.19
HERPUD1-201ENST00000300302 DDX28Q9NUL7 540 aaKnown RBP13.84□□□□□ -0.19
HERPUD1-201ENST00000300302 ZNF407Q9C0G0 2248 aa13.83□□□□□ -0.2
HERPUD1-201ENST00000300302 SLC19A2O60779 497 aa13.83□□□□□ -0.2
HERPUD1-201ENST00000300302 ADRB1P08588 477 aa13.83□□□□□ -0.2
HERPUD1-201ENST00000300302 EPXP11678 715 aa13.83□□□□□ -0.2
HERPUD1-201ENST00000300302 PSMD7P51665 324 aa13.83□□□□□ -0.2
HERPUD1-201ENST00000300302 HIST1H3AP68431 136 aa13.83□□□□□ -0.2
HERPUD1-201ENST00000300302 NRN1LQ496H8 165 aa13.83□□□□□ -0.2
HERPUD1-201ENST00000300302 CEP78Q5JTW2 689 aa13.83□□□□□ -0.2
HERPUD1-201ENST00000300302 HIST2H3PS2Q5TEC6 136 aa13.83□□□□□ -0.2
HERPUD1-201ENST00000300302 TSPO2Q5TGU0 170 aa13.83□□□□□ -0.2
HERPUD1-201ENST00000300302 PLXDC2Q6UX71 529 aa13.83□□□□□ -0.2
HERPUD1-201ENST00000300302 HIST2H3AQ71DI3 136 aa13.83□□□□□ -0.2
HERPUD1-201ENST00000300302 ELMOD2Q8IZ81 293 aa13.83□□□□□ -0.2
HERPUD1-201ENST00000300302 PPP1R14AQ96A00 147 aa13.83□□□□□ -0.2
HERPUD1-201ENST00000300302 APH1AQ96BI3 265 aa13.83□□□□□ -0.2
HERPUD1-201ENST00000300302 PBOV1Q9GZY1 135 aa13.83□□□□□ -0.2
HERPUD1-201ENST00000300302 SLC25A18Q9H1K4 315 aa13.83□□□□□ -0.2
HERPUD1-201ENST00000300302 MIXL1Q9H2W2 232 aa13.83□□□□□ -0.2
HERPUD1-201ENST00000300302 BRD7Q9NPI1 651 aa13.83□□□□□ -0.2
HERPUD1-201ENST00000300302 AK6Q9Y3D8 172 aaKnown RBP13.83□□□□□ -0.2
HERPUD1-201ENST00000300302 PHF3Q92576 2039 aaKnown RBP13.83□□□□□ -0.2
HERPUD1-201ENST00000300302 CFAP47Q6ZTR5 3102 aa13.83□□□□□ -0.2
HERPUD1-201ENST00000300302 FARS2O95363 451 aaKnown RBP13.82□□□□□ -0.2
HERPUD1-201ENST00000300302 B4GALT1P15291 398 aa13.82□□□□□ -0.2
HERPUD1-201ENST00000300302 CTSSP25774 331 aa13.82□□□□□ -0.2
HERPUD1-201ENST00000300302 ELFN2Q5R3F8 820 aa13.82□□□□□ -0.2
HERPUD1-201ENST00000300302 STAC2Q6ZMT1 411 aa13.82□□□□□ -0.2
HERPUD1-201ENST00000300302 LINGO2Q7L985 606 aa13.82□□□□□ -0.2
HERPUD1-201ENST00000300302 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.82□□□□□ -0.2
HERPUD1-201ENST00000300302 SYT9Q86SS6 491 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms