RNA–Protein interactions for RNA: ENST00000296799.8

ARHGEF28-202, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ARHGEF28, Length 4,424 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-202ENST00000296799 ZNF705EA8MWA4 302 aaPredicted RBP13.68□□□□□ -0.22
ARHGEF28-202ENST00000296799 D6RAR5 112 aa13.68□□□□□ -0.22
ARHGEF28-202ENST00000296799 M0QYG6 137 aa13.68□□□□□ -0.22
ARHGEF28-202ENST00000296799 APOC3P02656 99 aa13.68□□□□□ -0.22
ARHGEF28-202ENST00000296799 PLGLAQ15195 96 aa13.68□□□□□ -0.22
ARHGEF28-202ENST00000296799 TRIP6Q15654 476 aaKnown RBP13.68□□□□□ -0.22
ARHGEF28-202ENST00000296799 ZNF610Q8N9Z0 462 aa13.68□□□□□ -0.22
ARHGEF28-202ENST00000296799 DYNC2LI1Q8TCX1 351 aa13.68□□□□□ -0.22
ARHGEF28-202ENST00000296799 C11orf40Q8WZ69 217 aa13.68□□□□□ -0.22
ARHGEF28-202ENST00000296799 OCEL1Q9H607 264 aa13.68□□□□□ -0.22
ARHGEF28-202ENST00000296799 FIGNL2A6NMB9 653 aa13.68□□□□□ -0.22
ARHGEF28-202ENST00000296799 SULT1B1O43704 296 aa13.68□□□□□ -0.22
ARHGEF28-202ENST00000296799 B4GALT1P15291 398 aa13.68□□□□□ -0.22
ARHGEF28-202ENST00000296799 CAMLGP49069 296 aa13.68□□□□□ -0.22
ARHGEF28-202ENST00000296799 FOXC1Q12948 553 aa13.68□□□□□ -0.22
ARHGEF28-202ENST00000296799 OR1C1Q15619 314 aa13.68□□□□□ -0.22
ARHGEF28-202ENST00000296799 FAM27D1Q5T7N8 215 aa13.68□□□□□ -0.22
ARHGEF28-202ENST00000296799 ZNF767PQ75MW2 155 aa13.68□□□□□ -0.22
ARHGEF28-202ENST00000296799 BATF2Q8N1L9 274 aa13.68□□□□□ -0.22
ARHGEF28-202ENST00000296799 D2HGDHQ8N465 521 aa13.68□□□□□ -0.22
ARHGEF28-202ENST00000296799 TAAR8Q969N4 342 aa13.68□□□□□ -0.22
ARHGEF28-202ENST00000296799 ZNF486Q96H40 463 aaPredicted RBP13.68□□□□□ -0.22
ARHGEF28-202ENST00000296799 TP53TG5Q9Y2B4 290 aa13.68□□□□□ -0.22
ARHGEF28-202ENST00000296799 ARPC3O15145 178 aa13.67□□□□□ -0.22
ARHGEF28-202ENST00000296799 HYAL3O43820 417 aaPredicted RBP13.67□□□□□ -0.22
ARHGEF28-202ENST00000296799 ELK1P19419 428 aa13.67□□□□□ -0.22
ARHGEF28-202ENST00000296799 RAP2BP61225 183 aa13.67□□□□□ -0.22
ARHGEF28-202ENST00000296799 PSG6Q00889 435 aa13.67□□□□□ -0.22
ARHGEF28-202ENST00000296799 SHBQ15464 509 aa13.67□□□□□ -0.22
ARHGEF28-202ENST00000296799 WDR74Q6RFH5 385 aaPredicted RBP13.67□□□□□ -0.22
ARHGEF28-202ENST00000296799 OR5AS1Q8N127 324 aa13.67□□□□□ -0.22
ARHGEF28-202ENST00000296799 OR1M1Q8NGA1 313 aa13.67□□□□□ -0.22
ARHGEF28-202ENST00000296799 OR52H1Q8NGJ2 320 aa13.67□□□□□ -0.22
ARHGEF28-202ENST00000296799 OCIAD1Q9NX40 245 aa13.67□□□□□ -0.22
ARHGEF28-202ENST00000296799 NBASA2RRP1 2371 aa13.67□□□□□ -0.22
ARHGEF28-202ENST00000296799 CCR6P51684 374 aa13.67□□□□□ -0.22
ARHGEF28-202ENST00000296799 CCR9P51686 369 aa13.67□□□□□ -0.22
ARHGEF28-202ENST00000296799 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.67□□□□□ -0.22
ARHGEF28-202ENST00000296799 COL13A1Q5TAT6 717 aaPredicted RBP13.67□□□□□ -0.22
ARHGEF28-202ENST00000296799 FBXW12Q6X9E4 464 aa13.67□□□□□ -0.22
ARHGEF28-202ENST00000296799 DND1Q8IYX4 353 aaKnown RBP13.67□□□□□ -0.22
ARHGEF28-202ENST00000296799 CELF2-AS1Q8N7Q2 184 aa13.67□□□□□ -0.22
ARHGEF28-202ENST00000296799 RNF128Q8TEB7 428 aa13.67□□□□□ -0.22
ARHGEF28-202ENST00000296799 ANKRD9Q96BM1 317 aaPredicted RBP13.67□□□□□ -0.22
ARHGEF28-202ENST00000296799 TSNAXQ99598 290 aaKnown RBP13.67□□□□□ -0.22
ARHGEF28-202ENST00000296799 RANGRFQ9HD47 186 aaPredicted RBP13.67□□□□□ -0.22
ARHGEF28-202ENST00000296799 SLCO1C1Q9NYB5 712 aa13.67□□□□□ -0.22
ARHGEF28-202ENST00000296799 CACNA1HO95180 2353 aa13.67□□□□□ -0.22
ARHGEF28-202ENST00000296799 E9PI62 339 aa13.67□□□□□ -0.22
ARHGEF28-202ENST00000296799 IFNA2P01563 188 aa13.67□□□□□ -0.22
ARHGEF28-202ENST00000296799 CEACAM16Q2WEN9 425 aa13.67□□□□□ -0.22
ARHGEF28-202ENST00000296799 ZNF546Q86UE3 836 aa13.67□□□□□ -0.22
ARHGEF28-202ENST00000296799 C10orf111Q8N326 155 aa13.67□□□□□ -0.22
ARHGEF28-202ENST00000296799 RAB39BQ96DA2 213 aa13.67□□□□□ -0.22
ARHGEF28-202ENST00000296799 OCSTAMPQ9BR26 566 aa13.67□□□□□ -0.22
ARHGEF28-202ENST00000296799 LHX9Q9NQ69 397 aa13.67□□□□□ -0.22
ARHGEF28-202ENST00000296799 GDF2Q9UK05 429 aaPredicted RBP13.67□□□□□ -0.22
ARHGEF28-202ENST00000296799 HES3Q5TGS1 186 aa13.67□□□□□ -0.22
ARHGEF28-202ENST00000296799 ORAI1Q96D31 301 aa13.67□□□□□ -0.22
ARHGEF28-202ENST00000296799 SEC22AQ96IW7 307 aa13.67□□□□□ -0.22
ARHGEF28-202ENST00000296799 B3GAT1Q9P2W7 334 aa13.67□□□□□ -0.22
ARHGEF28-202ENST00000296799 C5orf49A4QMS7 147 aa13.66□□□□□ -0.22
ARHGEF28-202ENST00000296799 CYR61O00622 381 aa13.66□□□□□ -0.22
ARHGEF28-202ENST00000296799 MPPED1O15442 326 aa13.66□□□□□ -0.22
ARHGEF28-202ENST00000296799 CDK5Q00535 292 aa13.66□□□□□ -0.22
ARHGEF28-202ENST00000296799 OR10K1Q8NGX5 313 aa13.66□□□□□ -0.22
ARHGEF28-202ENST00000296799 FAM173AQ9BQD7 235 aa13.66□□□□□ -0.22
ARHGEF28-202ENST00000296799 SPTAN1Q13813 2472 aaKnown RBP13.66□□□□□ -0.22
ARHGEF28-202ENST00000296799 IGHV3-64DA0A0J9YX35 117 aa13.66□□□□□ -0.22
ARHGEF28-202ENST00000296799 MSL3P1P0C860 447 aa13.66□□□□□ -0.22
ARHGEF28-202ENST00000296799 CALCBP10092 127 aa13.66□□□□□ -0.22
ARHGEF28-202ENST00000296799 DOC2BQ14184 412 aa13.66□□□□□ -0.22
ARHGEF28-202ENST00000296799 SSPNQ14714 243 aa13.66□□□□□ -0.22
ARHGEF28-202ENST00000296799 PCK2Q16822 640 aa13.66□□□□□ -0.22
ARHGEF28-202ENST00000296799 TRAV17A0A0B4J275 112 aa13.66□□□□□ -0.22
ARHGEF28-202ENST00000296799 PMS2P1A4D2B8 440 aa13.66□□□□□ -0.22
ARHGEF28-202ENST00000296799 OR10A3P58181 314 aa13.66□□□□□ -0.22
ARHGEF28-202ENST00000296799 AKR1C8PQ5T2L2 129 aa13.66□□□□□ -0.22
ARHGEF28-202ENST00000296799 COMTD1Q86VU5 262 aa13.66□□□□□ -0.22
ARHGEF28-202ENST00000296799 OR2Y1Q8NGV0 311 aa13.66□□□□□ -0.22
ARHGEF28-202ENST00000296799 CPNE4Q96A23 557 aaPredicted RBP13.66□□□□□ -0.22
ARHGEF28-202ENST00000296799 VSTM2LQ96N03 204 aa13.66□□□□□ -0.22
ARHGEF28-202ENST00000296799 ZCCHC4Q9H5U6 513 aa13.66□□□□□ -0.22
ARHGEF28-202ENST00000296799 R4GMQ9 66 aa13.66□□□□□ -0.22
ARHGEF28-202ENST00000296799 SLC22A20A6NK97 555 aa13.65□□□□□ -0.22
ARHGEF28-202ENST00000296799 IFITM5A6NNB3 132 aa13.65□□□□□ -0.22
ARHGEF28-202ENST00000296799 AIPO00170 330 aa13.65□□□□□ -0.22
ARHGEF28-202ENST00000296799 PEBP1P30086 187 aaKnown RBP13.65□□□□□ -0.22
ARHGEF28-202ENST00000296799 ZNF141Q15928 474 aa13.65□□□□□ -0.22
ARHGEF28-202ENST00000296799 THSD4Q6ZMP0 1018 aa13.65□□□□□ -0.22
ARHGEF28-202ENST00000296799 SLC7A5P1Q8MH63 180 aa13.65□□□□□ -0.22
ARHGEF28-202ENST00000296799 INTS12Q96CB8 462 aaKnown RBP13.65□□□□□ -0.22
ARHGEF28-202ENST00000296799 BCO1Q9HAY6 547 aa13.65□□□□□ -0.22
ARHGEF28-202ENST00000296799 GLTPQ9NZD2 209 aa13.65□□□□□ -0.22
ARHGEF28-202ENST00000296799 SDK2Q58EX2 2172 aa13.65□□□□□ -0.22
ARHGEF28-202ENST00000296799 PIKFYVEQ9Y2I7 2098 aa13.65□□□□□ -0.22
ARHGEF28-202ENST00000296799 CCDC163A0A0D9SF12 145 aa13.65□□□□□ -0.22
ARHGEF28-202ENST00000296799 SERPINA7P05543 415 aa13.65□□□□□ -0.22
ARHGEF28-202ENST00000296799 EDDM3BP56851 147 aa13.65□□□□□ -0.22
ARHGEF28-202ENST00000296799 FOXB2Q5VYV0 432 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms