RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 FAM26DQ5JW98 314 aa10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 LINC00346Q8IVM7 164 aa10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 PRSS35Q8N3Z0 413 aa10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 ZNF2Q9BSG1 426 aaPredicted RBP10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 PARP4Q9UKK3 1724 aaKnown RBP10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 CD68P34810 354 aaPredicted RBP10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 APLNRP35414 380 aa10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 INCA1Q0VD86 236 aa10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 PIGLQ9Y2B2 252 aa10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 SNHG28P0DPA3 235 aa10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 FAM78BQ5VT40 261 aa10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 LIPNQ5VXI9 398 aa10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 FBXL6Q8N531 539 aa10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 CCNL2Q96S94 520 aaPredicted RBP10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 SUSD2Q9UGT4 822 aa10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 EVX1P49640 407 aa10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 CTF1Q16619 201 aa10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 WBP2NLQ6ICG8 309 aa10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 ZNF583Q96ND8 569 aa10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 MRPL2Q5T653 305 aaKnown RBP10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 FAM69BQ5VUD6 431 aa10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 ADPRHL1Q8NDY3 354 aa10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 FLVCR1Q9Y5Y0 555 aa10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 OR7C2O60412 319 aa10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 AIFM1O95831 613 aa10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 SLC25A4P12235 298 aa10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 FOXK2Q01167 660 aa10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 RGP1Q92546 391 aaPredicted RBP10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 ST6GAL2Q96JF0 529 aa10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 ZFYVE21Q9BQ24 234 aa10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 SPATA31D1Q6ZQQ2 1576 aa10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 A0A1W2PRU2 124 aa10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 TMEM129A0AVI4 362 aa10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 OR5H8P0DN80 308 aa10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 UQCRFS1P47985 274 aa10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 ERVS71-1P61550 626 aa10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 SOX4Q06945 474 aaPredicted RBP10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 OR2AE1Q8NHA4 323 aa10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 MTCL1Q9Y4B5 1905 aaKnown RBP10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 HMX2A2RU54 273 aa10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 DEDDO75618 318 aa10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 CD200P41217 278 aa10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 RPEL1Q2QD12 228 aa10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 SLC35A3Q9Y2D2 325 aa10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 ECI1P42126 302 aa10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 GRINAQ7Z429 371 aa10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 TGIF2LXQ8IUE1 241 aa10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 DEFB119Q8N690 84 aa10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 TEX37Q96LM6 180 aa10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 C2orf50Q96LR7 162 aa10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 SERINC2Q96SA4 455 aa10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 NWD2Q9ULI1 1742 aa10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 CD1CP29017 333 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 ERVFRD-1P60508 538 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 UBE2NP61088 152 aaKnown RBP10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 CATR1Q13166 79 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 CTSL3PQ5NE16 218 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 LINC00469Q8N7U9 141 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 M1APQ8TC57 530 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 RTP4Q96DX8 246 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 TIMP2P16035 220 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 CXCL9Q07325 125 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 DHRS7BQ6IAN0 325 aaPredicted RBP10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 H2BFWTQ7Z2G1 175 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 LMO3Q8TAP4 145 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 RHBDL1O75783 438 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 GYPAP02724 150 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 CSNK1A1P48729 337 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 CMTM8Q8IZV2 173 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 SLCO1B1Q9Y6L6 691 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 SEMG1P04279 462 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 CR2P20023 1033 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 ABCD3P28288 659 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 BCL6P41182 706 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 PJVKQ0ZLH3 352 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 WDR5BQ86VZ2 330 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 ETFBKMTQ8IXQ9 262 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 ZC3H3Q8IXZ2 948 aaKnown RBP10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 RTN4IP1Q8WWV3 396 aaPredicted RBP10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 PIGTQ969N2 578 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 BMFQ96LC9 184 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 ZNF92Q03936 586 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 C19orf57Q0VDD7 668 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 LKAAEAR1Q8TD35 194 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 MVB12BQ9H7P6 319 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 GNB4Q9HAV0 340 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 POLMQ9NP87 494 aaPredicted RBP10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 PLEK2Q9NYT0 353 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 LHX3Q9UBR4 397 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 VDAC3Q9Y277 283 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 ARPC3O15145 178 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 HMGN2P05204 90 aaKnown RBP10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 CTSLP07711 333 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 DGAT2L6Q6ZPD8 337 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 SIRT6Q8N6T7 355 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 DIO2Q92813 273 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 PRR14Q9BWN1 585 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 FBXO4Q9UKT5 387 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 TNFRSF10CO14798 259 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 IGF2P01344 180 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms