RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 OPALINQ96PE5 141 aa10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 INSM2Q96T92 566 aaPredicted RBP10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 NDRG3Q9UGV2 375 aa10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 H0YGG7 62 aa10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 HPNP05981 417 aa10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 TPOP07202 933 aa10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 RNF4P78317 190 aa10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 P2RY12Q9H244 342 aa10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 EMC9Q9Y3B6 208 aa10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 A0A087WUU8 490 aa10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 H7C1C5 153 aa10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 BET1O15155 118 aa10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 ST8SIA3O43173 380 aa10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 PSMB3P49720 205 aa10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 EPHA4P54764 986 aa10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 LCN6P62502 163 aa10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 RAB1AP62820 205 aa10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 TGFBR3Q03167 851 aa10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 SYT9Q86SS6 491 aa10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 ANKRD53Q8N9V6 530 aa10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 SEH1LQ96EE3 360 aa10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 NKX3-1Q99801 234 aaPredicted RBP10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 PDCD1LG2Q9BQ51 273 aa10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 SLC25A37Q9NYZ2 338 aa10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 DNAJB11Q9UBS4 358 aa10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 ZNF318Q5VUA4 2279 aa10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 PPP5D1E7EU14 171 aa10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 MT-CO3P00414 261 aa10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 CD59P13987 128 aa10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 ZNF133P52736 654 aaPredicted RBP10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 MFAP5Q13361 173 aa10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 STK11Q15831 433 aa10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 ADIRFQ15847 76 aa10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 ZNF684Q5T5D7 378 aa10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 ZBTB37Q5TC79 503 aa10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 ZNF425Q6IV72 752 aa10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 SYS1Q8N2H4 156 aa10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 SECTM1Q8WVN6 248 aa10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 SPNS1Q9H2V7 528 aa10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 ZCCHC4Q9H5U6 513 aa10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 MCTS1Q9ULC4 181 aaKnown RBP10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 GAB2Q9UQC2 676 aa10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 TRAPPC4Q9Y296 219 aa10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 B3GALT5Q9Y2C3 310 aa10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 B3GALNT1O75752 331 aa10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 HLA-DOBP13765 273 aa10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 PNLIPP16233 465 aa10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 GCH1P30793 250 aa10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 CTF1Q16619 201 aa10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 SHEQ5VZ18 495 aa10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 SIGIRRQ6IA17 410 aa10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 NPSR1Q6W5P4 371 aa10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 C15orf54Q8N8G6 183 aa10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 OR9K2Q8NGE7 335 aa10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 OR51A4Q8NGJ6 313 aa10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 OR13C8Q8NGS7 320 aa10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 LINC00615Q96LM1 132 aaPredicted RBP10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 C12orf57Q99622 126 aa10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 TXN2Q99757 166 aa10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 ENKD1Q9H0I2 346 aa10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 CMC2Q9NRP2 79 aa10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 MYOTQ9UBF9 498 aa10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 MPPED1O15442 326 aa10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 SUSD5O60279 629 aa10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 TPPPO94811 219 aa10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 OR2C1O95371 312 aa10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 MGMTP16455 207 aa10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 NPPBP16860 134 aa10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 PSMB6P28072 239 aa10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 CD80P33681 288 aa10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 EEF1A1P68104 462 aaKnown RBP10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 CLLU1Q5K131 121 aa10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 ZNF620Q6ZNG0 422 aa10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 CLEC1AQ8NC01 280 aa10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 AGBL5Q8NDL9 886 aa10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 SLC37A2Q8TED4 501 aa10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 ARV1Q9H2C2 271 aa10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 HINT3Q9NQE9 182 aaKnown RBP10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 TRBV5-4A0A0C4DH59 114 aa10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 SLC5A10A0PJK1 596 aa10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 CDX4O14627 284 aaPredicted RBP10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 PHF1O43189 567 aaPredicted RBP10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 AKR7A2O43488 359 aa10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 ZFAND5O76080 213 aa10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 NPY4RP50391 375 aa10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 PMPCAQ10713 525 aa10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 ZNF239Q16600 458 aaKnown RBP10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 AANATQ16613 207 aa10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 ABHD17BQ5VST6 288 aa10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 RNLSQ5VYX0 342 aa10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 ACSM5Q6NUN0 579 aa10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 ABHD17CQ6PCB6 329 aa10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 DHRS13Q6UX07 377 aa10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 CCDC190Q86UF4 302 aa10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 OR1S2Q8NGQ3 325 aa10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 TMED6Q8WW62 240 aa10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 CCNL2Q96S94 520 aaPredicted RBP10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 ABHD6Q9BV23 337 aa10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 SGPP1Q9BX95 441 aa10.78□□□□□ -0.68
SYNGAP1-201ENST00000293748 SLC25A19Q9HC21 320 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms