RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 HNF4GQ14541 408 aa11.62□□□□□ -0.55
PTCD1-201ENST00000292478 STAC2Q6ZMT1 411 aa11.62□□□□□ -0.55
PTCD1-201ENST00000292478 TMPRSS11FQ6ZWK6 438 aa11.62□□□□□ -0.55
PTCD1-201ENST00000292478 CARFQ8N187 725 aa11.62□□□□□ -0.55
PTCD1-201ENST00000292478 OR10J5Q8NHC4 309 aa11.62□□□□□ -0.55
PTCD1-201ENST00000292478 DLEC1Q9Y238 1755 aa11.62□□□□□ -0.55
PTCD1-201ENST00000292478 NKX2-2O95096 273 aa11.62□□□□□ -0.55
PTCD1-201ENST00000292478 MSL3P1P0C860 447 aa11.62□□□□□ -0.55
PTCD1-201ENST00000292478 CCL11P51671 97 aa11.62□□□□□ -0.55
PTCD1-201ENST00000292478 RNF4P78317 190 aa11.62□□□□□ -0.55
PTCD1-201ENST00000292478 DGCR2P98153 550 aa11.62□□□□□ -0.55
PTCD1-201ENST00000292478 SLC38A9Q8NBW4 561 aa11.62□□□□□ -0.55
PTCD1-201ENST00000292478 SLC30A7Q8NEW0 376 aa11.62□□□□□ -0.55
PTCD1-201ENST00000292478 OR51A4Q8NGJ6 313 aa11.62□□□□□ -0.55
PTCD1-201ENST00000292478 TERB2Q8NHR7 220 aa11.62□□□□□ -0.55
PTCD1-201ENST00000292478 PIGMQ9H3S5 423 aa11.62□□□□□ -0.55
PTCD1-201ENST00000292478 IL20Q9NYY1 176 aa11.62□□□□□ -0.55
PTCD1-201ENST00000292478 COQ3Q9NZJ6 369 aa11.62□□□□□ -0.55
PTCD1-201ENST00000292478 PRICKLE3O43900 615 aaPredicted RBP11.62□□□□□ -0.55
PTCD1-201ENST00000292478 ANXA7P20073 488 aaKnown RBP11.62□□□□□ -0.55
PTCD1-201ENST00000292478 HCCSP53701 268 aa11.62□□□□□ -0.55
PTCD1-201ENST00000292478 BAXQ07812 192 aa11.62□□□□□ -0.55
PTCD1-201ENST00000292478 GPR173Q9NS66 373 aa11.62□□□□□ -0.55
PTCD1-201ENST00000292478 DECR2Q9NUI1 292 aa11.62□□□□□ -0.55
PTCD1-201ENST00000292478 GPATCH2Q9NW75 528 aa11.62□□□□□ -0.55
PTCD1-201ENST00000292478 MN1Q10571 1320 aaPredicted RBP11.62□□□□□ -0.55
PTCD1-201ENST00000292478 A0A087WUJ7 227 aa11.62□□□□□ -0.55
PTCD1-201ENST00000292478 ZNF732B4DXR9 585 aa11.62□□□□□ -0.55
PTCD1-201ENST00000292478 LINC01387J3KSC0 135 aa11.62□□□□□ -0.55
PTCD1-201ENST00000292478 ST8SIA3O43173 380 aa11.62□□□□□ -0.55
PTCD1-201ENST00000292478 NME2P22392 152 aa11.62□□□□□ -0.55
PTCD1-201ENST00000292478 SHBQ15464 509 aa11.62□□□□□ -0.55
PTCD1-201ENST00000292478 FOXB2Q5VYV0 432 aa11.62□□□□□ -0.55
PTCD1-201ENST00000292478 YRDCQ86U90 279 aaKnown RBP11.62□□□□□ -0.55
PTCD1-201ENST00000292478 C11orf40Q8WZ69 217 aa11.62□□□□□ -0.55
PTCD1-201ENST00000292478 ZMAT3Q9HA38 289 aaKnown RBP11.62□□□□□ -0.55
PTCD1-201ENST00000292478 ZNF225Q9UK10 706 aa11.62□□□□□ -0.55
PTCD1-201ENST00000292478 FOXJ3Q9UPW0 622 aa11.62□□□□□ -0.55
PTCD1-201ENST00000292478 HSPB6O14558 160 aa11.61□□□□□ -0.55
PTCD1-201ENST00000292478 PPT1P50897 306 aa11.61□□□□□ -0.55
PTCD1-201ENST00000292478 WNT3P56703 355 aa11.61□□□□□ -0.55
PTCD1-201ENST00000292478 SOWAHCQ53LP3 525 aaPredicted RBP11.61□□□□□ -0.55
PTCD1-201ENST00000292478 KIRREL2Q6UWL6 708 aa11.61□□□□□ -0.55
PTCD1-201ENST00000292478 CMTM4Q8IZR5 234 aa11.61□□□□□ -0.55
PTCD1-201ENST00000292478 TECTBQ96PL2 329 aa11.61□□□□□ -0.55
PTCD1-201ENST00000292478 TMEFF2Q9UIK5 374 aaPredicted RBP11.61□□□□□ -0.55
PTCD1-201ENST00000292478 A0A1B0GUH1 482 aa11.61□□□□□ -0.55
PTCD1-201ENST00000292478 FITM1A5D6W6 292 aa11.61□□□□□ -0.55
PTCD1-201ENST00000292478 ADRA2CP18825 462 aa11.61□□□□□ -0.55
PTCD1-201ENST00000292478 OMGP23515 440 aa11.61□□□□□ -0.55
PTCD1-201ENST00000292478 SLC25A1P53007 311 aa11.61□□□□□ -0.55
PTCD1-201ENST00000292478 VHLLQ6RSH7 139 aa11.61□□□□□ -0.55
PTCD1-201ENST00000292478 OR5M1Q8NGP8 315 aa11.61□□□□□ -0.55
PTCD1-201ENST00000292478 ZNF764Q96H86 408 aaPredicted RBP11.61□□□□□ -0.55
PTCD1-201ENST00000292478 SIGLEC11Q96RL6 698 aa11.61□□□□□ -0.55
PTCD1-201ENST00000292478 ATF6BQ99941 703 aa11.61□□□□□ -0.55
PTCD1-201ENST00000292478 PBOV1Q9GZY1 135 aa11.61□□□□□ -0.55
PTCD1-201ENST00000292478 BANF2Q9H503 90 aa11.61□□□□□ -0.55
PTCD1-201ENST00000292478 B9D1Q9UPM9 204 aa11.61□□□□□ -0.55
PTCD1-201ENST00000292478 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.61□□□□□ -0.55
PTCD1-201ENST00000292478 A0A0U1RQK1 487 aa11.61□□□□□ -0.55
PTCD1-201ENST00000292478 TNFSF12O43508 249 aa11.61□□□□□ -0.55
PTCD1-201ENST00000292478 SLC2A1P11166 492 aa11.61□□□□□ -0.55
PTCD1-201ENST00000292478 GABRG2P18507 467 aa11.61□□□□□ -0.55
PTCD1-201ENST00000292478 OR13C8Q8NGS7 320 aa11.61□□□□□ -0.55
PTCD1-201ENST00000292478 WSB2Q9NYS7 404 aaPredicted RBP11.61□□□□□ -0.55
PTCD1-201ENST00000292478 C2CD4DB7Z1M9 353 aa11.61□□□□□ -0.55
PTCD1-201ENST00000292478 CBR3O75828 277 aa11.61□□□□□ -0.55
PTCD1-201ENST00000292478 GSTP1P09211 210 aaKnown RBP11.61□□□□□ -0.55
PTCD1-201ENST00000292478 FOLR1P15328 257 aa11.61□□□□□ -0.55
PTCD1-201ENST00000292478 SLC10A1Q14973 349 aa11.61□□□□□ -0.55
PTCD1-201ENST00000292478 SOHLH1Q5JUK2 328 aa11.61□□□□□ -0.55
PTCD1-201ENST00000292478 CST9LP1Q5W188 147 aa11.61□□□□□ -0.55
PTCD1-201ENST00000292478 OR1N1Q8NGS0 311 aa11.61□□□□□ -0.55
PTCD1-201ENST00000292478 LRRC61Q9BV99 259 aa11.61□□□□□ -0.55
PTCD1-201ENST00000292478 OR11A1Q9GZK7 315 aa11.61□□□□□ -0.55
PTCD1-201ENST00000292478 EGLN1Q9GZT9 426 aa11.61□□□□□ -0.55
PTCD1-201ENST00000292478 OPA3Q9H6K4 179 aa11.61□□□□□ -0.55
PTCD1-201ENST00000292478 LTB4R2Q9NPC1 389 aa11.61□□□□□ -0.55
PTCD1-201ENST00000292478 C1QAP02745 245 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 PDGFAP04085 211 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 MRPS34P82930 218 aaKnown RBP11.6□□□□□ -0.55
PTCD1-201ENST00000292478 AKR1C1Q04828 323 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 PCK2Q16822 640 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 C2orf76Q3KRA6 126 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 CATSPERDQ86XM0 798 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 ZNF573Q86YE8 665 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 CCDC74BQ96LY2 380 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 GSX2Q9BZM3 304 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 PLAC1Q9HBJ0 212 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 GPR84Q9NQS5 396 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 RRP8O43159 456 aaKnown RBP11.6□□□□□ -0.55
PTCD1-201ENST00000292478 EIF4EP06730 217 aaKnown RBP11.6□□□□□ -0.55
PTCD1-201ENST00000292478 NME1P15531 152 aaKnown RBP11.6□□□□□ -0.55
PTCD1-201ENST00000292478 KIR2DL3P43628 341 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 GFERP55789 205 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 PCBP4P57723 403 aaKnown RBP11.6□□□□□ -0.55
PTCD1-201ENST00000292478 CDK5Q00535 292 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 BTN1A1Q13410 526 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 AGERQ15109 404 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms