RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 FAM3DQ96BQ1 224 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 SLC41A2Q96JW4 573 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 ZNF251Q9BRH9 671 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 HINT3Q9NQE9 182 aaKnown RBP10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 SLC7A11Q9UPY5 501 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 ASPDHA6ND91 283 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 CBY3A6NI87 242 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 TGOLN2O43493 480 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 FTH1P19P0C7X4 201 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 CCNOP22674 350 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 EIF4EBP2Q13542 120 aaPredicted RBP10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 EXOSC7Q15024 291 aaKnown RBP10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 SSX1Q16384 188 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 C9orf62Q8N4C0 152 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 TMEM105Q8N8V8 129 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 MORN4Q8NDC4 146 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 MIB2Q96AX9 1013 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 MIOXQ9UGB7 285 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 SH3BGRL2Q9UJC5 107 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 ZC3H12DA2A288 527 aaKnown RBP10.35□□□□□ -0.75
NPC1L1-201ENST00000289547 FITM1A5D6W6 292 aa10.35□□□□□ -0.75
NPC1L1-201ENST00000289547 SOD1P00441 154 aa10.35□□□□□ -0.75
NPC1L1-201ENST00000289547 HBE1P02100 147 aa10.35□□□□□ -0.75
NPC1L1-201ENST00000289547 TMPPEQ6ZT21 453 aa10.35□□□□□ -0.75
NPC1L1-201ENST00000289547 C1orf87Q8N0U7 546 aa10.35□□□□□ -0.75
NPC1L1-201ENST00000289547 ZNF740Q8NDX6 193 aa10.35□□□□□ -0.75
NPC1L1-201ENST00000289547 OR10D4PQ8NGN7 298 aa10.35□□□□□ -0.75
NPC1L1-201ENST00000289547 LILRB1Q8NHL6 650 aaPredicted RBP10.35□□□□□ -0.75
NPC1L1-201ENST00000289547 HMGCLL1Q8TB92 370 aa10.35□□□□□ -0.75
NPC1L1-201ENST00000289547 RNF128Q8TEB7 428 aa10.35□□□□□ -0.75
NPC1L1-201ENST00000289547 TMEM255BQ8WV15 326 aa10.35□□□□□ -0.75
NPC1L1-201ENST00000289547 NEURL3Q96EH8 262 aa10.35□□□□□ -0.75
NPC1L1-201ENST00000289547 SLCO5A1Q9H2Y9 848 aa10.35□□□□□ -0.75
NPC1L1-201ENST00000289547 TMPRSS5Q9H3S3 457 aa10.35□□□□□ -0.75
NPC1L1-201ENST00000289547 PLAC1Q9HBJ0 212 aa10.35□□□□□ -0.75
NPC1L1-201ENST00000289547 CYSLTR2Q9NS75 346 aa10.35□□□□□ -0.75
NPC1L1-201ENST00000289547 LILRB5O75023 590 aa10.35□□□□□ -0.75
NPC1L1-201ENST00000289547 TSPAN12O95859 305 aa10.35□□□□□ -0.75
NPC1L1-201ENST00000289547 PSMB6P28072 239 aa10.35□□□□□ -0.75
NPC1L1-201ENST00000289547 RPL23AP62750 156 aaKnown RBP10.35□□□□□ -0.75
NPC1L1-201ENST00000289547 PTOV1Q86YD1 416 aa10.35□□□□□ -0.75
NPC1L1-201ENST00000289547 ALG12Q9BV10 488 aa10.35□□□□□ -0.75
NPC1L1-201ENST00000289547 NGBQ9NPG2 151 aa10.35□□□□□ -0.75
NPC1L1-201ENST00000289547 KLK11Q9UBX7 282 aa10.35□□□□□ -0.75
NPC1L1-201ENST00000289547 PCDHB10Q9UN67 800 aa10.35□□□□□ -0.75
NPC1L1-201ENST00000289547 A0A087WUU8 490 aa10.35□□□□□ -0.75
NPC1L1-201ENST00000289547 ANKRD61A6NGH8 418 aa10.35□□□□□ -0.75
NPC1L1-201ENST00000289547 ID4P47928 161 aa10.35□□□□□ -0.75
NPC1L1-201ENST00000289547 DND1Q8IYX4 353 aaKnown RBP10.35□□□□□ -0.75
NPC1L1-201ENST00000289547 SLC2A12Q8TD20 617 aa10.35□□□□□ -0.75
NPC1L1-201ENST00000289547 MS4A6EQ96DS6 147 aa10.35□□□□□ -0.75
NPC1L1-201ENST00000289547 SCMH1Q96GD3 660 aa10.35□□□□□ -0.75
NPC1L1-201ENST00000289547 CXorf58Q96LI9 332 aa10.35□□□□□ -0.75
NPC1L1-201ENST00000289547 TEAD3Q99594 435 aa10.35□□□□□ -0.75
NPC1L1-201ENST00000289547 STEAP1Q9UHE8 339 aa10.35□□□□□ -0.75
NPC1L1-201ENST00000289547 ZNF638Q14966 1978 aaKnown RBP10.35□□□□□ -0.75
NPC1L1-201ENST00000289547 H3BML4 177 aa10.35□□□□□ -0.75
NPC1L1-201ENST00000289547 CRYBB2P43320 205 aa10.35□□□□□ -0.75
NPC1L1-201ENST00000289547 LINC00303Q3SY05 128 aa10.35□□□□□ -0.75
NPC1L1-201ENST00000289547 OVCH1Q7RTY7 1134 aa10.35□□□□□ -0.75
NPC1L1-201ENST00000289547 OR5D14Q8NGL3 314 aa10.35□□□□□ -0.75
NPC1L1-201ENST00000289547 OR1J2Q8NGS2 313 aa10.35□□□□□ -0.75
NPC1L1-201ENST00000289547 OR13C5Q8NGS8 318 aa10.35□□□□□ -0.75
NPC1L1-201ENST00000289547 PRO1933Q9H354 126 aa10.35□□□□□ -0.75
NPC1L1-201ENST00000289547 EXOSC3Q9NQT5 275 aaKnown RBP10.35□□□□□ -0.75
NPC1L1-201ENST00000289547 C1orf123Q9NWV4 160 aa10.35□□□□□ -0.75
NPC1L1-201ENST00000289547 TET1Q8NFU7 2136 aa10.35□□□□□ -0.75
NPC1L1-201ENST00000289547 SLC16A7O60669 478 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 SERPINE2P07093 398 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 ZGLP1P0C6A0 271 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 HOXA6P31267 233 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 RNF4P78317 190 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 MRPL2Q5T653 305 aaKnown RBP10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 SLC48A1Q6P1K1 146 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 SKA3Q8IX90 412 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 RNF113BQ8IZP6 322 aaKnown RBP10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 SMIM4Q8WVI0 70 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 RBMXL1Q96E39 390 aaKnown RBP10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 TMEM100Q9NV29 134 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 MRPL22Q9NWU5 206 aaKnown RBP10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 DAPP1Q9UN19 280 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 PCDHGA1Q9Y5H4 931 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 TMEM212A6NML5 194 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 A8MXE2 369 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 ZNF354AO60765 605 aaPredicted RBP10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 ZNF883P0CG24 379 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 ADIRFQ15847 76 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 HSD17B13Q7Z5P4 300 aaPredicted RBP10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 ZNF511Q8NB15 262 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 UBAC2Q8NBM4 344 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 DUSP18Q8NEJ0 188 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 SORCS2Q96PQ0 1159 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 NMNAT3Q96T66 252 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 GPR87Q9BY21 358 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 ENY2Q9NPA8 101 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 A4GALTQ9NPC4 353 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 WASF3Q9UPY6 502 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 PTPRZ1P23471 2315 aaPredicted RBP10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 TMEM269A0A1B0GVZ9 245 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 PRRG2O14669 202 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms