RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 ATP23Q9Y6H3 246 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 BTBD17A6NE02 478 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 PPP1R3DO95685 299 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 GABRA1P14867 456 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 CD40LGP29965 261 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 CLDN20P56880 219 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 HSF1Q00613 529 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 FGL1Q08830 312 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 NXNL2Q5VZ03 156 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 FCRLAQ7L513 359 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 OR6X1Q8NH79 312 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 PPP1R35Q8TAP8 253 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 LRR1Q96L50 414 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 DDOQ99489 341 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 PAPOLGQ9BWT3 736 aaKnown RBP7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 JAM3Q9BX67 310 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 CLCF1Q9UBD9 225 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 ZNF835Q9Y2P0 537 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 OR6C65A6NJZ3 312 aa7.49□□□□□ -1.21
PTPDC1-201ENST00000288976 ZNF850A8MQ14 1090 aa7.49□□□□□ -1.21
PTPDC1-201ENST00000288976 SLC16A7O60669 478 aa7.49□□□□□ -1.21
PTPDC1-201ENST00000288976 CCDC71Q8IV32 467 aaPredicted RBP7.49□□□□□ -1.21
PTPDC1-201ENST00000288976 MUS81Q96NY9 551 aa7.49□□□□□ -1.21
PTPDC1-201ENST00000288976 NMNAT2Q9BZQ4 307 aa7.49□□□□□ -1.21
PTPDC1-201ENST00000288976 DECR2Q9NUI1 292 aa7.49□□□□□ -1.21
PTPDC1-201ENST00000288976 KCNIP1Q9NZI2 227 aa7.49□□□□□ -1.21
PTPDC1-201ENST00000288976 A0A1W2PNR3 127 aa7.49□□□□□ -1.21
PTPDC1-201ENST00000288976 A0A1W2PQ09 198 aa7.49□□□□□ -1.21
PTPDC1-201ENST00000288976 AKR7A3O95154 331 aa7.49□□□□□ -1.21
PTPDC1-201ENST00000288976 CD3GP09693 182 aa7.49□□□□□ -1.21
PTPDC1-201ENST00000288976 ERVK-25P63136 954 aa7.49□□□□□ -1.21
PTPDC1-201ENST00000288976 GGTLC2Q14390 218 aa7.49□□□□□ -1.21
PTPDC1-201ENST00000288976 ARIH2OSQ8N7S6 290 aa7.49□□□□□ -1.21
PTPDC1-201ENST00000288976 SCCPDHQ8NBX0 429 aa7.49□□□□□ -1.21
PTPDC1-201ENST00000288976 APH1BQ8WW43 257 aa7.49□□□□□ -1.21
PTPDC1-201ENST00000288976 ZDHHC16Q969W1 377 aa7.49□□□□□ -1.21
PTPDC1-201ENST00000288976 ZMYND19Q96E35 227 aaPredicted RBP7.49□□□□□ -1.21
PTPDC1-201ENST00000288976 MRPS18AQ9NVS2 196 aaKnown RBP7.49□□□□□ -1.21
PTPDC1-201ENST00000288976 FKBP14Q9NWM8 211 aa7.49□□□□□ -1.21
PTPDC1-201ENST00000288976 KLHL9Q9P2J3 617 aa7.49□□□□□ -1.21
PTPDC1-201ENST00000288976 MOKQ9UQ07 419 aa7.49□□□□□ -1.21
PTPDC1-201ENST00000288976 CD8B2A6NJW9 211 aa7.49□□□□□ -1.21
PTPDC1-201ENST00000288976 ZNF716A6NP11 495 aa7.49□□□□□ -1.21
PTPDC1-201ENST00000288976 LRRN3E7EW58 273 aa7.49□□□□□ -1.21
PTPDC1-201ENST00000288976 GPR171O14626 319 aa7.49□□□□□ -1.21
PTPDC1-201ENST00000288976 DHFRP00374 187 aa7.49□□□□□ -1.21
PTPDC1-201ENST00000288976 GSTP1P09211 210 aaKnown RBP7.49□□□□□ -1.21
PTPDC1-201ENST00000288976 TGFBR2P37173 567 aa7.49□□□□□ -1.21
PTPDC1-201ENST00000288976 HTR5AP47898 357 aa7.49□□□□□ -1.21
PTPDC1-201ENST00000288976 CLDN17P56750 224 aa7.49□□□□□ -1.21
PTPDC1-201ENST00000288976 S100A10P60903 97 aa7.49□□□□□ -1.21
PTPDC1-201ENST00000288976 POU4F2Q12837 409 aa7.49□□□□□ -1.21
PTPDC1-201ENST00000288976 SLC17A1Q14916 467 aa7.49□□□□□ -1.21
PTPDC1-201ENST00000288976 HIST3H3Q16695 136 aa7.49□□□□□ -1.21
PTPDC1-201ENST00000288976 ACSM5Q6NUN0 579 aa7.49□□□□□ -1.21
PTPDC1-201ENST00000288976 UGT2A3Q6UWM9 527 aa7.49□□□□□ -1.21
PTPDC1-201ENST00000288976 ZNF813Q6ZN06 617 aa7.49□□□□□ -1.21
PTPDC1-201ENST00000288976 KCTD9Q7L273 389 aa7.49□□□□□ -1.21
PTPDC1-201ENST00000288976 FAM57AQ8TBR7 257 aa7.49□□□□□ -1.21
PTPDC1-201ENST00000288976 TMEM54Q969K7 222 aa7.49□□□□□ -1.21
PTPDC1-201ENST00000288976 KATNB1Q9BVA0 655 aa7.49□□□□□ -1.21
PTPDC1-201ENST00000288976 PPP1R14DQ9NXH3 145 aa7.49□□□□□ -1.21
PTPDC1-201ENST00000288976 NDUFA13Q9P0J0 144 aa7.49□□□□□ -1.21
PTPDC1-201ENST00000288976 TRAF3IP2O43734 574 aaPredicted RBP7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 SS18L1O75177 396 aaPredicted RBP7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 MAS1P04201 325 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 CRHP06850 196 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 IGFBP1P08833 259 aaPredicted RBP7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 SLC2A5P22732 501 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 EPHA2P29317 976 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 SRP14P37108 136 aaKnown RBP7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 RIDAP52758 137 aaKnown RBP7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 C19orf57Q0VDD7 668 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 RSU1Q15404 277 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 OR8B8Q15620 311 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 RNLSQ5VYX0 342 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 OR2A2Q6IF42 318 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 TMEM99Q8N816 258 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 WNT2BQ93097 391 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 TOMM40LQ969M1 308 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 ZNF696Q9H7X3 374 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 PCDHB16Q9NRJ7 776 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 CNOT2Q9NZN8 540 aaKnown RBP7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 DCHS1Q96JQ0 3298 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 ANKRD30BLA7E2S9 258 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 PRKYO43930 277 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 RPL11P62913 178 aaKnown RBP7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 EDDM3AQ14507 147 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 NDUFA5Q16718 116 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 MESTQ5EB52 335 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 PLEKHG7Q6ZR37 379 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 CREB3L2Q70SY1 520 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 EGFL6Q8IUX8 553 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 CISD2Q8N5K1 135 aaKnown RBP7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 SLC37A3Q8NCC5 494 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 NOXO1Q8NFA2 376 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 OR2T4Q8NH00 348 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 NDNFQ8TB73 568 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 ITFG2Q969R8 447 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 GMPPAQ96IJ6 420 aaPredicted RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms