RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 SLCO1A2P46721 670 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 CRISP1P54107 249 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 VSX2P58304 361 aaPredicted RBP2.35□□□□□ -2.03
CHD1-201ENST00000284049 IL18R1Q13478 541 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 PEX26Q7Z412 305 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 SPEM1Q8N4L4 309 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 SMARCD2Q92925 531 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 NAT6Q93015 286 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 DGCR14Q96DF8 476 aaKnown RBP2.35□□□□□ -2.03
CHD1-201ENST00000284049 CGREF1Q99674 301 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 NXF3Q9H4D5 531 aaKnown RBP2.35□□□□□ -2.03
CHD1-201ENST00000284049 EXOSC3Q9NQT5 275 aaKnown RBP2.35□□□□□ -2.03
CHD1-201ENST00000284049 C8orf4Q9NR00 106 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 CTPS2Q9NRF8 586 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 STMN3Q9NZ72 180 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 RCL1Q9Y2P8 373 aaKnown RBP2.35□□□□□ -2.03
CHD1-201ENST00000284049 COL4A4P53420 1690 aaPredicted RBP2.35□□□□□ -2.03
CHD1-201ENST00000284049 EP400Q96L91 3159 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 OTOFQ9HC10 1997 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 NSG1A0A0A6YYJ2 146 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 ZNF816-ZNF321PA0A0X1KG74 233 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 NPIPB8E9PQR5 432 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 H3BN98 237 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 INSIG1O15503 277 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 SEC24AO95486 1093 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 TDP2O95551 362 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 HPP00738 406 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 CD55P08174 381 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 RPS12P25398 132 aaKnown RBP2.35□□□□□ -2.03
CHD1-201ENST00000284049 CDKN2AP42771 156 aaKnown RBP2.35□□□□□ -2.03
CHD1-201ENST00000284049 RPL34P49207 117 aaKnown RBP2.35□□□□□ -2.03
CHD1-201ENST00000284049 CDK9P50750 372 aaKnown RBP2.35□□□□□ -2.03
CHD1-201ENST00000284049 RPL8P62917 257 aaKnown RBP2.35□□□□□ -2.03
CHD1-201ENST00000284049 SRPXP78539 464 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 BCL2L1Q07817 233 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 DUSP7Q16829 419 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 C5orf64Q2M2E5 130 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 COX19Q49B96 90 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 TMIGD1Q6UXZ0 262 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 USP50Q70EL3 339 aaPredicted RBP2.35□□□□□ -2.03
CHD1-201ENST00000284049 RAB43Q86YS6 212 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 ZFP82Q8N141 532 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 CYP4Z2PQ8N1L4 340 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 POC1AQ8NBT0 407 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 OR10G7Q8NGN6 311 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 RNF133Q8WVZ7 376 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 C22orf15Q8WYQ4 148 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 OR5M11Q96RB7 305 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 MRPL45Q9BRJ2 306 aaKnown RBP2.35□□□□□ -2.03
CHD1-201ENST00000284049 QTRT1Q9BXR0 403 aaKnown RBP2.35□□□□□ -2.03
CHD1-201ENST00000284049 TSGA10Q9BZW7 698 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 UBE2ZQ9H832 354 aaPredicted RBP2.35□□□□□ -2.03
CHD1-201ENST00000284049 ASCL3Q9NQ33 180 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 IL37Q9NZH6 218 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 ING4Q9UNL4 249 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 USH1CQ9Y6N9 552 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 NARSO43776 548 aaKnown RBP2.35□□□□□ -2.03
CHD1-201ENST00000284049 ADAP1O75689 374 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 CLDN1O95832 211 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 PTHP01270 115 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 HBE1P02100 147 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 GPIP06744 558 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 KLK1P06870 262 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 ACAA1P09110 424 aaPredicted RBP2.35□□□□□ -2.03
CHD1-201ENST00000284049 GATA1P15976 413 aaPredicted RBP2.35□□□□□ -2.03
CHD1-201ENST00000284049 PRKACGP22612 351 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 PAFAH1B2P68402 229 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 LAGE3Q14657 143 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 GINS1Q14691 196 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 THEM4Q5T1C6 240 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 RNLSQ5VYX0 342 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 TRIM40Q6P9F5 258 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 ZNF738Q8NE65 137 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 OR51F2Q8NH61 342 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 TFGQ92734 400 aaPredicted RBP2.35□□□□□ -2.03
CHD1-201ENST00000284049 C10orf90Q96M02 699 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 ULBP1Q9BZM6 244 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 SLC22A4Q9H015 551 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 PPDPFQ9H3Y8 114 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 EHFQ9NZC4 300 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 CLEC2DQ9UHP7 191 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 ZNF221Q9UK13 617 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 C14orf166Q9Y224 244 aaKnown RBP2.35□□□□□ -2.03
CHD1-201ENST00000284049 LSM5Q9Y4Y9 91 aaKnown RBP2.35□□□□□ -2.03
CHD1-201ENST00000284049 C9J4A7 227 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 TCAPO15273 167 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 FZD7O75084 574 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 SMIM24O75264 130 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 SLC2A10O95528 541 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 TRIM49P0CI25 452 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 TRIM49CP0CI26 452 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 PVRP15151 417 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 MYL9P24844 172 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 DCTP40126 519 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 CEACAM3P40198 252 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 NHLH1Q02575 133 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 KLRB1Q12918 225 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 VGLL4Q14135 290 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 LINGO4Q6UY18 593 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 ABHD13Q7L211 337 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms