RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 DEFB124Q8NES8 71 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 OR6N1Q8NGY5 312 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 SYNPRQ8TBG9 265 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 RAB40AQ8WXH6 277 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 YIPF5Q969M3 257 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 S100A16Q96FQ6 103 aaKnown RBP8.5□□□□□ -1.05
TRIM55-201ENST00000276573 ADGRG7Q96K78 797 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 SFXN2Q96NB2 322 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 FAM173AQ9BQD7 235 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 RNF121Q9H920 327 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 NPAP1Q9NZP6 1156 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 ABI3Q9P2A4 366 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 STEAP1Q9UHE8 339 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 BOKQ9UMX3 212 aaPredicted RBP8.5□□□□□ -1.05
TRIM55-201ENST00000276573 DMDP11532 3685 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 FAM240BA0A1B0GVZ2 78 aa8.49□□□□□ -1.05
TRIM55-201ENST00000276573 P2RY10O00398 339 aa8.49□□□□□ -1.05
TRIM55-201ENST00000276573 TFECO14948 347 aaPredicted RBP8.49□□□□□ -1.05
TRIM55-201ENST00000276573 UBCP0CG48 685 aaKnown RBP8.49□□□□□ -1.05
TRIM55-201ENST00000276573 CFPP27918 469 aa8.49□□□□□ -1.05
TRIM55-201ENST00000276573 GUCA1AP43080 201 aaPredicted RBP8.49□□□□□ -1.05
TRIM55-201ENST00000276573 GFRA1P56159 465 aa8.49□□□□□ -1.05
TRIM55-201ENST00000276573 SCAND1P57086 179 aa8.49□□□□□ -1.05
TRIM55-201ENST00000276573 LSM6P62312 80 aaKnown RBP8.49□□□□□ -1.05
TRIM55-201ENST00000276573 DGCR2P98153 550 aa8.49□□□□□ -1.05
TRIM55-201ENST00000276573 BCL2L15Q5TBC7 163 aa8.49□□□□□ -1.05
TRIM55-201ENST00000276573 PLET1Q6UQ28 207 aa8.49□□□□□ -1.05
TRIM55-201ENST00000276573 SERPINA12Q8IW75 414 aa8.49□□□□□ -1.05
TRIM55-201ENST00000276573 IZUMO1Q8IYV9 350 aa8.49□□□□□ -1.05
TRIM55-201ENST00000276573 IL22RA1Q8N6P7 574 aa8.49□□□□□ -1.05
TRIM55-201ENST00000276573 OR2M7Q8NG81 312 aa8.49□□□□□ -1.05
TRIM55-201ENST00000276573 OR13C3Q8NGS6 347 aa8.49□□□□□ -1.05
TRIM55-201ENST00000276573 OR2V1Q8NHB1 315 aa8.49□□□□□ -1.05
TRIM55-201ENST00000276573 FER1L6-AS2Q96M78 137 aa8.49□□□□□ -1.05
TRIM55-201ENST00000276573 PBOV1Q9GZY1 135 aa8.49□□□□□ -1.05
TRIM55-201ENST00000276573 NIPAL2Q9H841 368 aa8.49□□□□□ -1.05
TRIM55-201ENST00000276573 POLR1DQ9Y2S0 133 aa8.49□□□□□ -1.05
TRIM55-201ENST00000276573 PCNX2A6NKB5 2137 aa8.49□□□□□ -1.05
TRIM55-201ENST00000276573 CACNA1CQ13936 2221 aa8.49□□□□□ -1.05
TRIM55-201ENST00000276573 MED12Q93074 2177 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 DOCK10Q96BY6 2186 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 LOC107986453A0A1B0GWG9 222 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 MEGF11A6BM72 1044 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.48□□□□□ -1.05
TRIM55-201ENST00000276573 ZNF878C9JN71 531 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 DHHO43323 396 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 SULT1B1O43704 296 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 CXCL13O43927 109 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 TTRP02766 147 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 CD3GP09693 182 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 FSTP19883 344 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 CLDN15P56746 228 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 TAF13Q15543 124 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 FAM166AQ6J272 317 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 FOXL2NBQ6ZUU3 175 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 AKAP14Q86UN6 197 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 GLCCI1Q86VQ1 547 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 C20orf196Q8IYI0 205 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 HAVCR1Q96D42 359 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 DDX28Q9NUL7 540 aaKnown RBP8.48□□□□□ -1.05
TRIM55-201ENST00000276573 TAS2R4Q9NYW5 299 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 PLA2G3Q9NZ20 509 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 NLKQ9UBE8 527 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 ASH2LQ9UBL3 628 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 CKLFQ9UBR5 152 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 FOXD3Q9UJU5 478 aaPredicted RBP8.48□□□□□ -1.05
TRIM55-201ENST00000276573 WDFY4Q6ZS81 3184 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 NCKAP5O14513 1909 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 SPAARA0A1B0GVQ0 90 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 ZNF716A6NP11 495 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 LINC01387J3KSC0 135 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 SLC17A2O00624 439 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 RER1O15258 196 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 LMX1BO60663 402 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 ACSM4P0C7M7 580 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 FTH1P19P0C7X4 201 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 POU3F2P20265 443 aaPredicted RBP8.48□□□□□ -1.05
TRIM55-201ENST00000276573 CTSSP25774 331 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 CD82P27701 267 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 HSD11B1P28845 292 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 SRP9P49458 86 aaKnown RBP8.48□□□□□ -1.05
TRIM55-201ENST00000276573 SELENOPP49908 381 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 TPTEP56180 551 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 OR1C1Q15619 314 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 C2orf76Q3KRA6 126 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 RSBN1Q5VWQ0 802 aaPredicted RBP8.48□□□□□ -1.05
TRIM55-201ENST00000276573 GLT8D1Q68CQ7 371 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 LINC00696Q6ZRV3 163 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 DTX1Q86Y01 620 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 SULF2Q8IWU5 870 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 OR51D1Q8NGF3 324 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 ROBO4Q8WZ75 1007 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 PNPLA2Q96AD5 504 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 ZNF775Q96BV0 537 aaPredicted RBP8.48□□□□□ -1.05
TRIM55-201ENST00000276573 FGGYQ96C11 551 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 MARVELD1Q9BSK0 173 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 ZNF416Q9BWM5 594 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 NELFAQ9H3P2 528 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 PNRC2Q9NPJ4 139 aaKnown RBP8.48□□□□□ -1.05
TRIM55-201ENST00000276573 ZNF275Q9NSD4 429 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms