RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 SAMD8Q96LT4 415 aa8.32□□□□□ -1.08
PDGFC-201ENST00000274071 INTS14Q96SY0 518 aa8.32□□□□□ -1.08
PDGFC-201ENST00000274071 ALKBH7Q9BT30 221 aaPredicted RBP8.32□□□□□ -1.08
PDGFC-201ENST00000274071 OR2J1Q9GZK6 312 aa8.32□□□□□ -1.08
PDGFC-201ENST00000274071 SLC5A7Q9GZV3 580 aa8.32□□□□□ -1.08
PDGFC-201ENST00000274071 INPP5EQ9NRR6 644 aa8.32□□□□□ -1.08
PDGFC-201ENST00000274071 CHD3Q12873 2000 aaKnown RBP8.32□□□□□ -1.08
PDGFC-201ENST00000274071 SLC38A8A6NNN8 435 aa8.32□□□□□ -1.08
PDGFC-201ENST00000274071 M0QYG6 137 aa8.32□□□□□ -1.08
PDGFC-201ENST00000274071 NDUFS8O00217 210 aa8.32□□□□□ -1.08
PDGFC-201ENST00000274071 PEX12O00623 359 aa8.32□□□□□ -1.08
PDGFC-201ENST00000274071 GRM6O15303 877 aa8.32□□□□□ -1.08
PDGFC-201ENST00000274071 PAPLNO95428 1278 aa8.32□□□□□ -1.08
PDGFC-201ENST00000274071 EPPINO95925 133 aa8.32□□□□□ -1.08
PDGFC-201ENST00000274071 PNPP00491 289 aa8.32□□□□□ -1.08
PDGFC-201ENST00000274071 POLR2HP52434 150 aaKnown RBP8.32□□□□□ -1.08
PDGFC-201ENST00000274071 DCAF7P61962 342 aa8.32□□□□□ -1.08
PDGFC-201ENST00000274071 CDK5R1Q15078 307 aa8.32□□□□□ -1.08
PDGFC-201ENST00000274071 TP53I3Q53FA7 332 aa8.32□□□□□ -1.08
PDGFC-201ENST00000274071 UNQ9370/PRO34162Q6UXP9 181 aa8.32□□□□□ -1.08
PDGFC-201ENST00000274071 GRASPQ7Z6J2 395 aaPredicted RBP8.32□□□□□ -1.08
PDGFC-201ENST00000274071 CACUL1Q86Y37 369 aa8.32□□□□□ -1.08
PDGFC-201ENST00000274071 ZNF100Q8IYN0 542 aa8.32□□□□□ -1.08
PDGFC-201ENST00000274071 DND1Q8IYX4 353 aaKnown RBP8.32□□□□□ -1.08
PDGFC-201ENST00000274071 TMEM86AQ8N2M4 240 aa8.32□□□□□ -1.08
PDGFC-201ENST00000274071 C10orf53Q8N6V4 93 aa8.32□□□□□ -1.08
PDGFC-201ENST00000274071 OR2T33Q8NG76 320 aa8.32□□□□□ -1.08
PDGFC-201ENST00000274071 OR56B2PQ8NGI1 322 aa8.32□□□□□ -1.08
PDGFC-201ENST00000274071 RAB39BQ96DA2 213 aa8.32□□□□□ -1.08
PDGFC-201ENST00000274071 SEH1LQ96EE3 360 aa8.32□□□□□ -1.08
PDGFC-201ENST00000274071 GPR174Q9BXC1 333 aa8.32□□□□□ -1.08
PDGFC-201ENST00000274071 A4GALTQ9NPC4 353 aa8.32□□□□□ -1.08
PDGFC-201ENST00000274071 SRPK3Q9UPE1 567 aa8.32□□□□□ -1.08
PDGFC-201ENST00000274071 RNF24Q9Y225 148 aa8.32□□□□□ -1.08
PDGFC-201ENST00000274071 POLR3KQ9Y2Y1 108 aaPredicted RBP8.32□□□□□ -1.08
PDGFC-201ENST00000274071 PRG3Q9Y2Y8 225 aaPredicted RBP8.32□□□□□ -1.08
PDGFC-201ENST00000274071 MRPS23Q9Y3D9 190 aaKnown RBP8.32□□□□□ -1.08
PDGFC-201ENST00000274071 MYBPHLA2RUH7 354 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 SYNDIG1LA6NDD5 238 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 NME2P1O60361 137 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 UBE2KP61086 200 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 IL13RA1P78552 427 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 FOXK1P85037 733 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 UPP1Q16831 310 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 TMEM268Q5VZI3 342 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 NXPE4Q6UWF7 544 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 SLC35D2Q76EJ3 337 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 LYG2Q86SG7 212 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 RFLNBQ8N5W9 214 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 TMEM104Q8NE00 496 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 PCED1BQ96HM7 432 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 TP53RKQ96S44 253 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 PHB2Q99623 299 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 VPS25Q9BRG1 176 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 SLC2A8Q9NY64 477 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 OR5AC2Q9NZP5 309 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 IL17CQ9P0M4 197 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 B3GAT1Q9P2W7 334 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 YBX2Q9Y2T7 364 aaKnown RBP8.31□□□□□ -1.08
PDGFC-201ENST00000274071 LOC105371242A0A075B767 164 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 A0A087WV62 115 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 A0A087WWC5 75 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 DOK2O60496 412 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 HPRT1P00492 218 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 AMY2AP04746 511 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 FURINP09958 794 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 FCARP24071 287 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 GPR4P46093 362 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 SLC6A12P48065 614 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 LBX1P52954 281 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 MS4A13Q5J8X5 152 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 PIP5KL1Q5T9C9 394 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 PRPF38BQ5VTL8 546 aaKnown RBP8.31□□□□□ -1.08
PDGFC-201ENST00000274071 RTL6Q6ICC9 239 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 COMMD1Q8N668 190 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 PLPP5Q8NEB5 264 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 KLHDC9Q8NEP7 349 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 OR5T1Q8NG75 326 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 CLP1Q92989 425 aaKnown RBP8.31□□□□□ -1.08
PDGFC-201ENST00000274071 TSLPQ969D9 159 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 BOD1Q96IK1 185 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 PRRC1Q96M27 445 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 WFIKKN1Q96NZ8 548 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 ZNF607Q96SK3 696 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 TRIM2Q9C040 744 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 CST11Q9H112 138 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 CXorf36Q9H7Y0 433 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 RNF186Q9NXI6 227 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 GSKIPQ9P0R6 139 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 YLPM1P49750 1951 aaKnown RBP8.31□□□□□ -1.08
PDGFC-201ENST00000274071 TTC3P53804 2025 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 TRBV2A0A0J9YWF9 115 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 H3BQ15 152 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 B3GAT3O94766 335 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 ZFPL1O95159 310 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 CNOT4O95628 575 aaKnown RBP8.31□□□□□ -1.08
PDGFC-201ENST00000274071 EDNRAP25101 427 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 CHRNB4P30926 498 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 PGFP49763 221 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 LTBQ06643 244 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms