RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 SLC35E2P0CK97 266 aa11.61□□□□□ -0.55
COL8A1-202ENST00000273342 GNALP38405 381 aa11.61□□□□□ -0.55
COL8A1-202ENST00000273342 TDGQ13569 410 aa11.61□□□□□ -0.55
COL8A1-202ENST00000273342 ELAVL1Q15717 326 aaKnown RBP11.61□□□□□ -0.55
COL8A1-202ENST00000273342 SMAD2Q15796 467 aaKnown RBP11.61□□□□□ -0.55
COL8A1-202ENST00000273342 GFOD2Q3B7J2 385 aa11.61□□□□□ -0.55
COL8A1-202ENST00000273342 AVPI1Q5T686 147 aa11.61□□□□□ -0.55
COL8A1-202ENST00000273342 LYG2Q86SG7 212 aa11.61□□□□□ -0.55
COL8A1-202ENST00000273342 ZNF321PQ8N8H1 164 aa11.61□□□□□ -0.55
COL8A1-202ENST00000273342 TMEM229BQ8NBD8 167 aa11.61□□□□□ -0.55
COL8A1-202ENST00000273342 OR13C3Q8NGS6 347 aa11.61□□□□□ -0.55
COL8A1-202ENST00000273342 OTOSQ8NHW6 89 aa11.61□□□□□ -0.55
COL8A1-202ENST00000273342 ASB5Q8WWX0 329 aa11.61□□□□□ -0.55
COL8A1-202ENST00000273342 MRGPRFQ96AM1 343 aa11.61□□□□□ -0.55
COL8A1-202ENST00000273342 ZC3H10Q96K80 434 aaKnown RBP11.61□□□□□ -0.55
COL8A1-202ENST00000273342 PHB2Q99623 299 aa11.61□□□□□ -0.55
COL8A1-202ENST00000273342 ALX4Q9H161 411 aaPredicted RBP11.61□□□□□ -0.55
COL8A1-202ENST00000273342 LYRM4Q9HD34 91 aa11.61□□□□□ -0.55
COL8A1-202ENST00000273342 GDE1Q9NZC3 331 aa11.61□□□□□ -0.55
COL8A1-202ENST00000273342 EPHA6Q9UF33 1036 aa11.61□□□□□ -0.55
COL8A1-202ENST00000273342 HEBP2Q9Y5Z4 205 aa11.61□□□□□ -0.55
COL8A1-202ENST00000273342 OR5K4A6NMS3 321 aa11.61□□□□□ -0.55
COL8A1-202ENST00000273342 METTL12A8MUP2 240 aa11.61□□□□□ -0.55
COL8A1-202ENST00000273342 GPR89AB7ZAQ6 455 aa11.61□□□□□ -0.55
COL8A1-202ENST00000273342 APOC1P02654 83 aa11.61□□□□□ -0.55
COL8A1-202ENST00000273342 GPR89BP0CG08 455 aa11.61□□□□□ -0.55
COL8A1-202ENST00000273342 SLC17A1Q14916 467 aa11.61□□□□□ -0.55
COL8A1-202ENST00000273342 ZNF585AQ6P3V2 769 aa11.61□□□□□ -0.55
COL8A1-202ENST00000273342 FAM160A2Q8N612 972 aaPredicted RBP11.61□□□□□ -0.55
COL8A1-202ENST00000273342 OR1M1Q8NGA1 313 aa11.61□□□□□ -0.55
COL8A1-202ENST00000273342 OR2I1PQ8NGU4 316 aa11.61□□□□□ -0.55
COL8A1-202ENST00000273342 ARL11Q969Q4 196 aa11.61□□□□□ -0.55
COL8A1-202ENST00000273342 LRFN5Q96NI6 719 aa11.61□□□□□ -0.55
COL8A1-202ENST00000273342 SLC19A3Q9BZV2 496 aa11.61□□□□□ -0.55
COL8A1-202ENST00000273342 CENPMQ9NSP4 180 aa11.61□□□□□ -0.55
COL8A1-202ENST00000273342 HIF3AQ9Y2N7 669 aa11.61□□□□□ -0.55
COL8A1-202ENST00000273342 TRBV23-1A0A0A0MS06 115 aa11.6□□□□□ -0.55
COL8A1-202ENST00000273342 ARPC4-TTLL3A0A0A6YYG9 625 aa11.6□□□□□ -0.55
COL8A1-202ENST00000273342 ICOSLGO75144 302 aa11.6□□□□□ -0.55
COL8A1-202ENST00000273342 FBXO24O75426 580 aa11.6□□□□□ -0.55
COL8A1-202ENST00000273342 CD2P06729 351 aa11.6□□□□□ -0.55
COL8A1-202ENST00000273342 ACAA1P09110 424 aaPredicted RBP11.6□□□□□ -0.55
COL8A1-202ENST00000273342 NME2P22392 152 aa11.6□□□□□ -0.55
COL8A1-202ENST00000273342 ZBTB25P24278 435 aa11.6□□□□□ -0.55
COL8A1-202ENST00000273342 BAP18Q8IXM2 172 aa11.6□□□□□ -0.55
COL8A1-202ENST00000273342 AVL9Q8NBF6 648 aa11.6□□□□□ -0.55
COL8A1-202ENST00000273342 METTL21AQ8WXB1 218 aa11.6□□□□□ -0.55
COL8A1-202ENST00000273342 PIK3IP1Q96FE7 263 aa11.6□□□□□ -0.55
COL8A1-202ENST00000273342 ADOQ96SZ5 270 aa11.6□□□□□ -0.55
COL8A1-202ENST00000273342 RTN4RQ9BZR6 473 aa11.6□□□□□ -0.55
COL8A1-202ENST00000273342 UQCC1Q9NVA1 299 aa11.6□□□□□ -0.55
COL8A1-202ENST00000273342 ZMAT5Q9UDW3 170 aaKnown RBP11.6□□□□□ -0.55
COL8A1-202ENST00000273342 CELSR3Q9NYQ7 3312 aa11.6□□□□□ -0.55
COL8A1-202ENST00000273342 WIPF3A6NGB9 483 aa11.6□□□□□ -0.55
COL8A1-202ENST00000273342 IFNA6P05013 189 aa11.6□□□□□ -0.55
COL8A1-202ENST00000273342 ZP2Q05996 745 aa11.6□□□□□ -0.55
COL8A1-202ENST00000273342 KIR2DS3Q14952 304 aa11.6□□□□□ -0.55
COL8A1-202ENST00000273342 VWA2Q5GFL6 755 aa11.6□□□□□ -0.55
COL8A1-202ENST00000273342 TMEM184AQ6ZMB5 413 aa11.6□□□□□ -0.55
COL8A1-202ENST00000273342 ASB16Q96NS5 453 aa11.6□□□□□ -0.55
COL8A1-202ENST00000273342 GAL3ST4Q96RP7 486 aa11.6□□□□□ -0.55
COL8A1-202ENST00000273342 C20orf24Q9BUV8 137 aa11.6□□□□□ -0.55
COL8A1-202ENST00000273342 ZFP57Q9NU63 452 aa11.6□□□□□ -0.55
COL8A1-202ENST00000273342 MRPS33Q9Y291 106 aaKnown RBP11.6□□□□□ -0.55
COL8A1-202ENST00000273342 KCNK7Q9Y2U2 307 aa11.6□□□□□ -0.55
COL8A1-202ENST00000273342 TDRD6O60522 2096 aaKnown RBP11.6□□□□□ -0.55
COL8A1-202ENST00000273342 EFCAB7A8K855 629 aa11.6□□□□□ -0.55
COL8A1-202ENST00000273342 DAOP14920 347 aa11.6□□□□□ -0.55
COL8A1-202ENST00000273342 MUC1P15941 1255 aaPredicted RBP11.6□□□□□ -0.55
COL8A1-202ENST00000273342 C5AR1P21730 350 aa11.6□□□□□ -0.55
COL8A1-202ENST00000273342 PSMB6P28072 239 aa11.6□□□□□ -0.55
COL8A1-202ENST00000273342 NPY4RP50391 375 aa11.6□□□□□ -0.55
COL8A1-202ENST00000273342 PPT1P50897 306 aa11.6□□□□□ -0.55
COL8A1-202ENST00000273342 ZNF345Q14585 488 aa11.6□□□□□ -0.55
COL8A1-202ENST00000273342 FAM209BQ5JX69 171 aa11.6□□□□□ -0.55
COL8A1-202ENST00000273342 RNF144BQ7Z419 303 aa11.6□□□□□ -0.55
COL8A1-202ENST00000273342 LRRC75AQ8NAA5 344 aa11.6□□□□□ -0.55
COL8A1-202ENST00000273342 ZSCAN4Q8NAM6 433 aaPredicted RBP11.6□□□□□ -0.55
COL8A1-202ENST00000273342 ISOC2Q96AB3 205 aa11.6□□□□□ -0.55
COL8A1-202ENST00000273342 TCEAL2Q9H3H9 227 aaPredicted RBP11.6□□□□□ -0.55
COL8A1-202ENST00000273342 NIT2Q9NQR4 276 aa11.6□□□□□ -0.55
COL8A1-202ENST00000273342 H0YIZ8 118 aa11.59□□□□□ -0.55
COL8A1-202ENST00000273342 P2RY10O00398 339 aa11.59□□□□□ -0.55
COL8A1-202ENST00000273342 HCRTR2O43614 444 aa11.59□□□□□ -0.55
COL8A1-202ENST00000273342 ZNF432O94892 652 aa11.59□□□□□ -0.55
COL8A1-202ENST00000273342 SNAPINO95295 136 aa11.59□□□□□ -0.55
COL8A1-202ENST00000273342 CELA2BP08218 269 aaPredicted RBP11.59□□□□□ -0.55
COL8A1-202ENST00000273342 TPT1P13693 172 aaKnown RBP11.59□□□□□ -0.55
COL8A1-202ENST00000273342 CTLA4P16410 223 aa11.59□□□□□ -0.55
COL8A1-202ENST00000273342 CD80P33681 288 aa11.59□□□□□ -0.55
COL8A1-202ENST00000273342 SLC25A1P53007 311 aa11.59□□□□□ -0.55
COL8A1-202ENST00000273342 C1orf61Q13536 156 aa11.59□□□□□ -0.55
COL8A1-202ENST00000273342 ZNF141Q15928 474 aa11.59□□□□□ -0.55
COL8A1-202ENST00000273342 STOML3Q8TAV4 291 aa11.59□□□□□ -0.55
COL8A1-202ENST00000273342 C14orf79Q96F83 325 aa11.59□□□□□ -0.55
COL8A1-202ENST00000273342 DGAT2Q96PD7 388 aa11.59□□□□□ -0.55
COL8A1-202ENST00000273342 OR8B4Q96RC9 309 aa11.59□□□□□ -0.55
COL8A1-202ENST00000273342 NUDT9Q9BW91 350 aa11.59□□□□□ -0.55
COL8A1-202ENST00000273342 OR10A5Q9H207 317 aa11.59□□□□□ -0.55
COL8A1-202ENST00000273342 MED12Q93074 2177 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms