RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 LOC100289279A0A1B0GTE1 492 aa13.16□□□□□ -0.3
CNOT9-201ENST00000273064 NAP1L6A6NFF2 107 aa13.16□□□□□ -0.3
CNOT9-201ENST00000273064 RER1O15258 196 aa13.16□□□□□ -0.3
CNOT9-201ENST00000273064 HPXP02790 462 aa13.16□□□□□ -0.3
CNOT9-201ENST00000273064 SLC26A5P58743 744 aa13.16□□□□□ -0.3
CNOT9-201ENST00000273064 HLA-BQ31612 363 aa13.16□□□□□ -0.3
CNOT9-201ENST00000273064 FAM74A1Q5RGS3 127 aa13.16□□□□□ -0.3
CNOT9-201ENST00000273064 CCDC36Q8IYA8 594 aa13.16□□□□□ -0.3
CNOT9-201ENST00000273064 EXOGQ9Y2C4 368 aaKnown RBP13.16□□□□□ -0.3
CNOT9-201ENST00000273064 LRP12Q9Y561 859 aa13.16□□□□□ -0.3
CNOT9-201ENST00000273064 ABCA4P78363 2273 aa13.16□□□□□ -0.3
CNOT9-201ENST00000273064 CUL9Q8IWT3 2517 aa13.16□□□□□ -0.3
CNOT9-201ENST00000273064 A0A0B4J2A0 478 aa13.15□□□□□ -0.3
CNOT9-201ENST00000273064 GPR171O14626 319 aa13.15□□□□□ -0.3
CNOT9-201ENST00000273064 MBTPS2O43462 519 aa13.15□□□□□ -0.3
CNOT9-201ENST00000273064 LINC00271P0C7V0 271 aa13.15□□□□□ -0.3
CNOT9-201ENST00000273064 GAAP10253 952 aa13.15□□□□□ -0.3
CNOT9-201ENST00000273064 NR2C1P13056 603 aa13.15□□□□□ -0.3
CNOT9-201ENST00000273064 RPA2P15927 270 aa13.15□□□□□ -0.3
CNOT9-201ENST00000273064 NUDT1P36639 197 aa13.15□□□□□ -0.3
CNOT9-201ENST00000273064 GLP1RP43220 463 aa13.15□□□□□ -0.3
CNOT9-201ENST00000273064 PLP2Q04941 152 aa13.15□□□□□ -0.3
CNOT9-201ENST00000273064 TCEAL6Q6IPX3 200 aa13.15□□□□□ -0.3
CNOT9-201ENST00000273064 OPN5Q6U736 354 aa13.15□□□□□ -0.3
CNOT9-201ENST00000273064 SLC5A7Q9GZV3 580 aa13.15□□□□□ -0.3
CNOT9-201ENST00000273064 SHPKQ9UHJ6 478 aa13.15□□□□□ -0.3
CNOT9-201ENST00000273064 MEX3AA1L020 520 aaKnown RBP13.15□□□□□ -0.3
CNOT9-201ENST00000273064 TMEM221A6NGB7 291 aa13.15□□□□□ -0.3
CNOT9-201ENST00000273064 GGT3PA6NGU5 568 aa13.15□□□□□ -0.3
CNOT9-201ENST00000273064 EIF4E2O60573 245 aaKnown RBP13.15□□□□□ -0.3
CNOT9-201ENST00000273064 CNOT4O95628 575 aaKnown RBP13.15□□□□□ -0.3
CNOT9-201ENST00000273064 CRYZL1O95825 349 aa13.15□□□□□ -0.3
CNOT9-201ENST00000273064 POU3F2P20265 443 aaPredicted RBP13.15□□□□□ -0.3
CNOT9-201ENST00000273064 SGCZQ96LD1 299 aa13.15□□□□□ -0.3
CNOT9-201ENST00000273064 CCDC74BQ96LY2 380 aa13.15□□□□□ -0.3
CNOT9-201ENST00000273064 SORCS2Q96PQ0 1159 aa13.15□□□□□ -0.3
CNOT9-201ENST00000273064 AMELYQ99218 206 aa13.15□□□□□ -0.3
CNOT9-201ENST00000273064 TXNIPQ9H3M7 391 aa13.15□□□□□ -0.3
CNOT9-201ENST00000273064 POFUT1Q9H488 388 aa13.15□□□□□ -0.3
CNOT9-201ENST00000273064 MTCL1Q9Y4B5 1905 aaKnown RBP13.15□□□□□ -0.3
CNOT9-201ENST00000273064 A0A096LPE4 126 aa13.15□□□□□ -0.3
CNOT9-201ENST00000273064 A0A1W2PPZ6 126 aa13.15□□□□□ -0.3
CNOT9-201ENST00000273064 HOXC12P31275 282 aa13.15□□□□□ -0.3
CNOT9-201ENST00000273064 SLC37A1P57057 533 aa13.15□□□□□ -0.3
CNOT9-201ENST00000273064 MFAP5Q13361 173 aa13.15□□□□□ -0.3
CNOT9-201ENST00000273064 MESTQ5EB52 335 aa13.15□□□□□ -0.3
CNOT9-201ENST00000273064 ZNF585AQ6P3V2 769 aa13.15□□□□□ -0.3
CNOT9-201ENST00000273064 PAQR8Q8TEZ7 354 aa13.15□□□□□ -0.3
CNOT9-201ENST00000273064 WDFY2Q96P53 400 aa13.15□□□□□ -0.3
CNOT9-201ENST00000273064 CDC6Q99741 560 aa13.15□□□□□ -0.3
CNOT9-201ENST00000273064 FRRS1LQ9P0K9 344 aa13.15□□□□□ -0.3
CNOT9-201ENST00000273064 TRAPPC4Q9Y296 219 aa13.15□□□□□ -0.3
CNOT9-201ENST00000273064 M0R036 132 aa13.14□□□□□ -0.31
CNOT9-201ENST00000273064 ZNF780AO75290 641 aaPredicted RBP13.14□□□□□ -0.31
CNOT9-201ENST00000273064 RAD51DO75771 328 aa13.14□□□□□ -0.31
CNOT9-201ENST00000273064 NXPH3O95157 252 aa13.14□□□□□ -0.31
CNOT9-201ENST00000273064 ZNF205O95201 554 aa13.14□□□□□ -0.31
CNOT9-201ENST00000273064 SYNGR4O95473 234 aa13.14□□□□□ -0.31
CNOT9-201ENST00000273064 IL11P20809 199 aa13.14□□□□□ -0.31
CNOT9-201ENST00000273064 DMKNQ6E0U4 476 aaPredicted RBP13.14□□□□□ -0.31
CNOT9-201ENST00000273064 BRICD5Q6PL45 260 aa13.14□□□□□ -0.31
CNOT9-201ENST00000273064 AAED1Q7RTV5 226 aa13.14□□□□□ -0.31
CNOT9-201ENST00000273064 CPEB2Q7Z5Q1 589 aaKnown RBP13.14□□□□□ -0.31
CNOT9-201ENST00000273064 ZNF687Q8N1G0 1237 aa13.14□□□□□ -0.31
CNOT9-201ENST00000273064 IFI44Q8TCB0 444 aa13.14□□□□□ -0.31
CNOT9-201ENST00000273064 ALKBH3Q96Q83 286 aaPredicted RBP13.14□□□□□ -0.31
CNOT9-201ENST00000273064 PCDHGA5Q9Y5G8 931 aa13.14□□□□□ -0.31
CNOT9-201ENST00000273064 FER1L5A0AVI2 2057 aa13.14□□□□□ -0.31
CNOT9-201ENST00000273064 H3BMH7 237 aa13.14□□□□□ -0.31
CNOT9-201ENST00000273064 TNFSF14O43557 240 aa13.14□□□□□ -0.31
CNOT9-201ENST00000273064 ANGPTL7O43827 346 aa13.14□□□□□ -0.31
CNOT9-201ENST00000273064 MYBPHQ13203 477 aa13.14□□□□□ -0.31
CNOT9-201ENST00000273064 RIN1Q13671 783 aa13.14□□□□□ -0.31
CNOT9-201ENST00000273064 GTPBP8Q8N3Z3 284 aaPredicted RBP13.14□□□□□ -0.31
CNOT9-201ENST00000273064 MFSD8Q8NHS3 518 aa13.14□□□□□ -0.31
CNOT9-201ENST00000273064 OTOSQ8NHW6 89 aa13.14□□□□□ -0.31
CNOT9-201ENST00000273064 ZNRF4Q8WWF5 429 aa13.14□□□□□ -0.31
CNOT9-201ENST00000273064 C11orf40Q8WZ69 217 aa13.14□□□□□ -0.31
CNOT9-201ENST00000273064 YIPF5Q969M3 257 aa13.14□□□□□ -0.31
CNOT9-201ENST00000273064 JAM3Q9BX67 310 aa13.14□□□□□ -0.31
CNOT9-201ENST00000273064 CHST11Q9NPF2 352 aa13.14□□□□□ -0.31
CNOT9-201ENST00000273064 MLXQ9UH92 298 aa13.14□□□□□ -0.31
CNOT9-201ENST00000273064 PCOLCE2Q9UKZ9 415 aa13.14□□□□□ -0.31
CNOT9-201ENST00000273064 PADI1Q9ULC6 663 aa13.14□□□□□ -0.31
CNOT9-201ENST00000273064 ZNF407Q9C0G0 2248 aa13.14□□□□□ -0.31
CNOT9-201ENST00000273064 GDF9O60383 454 aa13.14□□□□□ -0.31
CNOT9-201ENST00000273064 PRAF2O60831 178 aa13.14□□□□□ -0.31
CNOT9-201ENST00000273064 TP53P04637 393 aaPredicted RBP13.14□□□□□ -0.31
CNOT9-201ENST00000273064 CCL4P13236 92 aa13.14□□□□□ -0.31
CNOT9-201ENST00000273064 SLC16A14Q7RTX9 510 aa13.14□□□□□ -0.31
CNOT9-201ENST00000273064 DND1Q8IYX4 353 aaKnown RBP13.14□□□□□ -0.31
CNOT9-201ENST00000273064 ZNF680Q8NEM1 530 aa13.14□□□□□ -0.31
CNOT9-201ENST00000273064 ZFAND1Q8TCF1 268 aa13.14□□□□□ -0.31
CNOT9-201ENST00000273064 SMIM4Q8WVI0 70 aa13.14□□□□□ -0.31
CNOT9-201ENST00000273064 SDHCQ99643 169 aaPredicted RBP13.14□□□□□ -0.31
CNOT9-201ENST00000273064 STRADBQ9C0K7 418 aa13.14□□□□□ -0.31
CNOT9-201ENST00000273064 MTCH2Q9Y6C9 303 aa13.14□□□□□ -0.31
CNOT9-201ENST00000273064 FRG2CA6NGY1 282 aa13.13□□□□□ -0.31
CNOT9-201ENST00000273064 ARPC3O15145 178 aa13.13□□□□□ -0.31
CNOT9-201ENST00000273064 IGHA1P01876 353 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms