RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 MRPS7Q9Y2R9 242 aaKnown RBP9.93□□□□□ -0.82
MSH3-201ENST00000265081 A0A1B0GTI1 187 aa9.92□□□□□ -0.82
MSH3-201ENST00000265081 LINC00862A6NCI5 91 aa9.92□□□□□ -0.82
MSH3-201ENST00000265081 A6NL46 340 aa9.92□□□□□ -0.82
MSH3-201ENST00000265081 D6RAR5 112 aa9.92□□□□□ -0.82
MSH3-201ENST00000265081 OR2J2O76002 312 aa9.92□□□□□ -0.82
MSH3-201ENST00000265081 ZNF735P0CB33 412 aa9.92□□□□□ -0.82
MSH3-201ENST00000265081 HTR2CP28335 458 aa9.92□□□□□ -0.82
MSH3-201ENST00000265081 HSD11B1P28845 292 aa9.92□□□□□ -0.82
MSH3-201ENST00000265081 ZNF41P51814 821 aaPredicted RBP9.92□□□□□ -0.82
MSH3-201ENST00000265081 RBMS2Q15434 407 aaKnown RBP9.92□□□□□ -0.82
MSH3-201ENST00000265081 GLT8D1Q68CQ7 371 aa9.92□□□□□ -0.82
MSH3-201ENST00000265081 OR7E24Q6IFN5 339 aa9.92□□□□□ -0.82
MSH3-201ENST00000265081 TEX261Q6UWH6 196 aa9.92□□□□□ -0.82
MSH3-201ENST00000265081 OR4C16Q8NGL9 310 aa9.92□□□□□ -0.82
MSH3-201ENST00000265081 TSEN15Q8WW01 171 aaKnown RBP9.92□□□□□ -0.82
MSH3-201ENST00000265081 C11orf40Q8WZ69 217 aa9.92□□□□□ -0.82
MSH3-201ENST00000265081 CDX2Q99626 313 aaPredicted RBP9.92□□□□□ -0.82
MSH3-201ENST00000265081 UQCC2Q9BRT2 126 aa9.92□□□□□ -0.82
MSH3-201ENST00000265081 B3GNT2Q9NY97 397 aa9.92□□□□□ -0.82
MSH3-201ENST00000265081 FLVCR1Q9Y5Y0 555 aa9.92□□□□□ -0.82
MSH3-201ENST00000265081 U3KQ87 197 aa9.92□□□□□ -0.82
MSH3-201ENST00000265081 LOC101059948A0A1B0GTJ6 334 aa9.92□□□□□ -0.82
MSH3-201ENST00000265081 MEN1O00255 615 aa9.92□□□□□ -0.82
MSH3-201ENST00000265081 C10orf128Q5T292 105 aa9.92□□□□□ -0.82
MSH3-201ENST00000265081 MTFR2Q6P444 385 aa9.92□□□□□ -0.82
MSH3-201ENST00000265081 GTPBP8Q8N3Z3 284 aaPredicted RBP9.92□□□□□ -0.82
MSH3-201ENST00000265081 TMEM54Q969K7 222 aa9.92□□□□□ -0.82
MSH3-201ENST00000265081 SEH1LQ96EE3 360 aa9.92□□□□□ -0.82
MSH3-201ENST00000265081 GAREM1Q9H706 876 aa9.92□□□□□ -0.82
MSH3-201ENST00000265081 FBXL2Q9UKC9 423 aa9.92□□□□□ -0.82
MSH3-201ENST00000265081 VSIG10L2P0DP72 767 aa9.92□□□□□ -0.82
MSH3-201ENST00000265081 RAD52P43351 418 aa9.92□□□□□ -0.82
MSH3-201ENST00000265081 POU3F1Q03052 451 aaPredicted RBP9.92□□□□□ -0.82
MSH3-201ENST00000265081 MPPED2Q15777 294 aa9.92□□□□□ -0.82
MSH3-201ENST00000265081 DBX2Q6ZNG2 339 aa9.92□□□□□ -0.82
MSH3-201ENST00000265081 IFI44Q8TCB0 444 aa9.92□□□□□ -0.82
MSH3-201ENST00000265081 SLC25A44Q96H78 314 aaPredicted RBP9.92□□□□□ -0.82
MSH3-201ENST00000265081 GUCD1Q96NT3 240 aa9.92□□□□□ -0.82
MSH3-201ENST00000265081 OXGR1Q96P68 337 aa9.92□□□□□ -0.82
MSH3-201ENST00000265081 METTL17Q9H7H0 456 aaPredicted RBP9.92□□□□□ -0.82
MSH3-201ENST00000265081 MGAT4CQ9UBM8 478 aa9.92□□□□□ -0.82
MSH3-201ENST00000265081 CDV3Q9UKY7 258 aaKnown RBP9.92□□□□□ -0.82
MSH3-201ENST00000265081 MGAT4AQ9UM21 535 aa9.92□□□□□ -0.82
MSH3-201ENST00000265081 EMC9Q9Y3B6 208 aa9.92□□□□□ -0.82
MSH3-201ENST00000265081 PLSCR5A0PG75 271 aa9.92□□□□□ -0.82
MSH3-201ENST00000265081 ZNF814B7Z6K7 855 aa9.92□□□□□ -0.82
MSH3-201ENST00000265081 LPLP06858 475 aa9.92□□□□□ -0.82
MSH3-201ENST00000265081 ACSM4P0C7M7 580 aa9.92□□□□□ -0.82
MSH3-201ENST00000265081 PTHLHP12272 177 aa9.92□□□□□ -0.82
MSH3-201ENST00000265081 ZNF17P17021 662 aa9.92□□□□□ -0.82
MSH3-201ENST00000265081 RNASE12Q5GAN4 147 aaKnown RBP9.92□□□□□ -0.82
MSH3-201ENST00000265081 PAQR4Q8N4S7 273 aaPredicted RBP9.92□□□□□ -0.82
MSH3-201ENST00000265081 CRB3Q9BUF7 120 aa9.92□□□□□ -0.82
MSH3-201ENST00000265081 DIABLOQ9NR28 239 aa9.92□□□□□ -0.82
MSH3-201ENST00000265081 C2orf72A6NCS6 295 aa9.91□□□□□ -0.82
MSH3-201ENST00000265081 HLA-DQA2P01906 255 aa9.91□□□□□ -0.82
MSH3-201ENST00000265081 PPM1FP49593 454 aaPredicted RBP9.91□□□□□ -0.82
MSH3-201ENST00000265081 SFRP4Q6FHJ7 346 aaPredicted RBP9.91□□□□□ -0.82
MSH3-201ENST00000265081 ZNF431Q8TF32 576 aaPredicted RBP9.91□□□□□ -0.82
MSH3-201ENST00000265081 SLAMF6Q96DU3 332 aa9.91□□□□□ -0.82
MSH3-201ENST00000265081 FOXN4Q96NZ1 517 aa9.91□□□□□ -0.82
MSH3-201ENST00000265081 MED29Q9NX70 200 aa9.91□□□□□ -0.82
MSH3-201ENST00000265081 CCDC85CA6NKD9 419 aa9.91□□□□□ -0.82
MSH3-201ENST00000265081 ARPC1BO15143 372 aaKnown RBP9.91□□□□□ -0.82
MSH3-201ENST00000265081 RBBP9O75884 186 aa9.91□□□□□ -0.82
MSH3-201ENST00000265081 ZNF28P17035 718 aa9.91□□□□□ -0.82
MSH3-201ENST00000265081 CLDN6P56747 220 aa9.91□□□□□ -0.82
MSH3-201ENST00000265081 EXT1Q16394 746 aa9.91□□□□□ -0.82
MSH3-201ENST00000265081 OR5M10Q6IEU7 315 aa9.91□□□□□ -0.82
MSH3-201ENST00000265081 PLPP7Q8NBV4 271 aa9.91□□□□□ -0.82
MSH3-201ENST00000265081 PAQR8Q8TEZ7 354 aa9.91□□□□□ -0.82
MSH3-201ENST00000265081 SPEGQ15772 3267 aa9.91□□□□□ -0.82
MSH3-201ENST00000265081 RGS11O94810 467 aa9.91□□□□□ -0.82
MSH3-201ENST00000265081 CD2P06729 351 aa9.91□□□□□ -0.82
MSH3-201ENST00000265081 AKAIN1P0CW23 69 aa9.91□□□□□ -0.82
MSH3-201ENST00000265081 FAUP35544 74 aaKnown RBP9.91□□□□□ -0.82
MSH3-201ENST00000265081 BIDP55957 195 aa9.91□□□□□ -0.82
MSH3-201ENST00000265081 PSMA6P60900 246 aaKnown RBP9.91□□□□□ -0.82
MSH3-201ENST00000265081 SLC25A25Q6KCM7 469 aa9.91□□□□□ -0.82
MSH3-201ENST00000265081 CRIP3Q6Q6R5 217 aa9.91□□□□□ -0.82
MSH3-201ENST00000265081 OR51A2Q8NGJ7 313 aa9.91□□□□□ -0.82
MSH3-201ENST00000265081 CMKLR1Q99788 373 aa9.91□□□□□ -0.82
MSH3-201ENST00000265081 CKLFQ9UBR5 152 aa9.91□□□□□ -0.82
MSH3-201ENST00000265081 HSPB11Q9Y547 144 aa9.91□□□□□ -0.82
MSH3-201ENST00000265081 CPED1A4D0V7 1026 aa9.9□□□□□ -0.82
MSH3-201ENST00000265081 KDM4BO94953 1096 aa9.9□□□□□ -0.82
MSH3-201ENST00000265081 BPNT1O95861 308 aa9.9□□□□□ -0.82
MSH3-201ENST00000265081 ZNF823P16415 610 aa9.9□□□□□ -0.82
MSH3-201ENST00000265081 CHAF1BQ13112 559 aa9.9□□□□□ -0.82
MSH3-201ENST00000265081 CFAP77Q6ZQR2 320 aa9.9□□□□□ -0.82
MSH3-201ENST00000265081 KDM8Q8N371 416 aa9.9□□□□□ -0.82
MSH3-201ENST00000265081 OR4D10Q8NGI6 311 aa9.9□□□□□ -0.82
MSH3-201ENST00000265081 OR13C3Q8NGS6 347 aa9.9□□□□□ -0.82
MSH3-201ENST00000265081 EDAQ92838 391 aa9.9□□□□□ -0.82
MSH3-201ENST00000265081 C1orf147Q96MC9 270 aaPredicted RBP9.9□□□□□ -0.82
MSH3-201ENST00000265081 KCNK15Q9H427 330 aa9.9□□□□□ -0.82
MSH3-201ENST00000265081 AKIRIN1Q9H9L7 192 aaPredicted RBP9.9□□□□□ -0.82
MSH3-201ENST00000265081 CA10Q9NS85 328 aa9.9□□□□□ -0.82
MSH3-201ENST00000265081 KLRF1Q9NZS2 232 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms