RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 EVX1P49640 407 aa12.68□□□□□ -0.38
CDH3-201ENST00000264012 PRICKLE4Q2TBC4 344 aa12.68□□□□□ -0.38
CDH3-201ENST00000264012 ZNF529Q6P280 563 aa12.68□□□□□ -0.38
CDH3-201ENST00000264012 OR2G2Q8NGZ5 317 aa12.68□□□□□ -0.38
CDH3-201ENST00000264012 RBM38Q9H0Z9 239 aaKnown RBP12.68□□□□□ -0.38
CDH3-201ENST00000264012 B3GAT1Q9P2W7 334 aa12.68□□□□□ -0.38
CDH3-201ENST00000264012 EDARQ9UNE0 448 aa12.68□□□□□ -0.38
CDH3-201ENST00000264012 ZNF831Q5JPB2 1677 aa12.68□□□□□ -0.38
CDH3-201ENST00000264012 A0A087WZY1 265 aa12.68□□□□□ -0.38
CDH3-201ENST00000264012 ANKUB1A6NFN9 424 aa12.68□□□□□ -0.38
CDH3-201ENST00000264012 WNT11O96014 354 aa12.68□□□□□ -0.38
CDH3-201ENST00000264012 NXPH1P58417 271 aa12.68□□□□□ -0.38
CDH3-201ENST00000264012 OGFOD3Q6PK18 319 aa12.68□□□□□ -0.38
CDH3-201ENST00000264012 GDPD3Q7L5L3 318 aa12.68□□□□□ -0.38
CDH3-201ENST00000264012 KCNE4Q8WWG9 221 aa12.68□□□□□ -0.38
CDH3-201ENST00000264012 ZCCHC4Q9H5U6 513 aa12.68□□□□□ -0.38
CDH3-201ENST00000264012 SCPEP1Q9HB40 452 aa12.68□□□□□ -0.38
CDH3-201ENST00000264012 BOLA1Q9Y3E2 137 aa12.68□□□□□ -0.38
CDH3-201ENST00000264012 R4GMQ9 66 aa12.68□□□□□ -0.38
CDH3-201ENST00000264012 IGHV3-15A0A0B4J1V0 119 aa12.68□□□□□ -0.38
CDH3-201ENST00000264012 A0A1W2PS29 197 aa12.68□□□□□ -0.38
CDH3-201ENST00000264012 OTOL1A6NHN0 477 aaPredicted RBP12.68□□□□□ -0.38
CDH3-201ENST00000264012 KRBOX1C9JBD0 128 aa12.68□□□□□ -0.38
CDH3-201ENST00000264012 CBR3O75828 277 aa12.68□□□□□ -0.38
CDH3-201ENST00000264012 RFC3P40938 356 aa12.68□□□□□ -0.38
CDH3-201ENST00000264012 CLDN15P56746 228 aa12.68□□□□□ -0.38
CDH3-201ENST00000264012 ZIC1Q15915 447 aa12.68□□□□□ -0.38
CDH3-201ENST00000264012 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.68□□□□□ -0.38
CDH3-201ENST00000264012 PRSS35Q8N3Z0 413 aa12.68□□□□□ -0.38
CDH3-201ENST00000264012 SPACA5Q96QH8 159 aa12.68□□□□□ -0.38
CDH3-201ENST00000264012 ATF6BQ99941 703 aa12.68□□□□□ -0.38
CDH3-201ENST00000264012 SLCO1C1Q9NYB5 712 aa12.68□□□□□ -0.38
CDH3-201ENST00000264012 C21orf58P58505 322 aa12.67□□□□□ -0.38
CDH3-201ENST00000264012 PPIAP62937 165 aaKnown RBP12.67□□□□□ -0.38
CDH3-201ENST00000264012 FOCADQ5VW36 1801 aa12.67□□□□□ -0.38
CDH3-201ENST00000264012 SPRED2Q7Z698 418 aa12.67□□□□□ -0.38
CDH3-201ENST00000264012 SDSLQ96GA7 329 aa12.67□□□□□ -0.38
CDH3-201ENST00000264012 ZPBPQ9BS86 351 aa12.67□□□□□ -0.38
CDH3-201ENST00000264012 HRH4Q9H3N8 390 aa12.67□□□□□ -0.38
CDH3-201ENST00000264012 FAM60AQ9NP50 221 aa12.67□□□□□ -0.38
CDH3-201ENST00000264012 SIRT3Q9NTG7 399 aaPredicted RBP12.67□□□□□ -0.38
CDH3-201ENST00000264012 A0A0B4J203 849 aa12.67□□□□□ -0.38
CDH3-201ENST00000264012 SRPXP78539 464 aa12.67□□□□□ -0.38
CDH3-201ENST00000264012 OR10K1Q8NGX5 313 aa12.67□□□□□ -0.38
CDH3-201ENST00000264012 SP7Q8TDD2 431 aaPredicted RBP12.67□□□□□ -0.38
CDH3-201ENST00000264012 SLAMF9Q96A28 289 aa12.67□□□□□ -0.38
CDH3-201ENST00000264012 LRRC3BQ96PB8 259 aa12.67□□□□□ -0.38
CDH3-201ENST00000264012 JAM3Q9BX67 310 aa12.67□□□□□ -0.38
CDH3-201ENST00000264012 C20orf141Q9NUB4 165 aa12.67□□□□□ -0.38
CDH3-201ENST00000264012 SMLR1H3BR10 107 aa12.67□□□□□ -0.38
CDH3-201ENST00000264012 HRO43593 1189 aa12.67□□□□□ -0.38
CDH3-201ENST00000264012 HMGA2P52926 109 aa12.67□□□□□ -0.38
CDH3-201ENST00000264012 PCBP3P57721 371 aaKnown RBP12.67□□□□□ -0.38
CDH3-201ENST00000264012 PLA2G7Q13093 441 aa12.67□□□□□ -0.38
CDH3-201ENST00000264012 IL10RAQ13651 578 aa12.67□□□□□ -0.38
CDH3-201ENST00000264012 CD276Q5ZPR3 534 aa12.67□□□□□ -0.38
CDH3-201ENST00000264012 STAC2Q6ZMT1 411 aa12.67□□□□□ -0.38
CDH3-201ENST00000264012 MDGA2Q7Z553 956 aa12.67□□□□□ -0.38
CDH3-201ENST00000264012 C3orf49Q96BT1 292 aa12.67□□□□□ -0.38
CDH3-201ENST00000264012 MMP25Q9NPA2 562 aa12.67□□□□□ -0.38
CDH3-201ENST00000264012 PRMT8Q9NR22 394 aaPredicted RBP12.67□□□□□ -0.38
CDH3-201ENST00000264012 QPCTLQ9NXS2 382 aa12.67□□□□□ -0.38
CDH3-201ENST00000264012 KIF25Q9UIL4 384 aa12.67□□□□□ -0.38
CDH3-201ENST00000264012 A0A0B4J2A0 478 aa12.67□□□□□ -0.38
CDH3-201ENST00000264012 TMEM235A6NFC5 223 aa12.67□□□□□ -0.38
CDH3-201ENST00000264012 MSTNO14793 375 aa12.67□□□□□ -0.38
CDH3-201ENST00000264012 FADS1O60427 444 aa12.67□□□□□ -0.38
CDH3-201ENST00000264012 GRPP07492 148 aa12.67□□□□□ -0.38
CDH3-201ENST00000264012 ANXA7P20073 488 aaKnown RBP12.67□□□□□ -0.38
CDH3-201ENST00000264012 OMGP23515 440 aa12.67□□□□□ -0.38
CDH3-201ENST00000264012 KIR2DL1P43626 348 aaPredicted RBP12.67□□□□□ -0.38
CDH3-201ENST00000264012 CLN3Q13286 438 aa12.67□□□□□ -0.38
CDH3-201ENST00000264012 CTF1Q16619 201 aa12.67□□□□□ -0.38
CDH3-201ENST00000264012 IAH1Q2TAA2 248 aaPredicted RBP12.67□□□□□ -0.38
CDH3-201ENST00000264012 FAM27D1Q5T7N8 215 aa12.67□□□□□ -0.38
CDH3-201ENST00000264012 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.67□□□□□ -0.38
CDH3-201ENST00000264012 LUZP4Q9P127 313 aa12.67□□□□□ -0.38
CDH3-201ENST00000264012 SHPKQ9UHJ6 478 aa12.67□□□□□ -0.38
CDH3-201ENST00000264012 DHHO43323 396 aa12.66□□□□□ -0.38
CDH3-201ENST00000264012 GLSO94925 669 aaPredicted RBP12.66□□□□□ -0.38
CDH3-201ENST00000264012 SIX6O95475 246 aa12.66□□□□□ -0.38
CDH3-201ENST00000264012 CDK5Q00535 292 aa12.66□□□□□ -0.38
CDH3-201ENST00000264012 FAM122CQ6P4D5 195 aa12.66□□□□□ -0.38
CDH3-201ENST00000264012 CMTM4Q8IZR5 234 aa12.66□□□□□ -0.38
CDH3-201ENST00000264012 OR51A2Q8NGJ7 313 aa12.66□□□□□ -0.38
CDH3-201ENST00000264012 ORAI1Q96D31 301 aa12.66□□□□□ -0.38
CDH3-201ENST00000264012 NECAP2Q9NVZ3 263 aa12.66□□□□□ -0.38
CDH3-201ENST00000264012 FBXO34Q9NWN3 711 aa12.66□□□□□ -0.38
CDH3-201ENST00000264012 CCL27Q9Y4X3 112 aa12.66□□□□□ -0.38
CDH3-201ENST00000264012 OR6C65A6NJZ3 312 aa12.66□□□□□ -0.38
CDH3-201ENST00000264012 PHF1O43189 567 aaPredicted RBP12.66□□□□□ -0.38
CDH3-201ENST00000264012 PDGFAP04085 211 aa12.66□□□□□ -0.38
CDH3-201ENST00000264012 RAB6AP20340 208 aa12.66□□□□□ -0.38
CDH3-201ENST00000264012 CD79BP40259 229 aa12.66□□□□□ -0.38
CDH3-201ENST00000264012 ZNF136P52737 540 aa12.66□□□□□ -0.38
CDH3-201ENST00000264012 ZNF117Q03924 483 aa12.66□□□□□ -0.38
CDH3-201ENST00000264012 PAN3Q58A45 887 aaKnown RBP12.66□□□□□ -0.38
CDH3-201ENST00000264012 ABI3BPQ7Z7G0 1075 aa12.66□□□□□ -0.38
CDH3-201ENST00000264012 BATF2Q8N1L9 274 aa12.66□□□□□ -0.38
CDH3-201ENST00000264012 EMG1Q92979 244 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms