RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 LMO4P61968 165 aa13.67□□□□□ -0.22
USE1-201ENST00000263897 TSPAN31Q12999 210 aa13.67□□□□□ -0.22
USE1-201ENST00000263897 PSG7Q13046 419 aa13.67□□□□□ -0.22
USE1-201ENST00000263897 CCDC92Q53HC0 331 aaPredicted RBP13.67□□□□□ -0.22
USE1-201ENST00000263897 DNM1P34Q6PK57 102 aa13.67□□□□□ -0.22
USE1-201ENST00000263897 OR6V1Q8N148 313 aa13.67□□□□□ -0.22
USE1-201ENST00000263897 OR1F12Q8NHA8 337 aa13.67□□□□□ -0.22
USE1-201ENST00000263897 SPATA3Q8NHX4 192 aa13.67□□□□□ -0.22
USE1-201ENST00000263897 SLC7A6Q92536 515 aa13.67□□□□□ -0.22
USE1-201ENST00000263897 NMNAT3Q96T66 252 aa13.67□□□□□ -0.22
USE1-201ENST00000263897 IFT27Q9BW83 186 aa13.67□□□□□ -0.22
USE1-201ENST00000263897 NARFLQ9H6Q4 476 aa13.67□□□□□ -0.22
USE1-201ENST00000263897 SAP30LQ9HAJ7 183 aa13.67□□□□□ -0.22
USE1-201ENST00000263897 CGGBP1Q9UFW8 167 aaPredicted RBP13.67□□□□□ -0.22
USE1-201ENST00000263897 ZDHHC8Q9ULC8 765 aa13.67□□□□□ -0.22
USE1-201ENST00000263897 STARD10Q9Y365 291 aa13.67□□□□□ -0.22
USE1-201ENST00000263897 IGLV1-36A0A0B4J1U3 117 aa13.66□□□□□ -0.22
USE1-201ENST00000263897 RER1O15258 196 aa13.66□□□□□ -0.22
USE1-201ENST00000263897 GPANK1O95872 356 aa13.66□□□□□ -0.22
USE1-201ENST00000263897 RENP00797 406 aa13.66□□□□□ -0.22
USE1-201ENST00000263897 T-ENOLP0DO92 83 aa13.66□□□□□ -0.22
USE1-201ENST00000263897 HIST1H1CP16403 213 aaKnown RBP13.66□□□□□ -0.22
USE1-201ENST00000263897 GSTM3P21266 225 aa13.66□□□□□ -0.22
USE1-201ENST00000263897 ATP6V1B2P21281 511 aa13.66□□□□□ -0.22
USE1-201ENST00000263897 HIST1H3AP68431 136 aa13.66□□□□□ -0.22
USE1-201ENST00000263897 TRIM25Q14258 630 aaKnown RBP13.66□□□□□ -0.22
USE1-201ENST00000263897 HFEQ30201 348 aa13.66□□□□□ -0.22
USE1-201ENST00000263897 MTX3Q5HYI7 312 aa13.66□□□□□ -0.22
USE1-201ENST00000263897 HIST2H3PS2Q5TEC6 136 aa13.66□□□□□ -0.22
USE1-201ENST00000263897 PGBD2Q6P3X8 592 aa13.66□□□□□ -0.22
USE1-201ENST00000263897 LEG1Q6P5S2 330 aa13.66□□□□□ -0.22
USE1-201ENST00000263897 PGM2L1Q6PCE3 622 aa13.66□□□□□ -0.22
USE1-201ENST00000263897 HIST2H3AQ71DI3 136 aa13.66□□□□□ -0.22
USE1-201ENST00000263897 JAZF1Q86VZ6 243 aa13.66□□□□□ -0.22
USE1-201ENST00000263897 LINC00471Q8N535 108 aa13.66□□□□□ -0.22
USE1-201ENST00000263897 NPEPL1Q8NDH3 523 aa13.66□□□□□ -0.22
USE1-201ENST00000263897 GJC3Q8NFK1 279 aa13.66□□□□□ -0.22
USE1-201ENST00000263897 OR4K13Q8NH42 304 aa13.66□□□□□ -0.22
USE1-201ENST00000263897 ELMOD3Q96FG2 381 aa13.66□□□□□ -0.22
USE1-201ENST00000263897 DIRC2Q96SL1 478 aa13.66□□□□□ -0.22
USE1-201ENST00000263897 TRIM15Q9C019 465 aa13.66□□□□□ -0.22
USE1-201ENST00000263897 EGLN1Q9GZT9 426 aa13.66□□□□□ -0.22
USE1-201ENST00000263897 LYVE1Q9Y5Y7 322 aa13.66□□□□□ -0.22
USE1-201ENST00000263897 CACNG2Q9Y698 323 aa13.66□□□□□ -0.22
USE1-201ENST00000263897 TCRBV5S2A0A599 114 aa13.65□□□□□ -0.22
USE1-201ENST00000263897 RNF212BA8MTL3 300 aa13.65□□□□□ -0.22
USE1-201ENST00000263897 FAM157AC9JC47 383 aa13.65□□□□□ -0.22
USE1-201ENST00000263897 TNFRSF11BO00300 401 aa13.65□□□□□ -0.22
USE1-201ENST00000263897 GAAP10253 952 aa13.65□□□□□ -0.22
USE1-201ENST00000263897 NOS3P29474 1203 aa13.65□□□□□ -0.22
USE1-201ENST00000263897 MAGEA2P43356 314 aa13.65□□□□□ -0.22
USE1-201ENST00000263897 MS4A2Q01362 244 aa13.65□□□□□ -0.22
USE1-201ENST00000263897 MVKQ03426 396 aa13.65□□□□□ -0.22
USE1-201ENST00000263897 CDK5R2Q13319 367 aa13.65□□□□□ -0.22
USE1-201ENST00000263897 MEP1BQ16820 701 aa13.65□□□□□ -0.22
USE1-201ENST00000263897 ZMAT1Q5H9K5 638 aa13.65□□□□□ -0.22
USE1-201ENST00000263897 ZNF620Q6ZNG0 422 aa13.65□□□□□ -0.22
USE1-201ENST00000263897 RINLQ6ZS11 566 aa13.65□□□□□ -0.22
USE1-201ENST00000263897 ZBTB46Q86UZ6 589 aa13.65□□□□□ -0.22
USE1-201ENST00000263897 DHFR2Q86XF0 187 aa13.65□□□□□ -0.22
USE1-201ENST00000263897 CCDC197Q8NCU1 140 aa13.65□□□□□ -0.22
USE1-201ENST00000263897 PTP4A1Q93096 173 aa13.65□□□□□ -0.22
USE1-201ENST00000263897 HAVCR1Q96D42 359 aa13.65□□□□□ -0.22
USE1-201ENST00000263897 CMBLQ96DG6 245 aa13.65□□□□□ -0.22
USE1-201ENST00000263897 COG8Q96MW5 612 aa13.65□□□□□ -0.22
USE1-201ENST00000263897 DCLRE1CQ96SD1 692 aaKnown RBP13.65□□□□□ -0.22
USE1-201ENST00000263897 MUC13Q9H3R2 512 aa13.65□□□□□ -0.22
USE1-201ENST00000263897 POFUT1Q9H488 388 aa13.65□□□□□ -0.22
USE1-201ENST00000263897 MSL2Q9HCI7 577 aa13.65□□□□□ -0.22
USE1-201ENST00000263897 ATPIF1Q9UII2 106 aa13.65□□□□□ -0.22
USE1-201ENST00000263897 PURGQ9UJV8 347 aaKnown RBP13.65□□□□□ -0.22
USE1-201ENST00000263897 LHFPL6Q9Y693 200 aa13.65□□□□□ -0.22
USE1-201ENST00000263897 WNK2Q9Y3S1 2297 aa13.65□□□□□ -0.22
USE1-201ENST00000263897 OR6C68A6NDL8 312 aa13.64□□□□□ -0.23
USE1-201ENST00000263897 CLDN25C9JDP6 229 aa13.64□□□□□ -0.23
USE1-201ENST00000263897 DYNC1I1O14576 645 aa13.64□□□□□ -0.23
USE1-201ENST00000263897 PHF1O43189 567 aaPredicted RBP13.64□□□□□ -0.23
USE1-201ENST00000263897 TIMM8AO60220 97 aaPredicted RBP13.64□□□□□ -0.23
USE1-201ENST00000263897 UBOX5O94941 541 aa13.64□□□□□ -0.23
USE1-201ENST00000263897 GASTP01350 101 aa13.64□□□□□ -0.23
USE1-201ENST00000263897 CD55P08174 381 aa13.64□□□□□ -0.23
USE1-201ENST00000263897 DBHP09172 617 aa13.64□□□□□ -0.23
USE1-201ENST00000263897 KITLGP21583 273 aa13.64□□□□□ -0.23
USE1-201ENST00000263897 PCMT1P22061 227 aa13.64□□□□□ -0.23
USE1-201ENST00000263897 CALB2P22676 271 aa13.64□□□□□ -0.23
USE1-201ENST00000263897 DBPQ10586 325 aaPredicted RBP13.64□□□□□ -0.23
USE1-201ENST00000263897 COX10Q12887 443 aa13.64□□□□□ -0.23
USE1-201ENST00000263897 SLC35F1Q5T1Q4 408 aa13.64□□□□□ -0.23
USE1-201ENST00000263897 AVPI1Q5T686 147 aa13.64□□□□□ -0.23
USE1-201ENST00000263897 LCN8Q6JVE9 175 aa13.64□□□□□ -0.23
USE1-201ENST00000263897 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.64□□□□□ -0.23
USE1-201ENST00000263897 GLCCI1Q86VQ1 547 aa13.64□□□□□ -0.23
USE1-201ENST00000263897 SLC26A10Q8NG04 563 aa13.64□□□□□ -0.23
USE1-201ENST00000263897 OR4C15Q8NGM1 316 aa13.64□□□□□ -0.23
USE1-201ENST00000263897 TMEM158Q8WZ71 300 aa13.64□□□□□ -0.23
USE1-201ENST00000263897 CCL17Q92583 94 aa13.64□□□□□ -0.23
USE1-201ENST00000263897 RAB1CQ92928 201 aa13.64□□□□□ -0.23
USE1-201ENST00000263897 BTBD10Q9BSF8 475 aa13.64□□□□□ -0.23
USE1-201ENST00000263897 MAGIXQ9H6Y5 334 aa13.64□□□□□ -0.23
USE1-201ENST00000263897 EGLN3Q9H6Z9 239 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms