RNA–Protein interactions for RNA: ENST00000262803.9

UPF1-201, Transcript of UPF1, RNA helicase and ATPase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF1, Length 5,348 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-201ENST00000262803 FZD2Q14332 565 aa17.45■□□□□ 0.38
UPF1-201ENST00000262803 IAH1Q2TAA2 248 aaPredicted RBP17.45■□□□□ 0.38
UPF1-201ENST00000262803 ARIH2OSQ8N7S6 290 aa17.45■□□□□ 0.38
UPF1-201ENST00000262803 PLPP7Q8NBV4 271 aa17.45■□□□□ 0.38
UPF1-201ENST00000262803 OPALINQ96PE5 141 aa17.45■□□□□ 0.38
UPF1-201ENST00000262803 CMC2Q9NRP2 79 aa17.45■□□□□ 0.38
UPF1-201ENST00000262803 EXO1Q9UQ84 846 aaKnown RBP17.45■□□□□ 0.38
UPF1-201ENST00000262803 GRPP07492 148 aa17.44■□□□□ 0.38
UPF1-201ENST00000262803 NPBWR1P48145 328 aa17.44■□□□□ 0.38
UPF1-201ENST00000262803 ZNF620Q6ZNG0 422 aa17.44■□□□□ 0.38
UPF1-201ENST00000262803 TMEM179BQ7Z7N9 219 aa17.44■□□□□ 0.38
UPF1-201ENST00000262803 ANGPTL5Q86XS5 388 aa17.44■□□□□ 0.38
UPF1-201ENST00000262803 CADM4Q8NFZ8 388 aa17.44■□□□□ 0.38
UPF1-201ENST00000262803 NRSN2Q9GZP1 204 aa17.44■□□□□ 0.38
UPF1-201ENST00000262803 LAMB1P07942 1786 aa17.44■□□□□ 0.38
UPF1-201ENST00000262803 M0QYG6 137 aa17.44■□□□□ 0.38
UPF1-201ENST00000262803 IMPA2O14732 288 aa17.44■□□□□ 0.38
UPF1-201ENST00000262803 DUSP1P28562 367 aa17.44■□□□□ 0.38
UPF1-201ENST00000262803 LINC01599Q8WXQ3 324 aa17.44■□□□□ 0.38
UPF1-201ENST00000262803 EDEM2Q9BV94 578 aa17.44■□□□□ 0.38
UPF1-201ENST00000262803 DLL4Q9NR61 685 aa17.44■□□□□ 0.38
UPF1-201ENST00000262803 FBXO8Q9NRD0 319 aa17.44■□□□□ 0.38
UPF1-201ENST00000262803 FOLR1P15328 257 aa17.44■□□□□ 0.38
UPF1-201ENST00000262803 DDOSTP39656 456 aa17.44■□□□□ 0.38
UPF1-201ENST00000262803 TMEM41BQ5BJD5 291 aa17.44■□□□□ 0.38
UPF1-201ENST00000262803 PRSS45Q7RTY3 260 aa17.44■□□□□ 0.38
UPF1-201ENST00000262803 LANCL2Q9NS86 450 aa17.44■□□□□ 0.38
UPF1-201ENST00000262803 MYO5AQ9Y4I1 1855 aaKnown RBP17.44■□□□□ 0.38
UPF1-201ENST00000262803 MYO7AQ13402 2215 aa17.44■□□□□ 0.38
UPF1-201ENST00000262803 CBR3O75828 277 aa17.44■□□□□ 0.38
UPF1-201ENST00000262803 ADGRG3Q86Y34 549 aa17.44■□□□□ 0.38
UPF1-201ENST00000262803 CMTM4Q8IZR5 234 aa17.44■□□□□ 0.38
UPF1-201ENST00000262803 TMEM99Q8N816 258 aa17.44■□□□□ 0.38
UPF1-201ENST00000262803 SEC22CQ9BRL7 303 aa17.44■□□□□ 0.38
UPF1-201ENST00000262803 NRAPQ86VF7 1730 aa17.44■□□□□ 0.38
UPF1-201ENST00000262803 CRYM-AS1A6NIL9 109 aa17.43■□□□□ 0.38
UPF1-201ENST00000262803 SLC2A1P11166 492 aa17.43■□□□□ 0.38
UPF1-201ENST00000262803 PRKACAP17612 351 aa17.43■□□□□ 0.38
UPF1-201ENST00000262803 TCTN3Q6NUS6 607 aa17.43■□□□□ 0.38
UPF1-201ENST00000262803 OR51A4Q8NGJ6 313 aa17.43■□□□□ 0.38
UPF1-201ENST00000262803 OR10K1Q8NGX5 313 aa17.43■□□□□ 0.38
UPF1-201ENST00000262803 DYNC2LI1Q8TCX1 351 aa17.43■□□□□ 0.38
UPF1-201ENST00000262803 SLAMF6Q96DU3 332 aa17.43■□□□□ 0.38
UPF1-201ENST00000262803 CIB3Q96Q77 187 aaPredicted RBP17.43■□□□□ 0.38
UPF1-201ENST00000262803 LIN7CQ9NUP9 197 aaKnown RBP17.43■□□□□ 0.38
UPF1-201ENST00000262803 TSPAN12O95859 305 aa17.43■□□□□ 0.38
UPF1-201ENST00000262803 ABCD3P28288 659 aa17.43■□□□□ 0.38
UPF1-201ENST00000262803 MRPL19P49406 292 aaKnown RBP17.43■□□□□ 0.38
UPF1-201ENST00000262803 DOC2BQ14184 412 aa17.43■□□□□ 0.38
UPF1-201ENST00000262803 PTOV1Q86YD1 416 aa17.43■□□□□ 0.38
UPF1-201ENST00000262803 NDUFB11Q9NX14 153 aa17.43■□□□□ 0.38
UPF1-201ENST00000262803 NTNG1Q9Y2I2 539 aa17.43■□□□□ 0.38
UPF1-201ENST00000262803 ZC3H12DA2A288 527 aaKnown RBP17.43■□□□□ 0.38
UPF1-201ENST00000262803 QDPRP09417 244 aa17.43■□□□□ 0.38
UPF1-201ENST00000262803 ZNF85Q03923 595 aa17.43■□□□□ 0.38
UPF1-201ENST00000262803 HIST2H3PS2Q5TEC6 136 aa17.43■□□□□ 0.38
UPF1-201ENST00000262803 ASB13Q8WXK3 278 aa17.43■□□□□ 0.38
UPF1-201ENST00000262803 SLC25A19Q9HC21 320 aa17.43■□□□□ 0.38
UPF1-201ENST00000262803 SLCO1B1Q9Y6L6 691 aa17.43■□□□□ 0.38
UPF1-201ENST00000262803 CD1EP15812 388 aa17.43■□□□□ 0.38
UPF1-201ENST00000262803 PRAMEF5Q5TYX0 476 aa17.43■□□□□ 0.38
UPF1-201ENST00000262803 PRAMEF6Q5VXH4 476 aa17.43■□□□□ 0.38
UPF1-201ENST00000262803 USP51Q70EK9 711 aa17.43■□□□□ 0.38
UPF1-201ENST00000262803 FAM213BQ8TBF2 198 aa17.43■□□□□ 0.38
UPF1-201ENST00000262803 BSCL2Q96G97 398 aaPredicted RBP17.43■□□□□ 0.38
UPF1-201ENST00000262803 TRIB1Q96RU8 372 aa17.43■□□□□ 0.38
UPF1-201ENST00000262803 HRH3Q9Y5N1 445 aa17.43■□□□□ 0.38
UPF1-201ENST00000262803 ETHE1O95571 254 aa17.42■□□□□ 0.38
UPF1-201ENST00000262803 DHODHQ02127 395 aa17.42■□□□□ 0.38
UPF1-201ENST00000262803 ZNF784Q8NCA9 323 aaPredicted RBP17.42■□□□□ 0.38
UPF1-201ENST00000262803 BCL7CQ8WUZ0 217 aaPredicted RBP17.42■□□□□ 0.38
UPF1-201ENST00000262803 TEX101Q9BY14 249 aa17.42■□□□□ 0.38
UPF1-201ENST00000262803 METTL12A8MUP2 240 aa17.42■□□□□ 0.38
UPF1-201ENST00000262803 TERTO14746 1132 aaKnown RBP17.42■□□□□ 0.38
UPF1-201ENST00000262803 FZD6O60353 706 aa17.42■□□□□ 0.38
UPF1-201ENST00000262803 PTAFRP25105 342 aa17.42■□□□□ 0.38
UPF1-201ENST00000262803 EDDM3AQ14507 147 aa17.42■□□□□ 0.38
UPF1-201ENST00000262803 CD276Q5ZPR3 534 aa17.42■□□□□ 0.38
UPF1-201ENST00000262803 CDC20BQ86Y33 519 aa17.42■□□□□ 0.38
UPF1-201ENST00000262803 MRGPRX1Q96LB2 322 aa17.42■□□□□ 0.38
UPF1-201ENST00000262803 TNFSF15O95150 251 aa17.42■□□□□ 0.38
UPF1-201ENST00000262803 TGFBR1P36897 503 aa17.42■□□□□ 0.38
UPF1-201ENST00000262803 DIO1P49895 249 aa17.42■□□□□ 0.38
UPF1-201ENST00000262803 LIPNQ5VXI9 398 aa17.42■□□□□ 0.38
UPF1-201ENST00000262803 C3orf49Q96BT1 292 aa17.42■□□□□ 0.38
UPF1-201ENST00000262803 NIPSNAP3BQ9BS92 247 aa17.42■□□□□ 0.38
UPF1-201ENST00000262803 NDFIP1Q9BT67 221 aa17.42■□□□□ 0.38
UPF1-201ENST00000262803 ACOXLQ9NUZ1 547 aa17.42■□□□□ 0.38
UPF1-201ENST00000262803 FBXO4Q9UKT5 387 aa17.42■□□□□ 0.38
UPF1-201ENST00000262803 RPH3ALQ9UNE2 315 aa17.42■□□□□ 0.38
UPF1-201ENST00000262803 COL22A1Q8NFW1 1626 aaPredicted RBP17.42■□□□□ 0.38
UPF1-201ENST00000262803 B4GALT3O60512 393 aa17.42■□□□□ 0.38
UPF1-201ENST00000262803 FCMRO60667 390 aa17.42■□□□□ 0.38
UPF1-201ENST00000262803 TRAPPC2P0DI81 140 aa17.42■□□□□ 0.38
UPF1-201ENST00000262803 TRAPPC2BP0DI82 140 aa17.42■□□□□ 0.38
UPF1-201ENST00000262803 CT45A10P0DMU9 189 aa17.42■□□□□ 0.38
UPF1-201ENST00000262803 CPEP16870 476 aa17.42■□□□□ 0.38
UPF1-201ENST00000262803 S100A11P31949 105 aa17.42■□□□□ 0.38
UPF1-201ENST00000262803 ASAH1Q13510 395 aa17.42■□□□□ 0.38
UPF1-201ENST00000262803 Q6ZNB5 142 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms