RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 CAPNS1P04632 268 aa12.31□□□□□ -0.44
PDGFRB-201ENST00000261799 GABRA5P31644 462 aa12.31□□□□□ -0.44
PDGFRB-201ENST00000261799 METAP1P53582 386 aa12.31□□□□□ -0.44
PDGFRB-201ENST00000261799 PPP1CAP62136 330 aa12.31□□□□□ -0.44
PDGFRB-201ENST00000261799 RHBDD2Q6NTF9 364 aa12.31□□□□□ -0.44
PDGFRB-201ENST00000261799 B3GNT8Q7Z7M8 397 aa12.31□□□□□ -0.44
PDGFRB-201ENST00000261799 BATF2Q8N1L9 274 aa12.31□□□□□ -0.44
PDGFRB-201ENST00000261799 C17orf78Q8N4C9 275 aa12.31□□□□□ -0.44
PDGFRB-201ENST00000261799 OR10G3Q8NGC4 313 aa12.31□□□□□ -0.44
PDGFRB-201ENST00000261799 TAAR3PQ9P1P4 343 aa12.31□□□□□ -0.44
PDGFRB-201ENST00000261799 KCNMB2Q9Y691 235 aa12.31□□□□□ -0.44
PDGFRB-201ENST00000261799 PHF1O43189 567 aaPredicted RBP12.31□□□□□ -0.44
PDGFRB-201ENST00000261799 FZD6O60353 706 aa12.31□□□□□ -0.44
PDGFRB-201ENST00000261799 GOSR1O95249 250 aa12.31□□□□□ -0.44
PDGFRB-201ENST00000261799 RPL18Q07020 188 aaKnown RBP12.31□□□□□ -0.44
PDGFRB-201ENST00000261799 PMPCAQ10713 525 aa12.31□□□□□ -0.44
PDGFRB-201ENST00000261799 ABI3BPQ7Z7G0 1075 aa12.31□□□□□ -0.44
PDGFRB-201ENST00000261799 A0A0A6YYD5 115 aa12.3□□□□□ -0.44
PDGFRB-201ENST00000261799 PRSS37A4D1T9 235 aa12.3□□□□□ -0.44
PDGFRB-201ENST00000261799 AADACP22760 399 aa12.3□□□□□ -0.44
PDGFRB-201ENST00000261799 ABCD3P28288 659 aa12.3□□□□□ -0.44
PDGFRB-201ENST00000261799 RAB1AP62820 205 aa12.3□□□□□ -0.44
PDGFRB-201ENST00000261799 ERHP84090 104 aaKnown RBP12.3□□□□□ -0.44
PDGFRB-201ENST00000261799 ZNF91Q05481 1191 aa12.3□□□□□ -0.44
PDGFRB-201ENST00000261799 HNF4GQ14541 408 aa12.3□□□□□ -0.44
PDGFRB-201ENST00000261799 ZNF696Q9H7X3 374 aa12.3□□□□□ -0.44
PDGFRB-201ENST00000261799 CHATP28329 748 aa12.3□□□□□ -0.44
PDGFRB-201ENST00000261799 UBE2G2P60604 165 aa12.3□□□□□ -0.44
PDGFRB-201ENST00000261799 ISXQ2M1V0 245 aa12.3□□□□□ -0.44
PDGFRB-201ENST00000261799 SPINK14Q6IE38 97 aa12.3□□□□□ -0.44
PDGFRB-201ENST00000261799 TMPRSS7Q7RTY8 843 aa12.3□□□□□ -0.44
PDGFRB-201ENST00000261799 OR1M1Q8NGA1 313 aa12.3□□□□□ -0.44
PDGFRB-201ENST00000261799 RBMXL1Q96E39 390 aaKnown RBP12.3□□□□□ -0.44
PDGFRB-201ENST00000261799 SPATA46Q5T0L3 261 aa12.3□□□□□ -0.44
PDGFRB-201ENST00000261799 CST9LP1Q5W188 147 aa12.3□□□□□ -0.44
PDGFRB-201ENST00000261799 SLC30A7Q8NEW0 376 aa12.3□□□□□ -0.44
PDGFRB-201ENST00000261799 ECM29Q5VYK3 1845 aa12.3□□□□□ -0.44
PDGFRB-201ENST00000261799 ALG1L2C9J202 215 aa12.3□□□□□ -0.44
PDGFRB-201ENST00000261799 TOXO94900 526 aa12.3□□□□□ -0.44
PDGFRB-201ENST00000261799 NCS1P62166 190 aa12.3□□□□□ -0.44
PDGFRB-201ENST00000261799 OGFOD3Q6PK18 319 aa12.3□□□□□ -0.44
PDGFRB-201ENST00000261799 Q6ZSR9 355 aa12.3□□□□□ -0.44
PDGFRB-201ENST00000261799 OLIG3Q7RTU3 272 aa12.3□□□□□ -0.44
PDGFRB-201ENST00000261799 ANGPTL5Q86XS5 388 aa12.3□□□□□ -0.44
PDGFRB-201ENST00000261799 OR14K1Q8NGZ2 314 aa12.3□□□□□ -0.44
PDGFRB-201ENST00000261799 TAAR6Q96RI8 345 aa12.3□□□□□ -0.44
PDGFRB-201ENST00000261799 PKMYT1Q99640 499 aa12.3□□□□□ -0.44
PDGFRB-201ENST00000261799 ZCCHC4Q9H5U6 513 aa12.3□□□□□ -0.44
PDGFRB-201ENST00000261799 GALNT9Q9HCQ5 603 aa12.3□□□□□ -0.44
PDGFRB-201ENST00000261799 A3GALT2U3KPV4 340 aa12.3□□□□□ -0.44
PDGFRB-201ENST00000261799 ZNF816-ZNF321PA0A0X1KG74 233 aa12.3□□□□□ -0.44
PDGFRB-201ENST00000261799 HPGDSO60760 199 aa12.3□□□□□ -0.44
PDGFRB-201ENST00000261799 CELA2BP08218 269 aaPredicted RBP12.3□□□□□ -0.44
PDGFRB-201ENST00000261799 DIO1P49895 249 aa12.3□□□□□ -0.44
PDGFRB-201ENST00000261799 STARD6P59095 220 aa12.3□□□□□ -0.44
PDGFRB-201ENST00000261799 RETREG3Q86VR2 466 aa12.3□□□□□ -0.44
PDGFRB-201ENST00000261799 C12orf45Q8N5I9 185 aaPredicted RBP12.3□□□□□ -0.44
PDGFRB-201ENST00000261799 SLC39A9Q9NUM3 307 aa12.3□□□□□ -0.44
PDGFRB-201ENST00000261799 MARF1Q9Y4F3 1742 aaKnown RBP12.29□□□□□ -0.44
PDGFRB-201ENST00000261799 OR5H14A6NHG9 310 aa12.29□□□□□ -0.44
PDGFRB-201ENST00000261799 OR5H1A6NKK0 313 aa12.29□□□□□ -0.44
PDGFRB-201ENST00000261799 AIPO00170 330 aa12.29□□□□□ -0.44
PDGFRB-201ENST00000261799 MRPL19P49406 292 aaKnown RBP12.29□□□□□ -0.44
PDGFRB-201ENST00000261799 NKX6-1P78426 367 aaPredicted RBP12.29□□□□□ -0.44
PDGFRB-201ENST00000261799 NKG7Q16617 165 aa12.29□□□□□ -0.44
PDGFRB-201ENST00000261799 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.29□□□□□ -0.44
PDGFRB-201ENST00000261799 B3GLCTQ6Y288 498 aa12.29□□□□□ -0.44
PDGFRB-201ENST00000261799 BBS1Q8NFJ9 593 aa12.29□□□□□ -0.44
PDGFRB-201ENST00000261799 UCK1Q9HA47 277 aa12.29□□□□□ -0.44
PDGFRB-201ENST00000261799 GPR55Q9Y2T6 319 aaPredicted RBP12.29□□□□□ -0.44
PDGFRB-201ENST00000261799 STRCP1A6NGW2 1772 aa12.29□□□□□ -0.44
PDGFRB-201ENST00000261799 OR2A25A4D2G3 310 aa12.29□□□□□ -0.44
PDGFRB-201ENST00000261799 UPK1AO00322 258 aa12.29□□□□□ -0.44
PDGFRB-201ENST00000261799 SLC16A6O15403 523 aa12.29□□□□□ -0.44
PDGFRB-201ENST00000261799 PCSK6P29122 969 aa12.29□□□□□ -0.44
PDGFRB-201ENST00000261799 AQP6Q13520 282 aa12.29□□□□□ -0.44
PDGFRB-201ENST00000261799 C1orf185Q5T7R7 199 aa12.29□□□□□ -0.44
PDGFRB-201ENST00000261799 ACSM5Q6NUN0 579 aa12.29□□□□□ -0.44
PDGFRB-201ENST00000261799 CCL17Q92583 94 aa12.29□□□□□ -0.44
PDGFRB-201ENST00000261799 DPF1Q92782 380 aa12.29□□□□□ -0.44
PDGFRB-201ENST00000261799 GHSRQ92847 366 aa12.29□□□□□ -0.44
PDGFRB-201ENST00000261799 TM4SF19Q96DZ7 209 aa12.29□□□□□ -0.44
PDGFRB-201ENST00000261799 RREB1Q92766 1687 aa12.29□□□□□ -0.44
PDGFRB-201ENST00000261799 HSBP1L1C9JCN9 74 aa12.29□□□□□ -0.44
PDGFRB-201ENST00000261799 HLA-AP01891 365 aaKnown RBP12.29□□□□□ -0.44
PDGFRB-201ENST00000261799 TRIM23P36406 574 aa12.29□□□□□ -0.44
PDGFRB-201ENST00000261799 S100A12P80511 92 aa12.29□□□□□ -0.44
PDGFRB-201ENST00000261799 MS4A2Q01362 244 aa12.29□□□□□ -0.44
PDGFRB-201ENST00000261799 PHYHIPQ92561 330 aa12.29□□□□□ -0.44
PDGFRB-201ENST00000261799 GNRHR2Q96P88 292 aa12.29□□□□□ -0.44
PDGFRB-201ENST00000261799 MED29Q9NX70 200 aa12.29□□□□□ -0.44
PDGFRB-201ENST00000261799 B4E171 279 aa12.29□□□□□ -0.44
PDGFRB-201ENST00000261799 CCL4P13236 92 aa12.29□□□□□ -0.44
PDGFRB-201ENST00000261799 TSPAN7P41732 249 aa12.29□□□□□ -0.44
PDGFRB-201ENST00000261799 HAAOP46952 286 aa12.29□□□□□ -0.44
PDGFRB-201ENST00000261799 GABRA4P48169 554 aa12.29□□□□□ -0.44
PDGFRB-201ENST00000261799 PPT1P50897 306 aa12.29□□□□□ -0.44
PDGFRB-201ENST00000261799 GK2Q14410 553 aaPredicted RBP12.29□□□□□ -0.44
PDGFRB-201ENST00000261799 KRTCAP3Q53RY4 240 aa12.29□□□□□ -0.44
PDGFRB-201ENST00000261799 SMIM3Q9BZL3 60 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms