RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 RDH5Q92781 318 aa13.06□□□□□ -0.32
CUX2-201ENST00000261726 TMEM230Q96A57 120 aa13.06□□□□□ -0.32
CUX2-201ENST00000261726 NEURL3Q96EH8 262 aa13.06□□□□□ -0.32
CUX2-201ENST00000261726 CSF3RQ99062 836 aa13.06□□□□□ -0.32
CUX2-201ENST00000261726 SPACA1Q9HBV2 294 aa13.06□□□□□ -0.32
CUX2-201ENST00000261726 FLVCR1Q9Y5Y0 555 aa13.06□□□□□ -0.32
CUX2-201ENST00000261726 TIAM2Q8IVF5 1701 aa13.06□□□□□ -0.32
CUX2-201ENST00000261726 ARAP2Q8WZ64 1704 aa13.06□□□□□ -0.32
CUX2-201ENST00000261726 ANKRD12Q6UB98 2062 aa13.06□□□□□ -0.32
CUX2-201ENST00000261726 ZNF85Q03923 595 aa13.06□□□□□ -0.32
CUX2-201ENST00000261726 ZNF385BQ569K4 471 aa13.06□□□□□ -0.32
CUX2-201ENST00000261726 SLC35D3Q5M8T2 416 aa13.06□□□□□ -0.32
CUX2-201ENST00000261726 C17orf107Q6ZR85 190 aa13.06□□□□□ -0.32
CUX2-201ENST00000261726 TSEN54Q7Z6J9 526 aaKnown RBP13.06□□□□□ -0.32
CUX2-201ENST00000261726 SEH1LQ96EE3 360 aa13.06□□□□□ -0.32
CUX2-201ENST00000261726 NKX6-2Q9C056 277 aaPredicted RBP13.06□□□□□ -0.32
CUX2-201ENST00000261726 COL5A3P25940 1745 aaPredicted RBP13.06□□□□□ -0.32
CUX2-201ENST00000261726 RD3LP0DJH9 198 aa13.06□□□□□ -0.32
CUX2-201ENST00000261726 RFX2P48378 723 aa13.06□□□□□ -0.32
CUX2-201ENST00000261726 HSF1Q00613 529 aa13.06□□□□□ -0.32
CUX2-201ENST00000261726 USP51Q70EK9 711 aa13.06□□□□□ -0.32
CUX2-201ENST00000261726 SLC16A11Q8NCK7 471 aa13.06□□□□□ -0.32
CUX2-201ENST00000261726 SCARB1Q8WTV0 552 aa13.06□□□□□ -0.32
CUX2-201ENST00000261726 ZDHHC16Q969W1 377 aa13.06□□□□□ -0.32
CUX2-201ENST00000261726 EDEM2Q9BV94 578 aa13.06□□□□□ -0.32
CUX2-201ENST00000261726 TIMM9Q9Y5J7 89 aa13.06□□□□□ -0.32
CUX2-201ENST00000261726 GON4LQ3T8J9 2241 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 KIR2DS1A0A191URI9 304 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 UMAD1C9J7I0 102 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 M0R082 166 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 SMIM17P0DL12 118 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 FPR3P25089 353 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 KIR2DS4P43632 304 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 KIR2DS1Q14954 304 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 ADAMTSL4Q6UY14 1074 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 ZNF620Q6ZNG0 422 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 LRRTM1Q86UE6 522 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 OR5M8Q8NGP6 311 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 SLC7A6Q92536 515 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 TECTBQ96PL2 329 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 LYSMD1Q96S90 227 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 DHRS4Q9BTZ2 278 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 B3GALNT1O75752 331 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 SEMG1P04279 462 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 EN2P19622 333 aaPredicted RBP13.05□□□□□ -0.32
CUX2-201ENST00000261726 TBXA2RP21731 343 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 LAMB2P55268 1798 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 TAS2R45P59539 299 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 RBM45Q8IUH3 476 aaKnown RBP13.05□□□□□ -0.32
CUX2-201ENST00000261726 MRPL19P49406 292 aaKnown RBP13.05□□□□□ -0.32
CUX2-201ENST00000261726 CCSMST1Q4G0I0 132 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 CCDC74AQ96AQ1 378 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 SPACA5Q96QH8 159 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 GMLQ99445 158 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 C20orf27Q9GZN8 174 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 NIT2Q9NQR4 276 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 FBXL4Q9UKA2 621 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 TMEM200CA6NKL6 621 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 H7BYZ3 331 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 ST8SIA3O43173 380 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 PDZK1IP1Q13113 114 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 GRINAQ7Z429 371 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 ZNF583Q96ND8 569 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 MED18Q9BUE0 208 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 FOXQ1Q9C009 403 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 SLC17A4Q9Y2C5 497 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 CPN1P15169 458 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 PPIAP62937 165 aaKnown RBP13.05□□□□□ -0.32
CUX2-201ENST00000261726 ERHP84090 104 aaKnown RBP13.05□□□□□ -0.32
CUX2-201ENST00000261726 DOC2BQ14184 412 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 OR2M7Q8NG81 312 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 TMPRSS5Q9H3S3 457 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 LOC107986453A0A1B0GWG9 222 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 A0A1W2PNR3 127 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 TMEM189-UBE2V1I3L0A0 370 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 SDCBPO00560 298 aaPredicted RBP13.05□□□□□ -0.32
CUX2-201ENST00000261726 MT-ATP6P00846 226 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 CSNK1G2P78368 415 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 LFNGQ8NES3 379 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 ST8SIA2Q92186 375 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 PDXPQ96GD0 296 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 NUDT9Q9BW91 350 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 HDAC8Q9BY41 377 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 CHST6Q9GZX3 395 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 PROCRQ9UNN8 238 aa13.05□□□□□ -0.32
CUX2-201ENST00000261726 PIAS2O75928 621 aa13.04□□□□□ -0.32
CUX2-201ENST00000261726 SPRED1Q7Z699 444 aa13.04□□□□□ -0.32
CUX2-201ENST00000261726 SLC25A21Q9BQT8 299 aaPredicted RBP13.04□□□□□ -0.32
CUX2-201ENST00000261726 CTDSP1Q9GZU7 261 aa13.04□□□□□ -0.32
CUX2-201ENST00000261726 UBQLN3Q9H347 655 aa13.04□□□□□ -0.32
CUX2-201ENST00000261726 G3V3Q6 166 aa13.04□□□□□ -0.32
CUX2-201ENST00000261726 MPGP29372 298 aa13.04□□□□□ -0.32
CUX2-201ENST00000261726 CCR9P51686 369 aa13.04□□□□□ -0.32
CUX2-201ENST00000261726 OR2L13Q8N349 312 aa13.04□□□□□ -0.32
CUX2-201ENST00000261726 GPR32P1Q8NGA4 272 aa13.04□□□□□ -0.32
CUX2-201ENST00000261726 FAM117AQ9C073 453 aa13.04□□□□□ -0.32
CUX2-201ENST00000261726 TAPBPO15533 448 aa13.04□□□□□ -0.32
CUX2-201ENST00000261726 IHHQ14623 411 aa13.04□□□□□ -0.32
CUX2-201ENST00000261726 SLCO4A1Q96BD0 722 aa13.04□□□□□ -0.32
CUX2-201ENST00000261726 PDLIM7Q9NR12 457 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms