RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 PRSS35Q8N3Z0 413 aa13.09□□□□□ -0.31
TRAFD1-201ENST00000257604 OR8S1Q8NH09 359 aa13.09□□□□□ -0.31
TRAFD1-201ENST00000257604 OR56B4Q8NH76 319 aa13.09□□□□□ -0.31
TRAFD1-201ENST00000257604 SPACA9Q96E40 222 aaPredicted RBP13.09□□□□□ -0.31
TRAFD1-201ENST00000257604 WIF1Q9Y5W5 379 aa13.09□□□□□ -0.31
TRAFD1-201ENST00000257604 L7N2F9 121 aa13.09□□□□□ -0.31
TRAFD1-201ENST00000257604 SULT2B1O00204 365 aa13.09□□□□□ -0.31
TRAFD1-201ENST00000257604 PEX14O75381 377 aa13.09□□□□□ -0.31
TRAFD1-201ENST00000257604 APOC3P02656 99 aa13.09□□□□□ -0.31
TRAFD1-201ENST00000257604 IFI6P09912 130 aa13.09□□□□□ -0.31
TRAFD1-201ENST00000257604 CLRN1P58418 232 aa13.09□□□□□ -0.31
TRAFD1-201ENST00000257604 TAF13Q15543 124 aa13.09□□□□□ -0.31
TRAFD1-201ENST00000257604 SGCAQ16586 387 aa13.09□□□□□ -0.31
TRAFD1-201ENST00000257604 LRRC18Q8N456 261 aa13.09□□□□□ -0.31
TRAFD1-201ENST00000257604 MEIOBQ8N635 442 aa13.09□□□□□ -0.31
TRAFD1-201ENST00000257604 OR6M1Q8NGM8 313 aa13.09□□□□□ -0.31
TRAFD1-201ENST00000257604 OTOSQ8NHW6 89 aa13.09□□□□□ -0.31
TRAFD1-201ENST00000257604 HGDQ93099 445 aa13.09□□□□□ -0.31
TRAFD1-201ENST00000257604 FAM46BQ96A09 425 aa13.09□□□□□ -0.31
TRAFD1-201ENST00000257604 C12orf10Q9HB07 376 aa13.09□□□□□ -0.31
TRAFD1-201ENST00000257604 MED13Q9UHV7 2174 aa13.08□□□□□ -0.31
TRAFD1-201ENST00000257604 P2RY10O00398 339 aa13.08□□□□□ -0.32
TRAFD1-201ENST00000257604 STK17BO94768 372 aa13.08□□□□□ -0.32
TRAFD1-201ENST00000257604 SPDEFO95238 335 aa13.08□□□□□ -0.32
TRAFD1-201ENST00000257604 LIPCP11150 499 aa13.08□□□□□ -0.32
TRAFD1-201ENST00000257604 MMP15P51511 669 aa13.08□□□□□ -0.32
TRAFD1-201ENST00000257604 KLF9Q13886 244 aaPredicted RBP13.08□□□□□ -0.32
TRAFD1-201ENST00000257604 Q499Y3 187 aa13.08□□□□□ -0.32
TRAFD1-201ENST00000257604 BEX5Q5H9J7 111 aa13.08□□□□□ -0.32
TRAFD1-201ENST00000257604 FAM74A1Q5RGS3 127 aa13.08□□□□□ -0.32
TRAFD1-201ENST00000257604 WDR5BQ86VZ2 330 aa13.08□□□□□ -0.32
TRAFD1-201ENST00000257604 CDC20BQ86Y33 519 aa13.08□□□□□ -0.32
TRAFD1-201ENST00000257604 ST8SIA4Q92187 359 aa13.08□□□□□ -0.32
TRAFD1-201ENST00000257604 NARS2Q96I59 477 aaKnown RBP13.08□□□□□ -0.32
TRAFD1-201ENST00000257604 MNTQ99583 582 aa13.08□□□□□ -0.32
TRAFD1-201ENST00000257604 MOKQ9UQ07 419 aa13.08□□□□□ -0.32
TRAFD1-201ENST00000257604 HS3ST3B1Q9Y662 390 aa13.08□□□□□ -0.32
TRAFD1-201ENST00000257604 DSPP15924 2871 aaKnown RBP13.08□□□□□ -0.32
TRAFD1-201ENST00000257604 A0A1B0GVI7 797 aa13.08□□□□□ -0.32
TRAFD1-201ENST00000257604 WDPCPO95876 746 aa13.08□□□□□ -0.32
TRAFD1-201ENST00000257604 CSN2P05814 226 aa13.08□□□□□ -0.32
TRAFD1-201ENST00000257604 UMODP07911 640 aa13.08□□□□□ -0.32
TRAFD1-201ENST00000257604 ATRAIDQ6UW56 229 aa13.08□□□□□ -0.32
TRAFD1-201ENST00000257604 CARFQ8N187 725 aa13.08□□□□□ -0.32
TRAFD1-201ENST00000257604 MARVELD3Q96A59 401 aa13.08□□□□□ -0.32
TRAFD1-201ENST00000257604 TGIF2Q9GZN2 237 aa13.08□□□□□ -0.32
TRAFD1-201ENST00000257604 PTGES2Q9H7Z7 377 aa13.08□□□□□ -0.32
TRAFD1-201ENST00000257604 HRASLSQ9HDD0 168 aa13.08□□□□□ -0.32
TRAFD1-201ENST00000257604 SERINC1Q9NRX5 453 aa13.08□□□□□ -0.32
TRAFD1-201ENST00000257604 HPF1Q9NWY4 346 aa13.08□□□□□ -0.32
TRAFD1-201ENST00000257604 TMEM269A0A1B0GVZ9 245 aa13.08□□□□□ -0.32
TRAFD1-201ENST00000257604 A0A1W2PQD3 144 aa13.08□□□□□ -0.32
TRAFD1-201ENST00000257604 ANKUB1A6NFN9 424 aa13.08□□□□□ -0.32
TRAFD1-201ENST00000257604 IFITM5A6NNB3 132 aa13.08□□□□□ -0.32
TRAFD1-201ENST00000257604 ADRA2CP18825 462 aa13.08□□□□□ -0.32
TRAFD1-201ENST00000257604 DPP4P27487 766 aa13.08□□□□□ -0.32
TRAFD1-201ENST00000257604 FOLR3P41439 243 aa13.08□□□□□ -0.32
TRAFD1-201ENST00000257604 STARP49675 285 aa13.08□□□□□ -0.32
TRAFD1-201ENST00000257604 RIDAP52758 137 aaKnown RBP13.08□□□□□ -0.32
TRAFD1-201ENST00000257604 TMEM69Q5SWH9 247 aa13.08□□□□□ -0.32
TRAFD1-201ENST00000257604 C3P1Q6ZMU1 363 aa13.08□□□□□ -0.32
TRAFD1-201ENST00000257604 PXKQ7Z7A4 578 aa13.08□□□□□ -0.32
TRAFD1-201ENST00000257604 RPS19BP1Q86WX3 136 aaKnown RBP13.08□□□□□ -0.32
TRAFD1-201ENST00000257604 DMRTA2Q96SC8 542 aa13.08□□□□□ -0.32
TRAFD1-201ENST00000257604 EVA1AQ9H8M9 152 aa13.08□□□□□ -0.32
TRAFD1-201ENST00000257604 LRP12Q9Y561 859 aa13.08□□□□□ -0.32
TRAFD1-201ENST00000257604 MRPS18BQ9Y676 258 aaKnown RBP13.08□□□□□ -0.32
TRAFD1-201ENST00000257604 KCNMB2Q9Y691 235 aa13.08□□□□□ -0.32
TRAFD1-201ENST00000257604 LOC100509620A0A075B734 347 aa13.07□□□□□ -0.32
TRAFD1-201ENST00000257604 hCG_1807616A0A1W2PRN6 198 aa13.07□□□□□ -0.32
TRAFD1-201ENST00000257604 LPLP06858 475 aa13.07□□□□□ -0.32
TRAFD1-201ENST00000257604 H2BFMP0C1H6 154 aa13.07□□□□□ -0.32
TRAFD1-201ENST00000257604 ZNF43P17038 809 aa13.07□□□□□ -0.32
TRAFD1-201ENST00000257604 CAPZA2P47755 286 aa13.07□□□□□ -0.32
TRAFD1-201ENST00000257604 CCR9P51686 369 aa13.07□□□□□ -0.32
TRAFD1-201ENST00000257604 PSMA6P60900 246 aaKnown RBP13.07□□□□□ -0.32
TRAFD1-201ENST00000257604 ATXN7L3Q14CW9 347 aaPredicted RBP13.07□□□□□ -0.32
TRAFD1-201ENST00000257604 TRAM1Q15629 374 aa13.07□□□□□ -0.32
TRAFD1-201ENST00000257604 C2orf68Q2NKX9 166 aa13.07□□□□□ -0.32
TRAFD1-201ENST00000257604 DHRS13Q6UX07 377 aa13.07□□□□□ -0.32
TRAFD1-201ENST00000257604 TPRA1Q86W33 373 aa13.07□□□□□ -0.32
TRAFD1-201ENST00000257604 OR51A2Q8NGJ7 313 aa13.07□□□□□ -0.32
TRAFD1-201ENST00000257604 NPRL2Q8WTW4 380 aa13.07□□□□□ -0.32
TRAFD1-201ENST00000257604 UCN2Q96RP3 112 aa13.07□□□□□ -0.32
TRAFD1-201ENST00000257604 GPX7Q96SL4 187 aaPredicted RBP13.07□□□□□ -0.32
TRAFD1-201ENST00000257604 GFI1Q99684 422 aa13.07□□□□□ -0.32
TRAFD1-201ENST00000257604 AKAP7Q9P0M2 348 aaPredicted RBP13.07□□□□□ -0.32
TRAFD1-201ENST00000257604 ZMAT5Q9UDW3 170 aaKnown RBP13.07□□□□□ -0.32
TRAFD1-201ENST00000257604 LNP1A1A4G5 178 aa13.07□□□□□ -0.32
TRAFD1-201ENST00000257604 TOX3O15405 576 aaPredicted RBP13.07□□□□□ -0.32
TRAFD1-201ENST00000257604 MT-ATP6P00846 226 aa13.07□□□□□ -0.32
TRAFD1-201ENST00000257604 IGHV3-9P01782 118 aa13.07□□□□□ -0.32
TRAFD1-201ENST00000257604 CTRB1P17538 263 aa13.07□□□□□ -0.32
TRAFD1-201ENST00000257604 NUP62P37198 522 aaPredicted RBP13.07□□□□□ -0.32
TRAFD1-201ENST00000257604 KIR3DL2P43630 455 aa13.07□□□□□ -0.32
TRAFD1-201ENST00000257604 DUSP3P51452 185 aaPredicted RBP13.07□□□□□ -0.32
TRAFD1-201ENST00000257604 AKR1C2P52895 323 aa13.07□□□□□ -0.32
TRAFD1-201ENST00000257604 AKR1C1Q04828 323 aa13.07□□□□□ -0.32
TRAFD1-201ENST00000257604 SRYQ05066 204 aa13.07□□□□□ -0.32
TRAFD1-201ENST00000257604 GGTLC2Q14390 218 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms