RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 SLC5A6Q9Y289 635 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 PRSS37A4D1T9 235 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 LILRA5A6NI73 299 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 K7EQM0 130 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 DUSP1P28562 367 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 POLR2IP36954 125 aaKnown RBP7.93□□□□□ -1.14
PTCD3-201ENST00000254630 GPR12P47775 334 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 ASTLQ6HA08 431 aaPredicted RBP7.93□□□□□ -1.14
PTCD3-201ENST00000254630 ZNF620Q6ZNG0 422 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 PRSS45Q7RTY3 260 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 PRSS35Q8N3Z0 413 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 PBOV1Q9GZY1 135 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 FIGNL2A6NMB9 653 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 NRASP01111 189 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 RPL35P42766 123 aaKnown RBP7.92□□□□□ -1.14
PTCD3-201ENST00000254630 RAB13P51153 203 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 PNLIPRP2P54317 469 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 ZNF573Q86YE8 665 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 SUMF1Q8NBK3 374 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 RIMS4Q9H426 269 aaPredicted RBP7.92□□□□□ -1.14
PTCD3-201ENST00000254630 RGPD3A6NKT7 1758 aaPredicted RBP7.92□□□□□ -1.14
PTCD3-201ENST00000254630 TRABD2BA6NFA1 517 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 EFSO43281 561 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 TGM6O95932 706 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 TCRBP04435 133 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 RFC3P40938 356 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 RELAQ04206 551 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 Q6ZS52 159 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 PLPP5Q8NEB5 264 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 SLC25A46Q96AG3 418 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 FN3KRPQ9HA64 309 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 ZNF225Q9UK10 706 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 YBX2Q9Y2T7 364 aaKnown RBP7.92□□□□□ -1.14
PTCD3-201ENST00000254630 CXorf51AA0A1B0GTR3 108 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 SMLR1H3BR10 107 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 IGFBP1P08833 259 aaPredicted RBP7.92□□□□□ -1.14
PTCD3-201ENST00000254630 GNB3P16520 340 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 NPBWR1P48145 328 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 HABP2Q14520 560 aaPredicted RBP7.92□□□□□ -1.14
PTCD3-201ENST00000254630 ZNF266Q14584 549 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 CYHR1Q6ZMK1 362 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 ZFP82Q8N141 532 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 LGI3Q8N145 548 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 OR2AE1Q8NHA4 323 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 OR2V1Q8NHB1 315 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 TERB2Q8NHR7 220 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 OPALINQ96PE5 141 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 MED18Q9BUE0 208 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 CMC2Q9NRP2 79 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 PCYT1BQ9Y5K3 369 aaPredicted RBP7.92□□□□□ -1.14
PTCD3-201ENST00000254630 TMEM200CA6NKL6 621 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 IMPA2O14732 288 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 ATP1B1P05026 303 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 PTBP1P26599 531 aaKnown RBP eCLIP7.92□□□□□ -1.147e-11■■■■■ 35.2
PTCD3-201ENST00000254630 FOXF1Q12946 379 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 OPCMLQ14982 345 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 HIST2H3PS2Q5TEC6 136 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 CADM4Q8NFZ8 388 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 CMTM2Q8TAZ6 248 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 OR2A14Q96R47 310 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 ZMAT3Q9HA38 289 aaKnown RBP7.92□□□□□ -1.14
PTCD3-201ENST00000254630 ASB1Q9Y576 335 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 MKRN2OSH3BPM6 223 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 UPK1AO00322 258 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 HTR4Q13639 388 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 OR1C1Q15619 314 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 TRILQ7L0X0 811 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 PDCD1LG2Q9BQ51 273 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 IL21Q9HBE4 155 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 SLC25A19Q9HC21 320 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 CRLF2Q9HC73 371 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 HEYLQ9NQ87 328 aaPredicted RBP7.92□□□□□ -1.14
PTCD3-201ENST00000254630 CTSFQ9UBX1 484 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 TCRBV5S2A0A599 114 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 M0R135 149 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 TERTO14746 1132 aaKnown RBP7.92□□□□□ -1.14
PTCD3-201ENST00000254630 CTXN2P0C2S0 81 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 TBPP20226 339 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 ELFN2Q5R3F8 820 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 ZNF799Q96GE5 643 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 SLC35E1Q96K37 410 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 TAAR6Q96RI8 345 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 TMEM43Q9BTV4 400 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 C11orf54Q9H0W9 315 aaPredicted RBP7.92□□□□□ -1.14
PTCD3-201ENST00000254630 CLEC1BQ9P126 229 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 CHST2Q9Y4C5 530 aa7.92□□□□□ -1.14
PTCD3-201ENST00000254630 KIR2DS1A0A191URI9 304 aa7.91□□□□□ -1.14
PTCD3-201ENST00000254630 HSPB2A8KAH6 182 aa7.91□□□□□ -1.14
PTCD3-201ENST00000254630 CXCL13O43927 109 aa7.91□□□□□ -1.14
PTCD3-201ENST00000254630 CRYZL1O95825 349 aa7.91□□□□□ -1.14
PTCD3-201ENST00000254630 KIR2DS4P43632 304 aa7.91□□□□□ -1.14
PTCD3-201ENST00000254630 PSMB3P49720 205 aa7.91□□□□□ -1.14
PTCD3-201ENST00000254630 SUMO3P55854 103 aaPredicted RBP7.91□□□□□ -1.14
PTCD3-201ENST00000254630 KIR2DS1Q14954 304 aa7.91□□□□□ -1.14
PTCD3-201ENST00000254630 HSPB2Q16082 182 aa7.91□□□□□ -1.14
PTCD3-201ENST00000254630 SLC7A5P1Q8MH63 180 aa7.91□□□□□ -1.14
PTCD3-201ENST00000254630 PXT1Q8NFP0 134 aa7.91□□□□□ -1.14
PTCD3-201ENST00000254630 TPPP3Q9BW30 176 aa7.91□□□□□ -1.14
PTCD3-201ENST00000254630 PCED1AQ9H1Q7 454 aa7.91□□□□□ -1.14
PTCD3-201ENST00000254630 PLK3Q9H4B4 646 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms