RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 SLC7A13Q8TCU3 470 aa17.81■□□□□ 0.44
NEDD8-201ENST00000250495 PTP4A1Q93096 173 aa17.81■□□□□ 0.44
NEDD8-201ENST00000250495 DCLRE1CQ96SD1 692 aaKnown RBP17.81■□□□□ 0.44
NEDD8-201ENST00000250495 RBM4Q9BWF3 364 aaKnown RBP17.81■□□□□ 0.44
NEDD8-201ENST00000250495 PLEK2Q9NYT0 353 aa17.81■□□□□ 0.44
NEDD8-201ENST00000250495 RPS6KA6Q9UK32 745 aa17.81■□□□□ 0.44
NEDD8-201ENST00000250495 TANC2Q9HCD6 1990 aa17.8■□□□□ 0.44
NEDD8-201ENST00000250495 PPIAL4EA0A075B759 164 aa17.8■□□□□ 0.44
NEDD8-201ENST00000250495 PPIAL4CA0A0B4J2A2 164 aa17.8■□□□□ 0.44
NEDD8-201ENST00000250495 PPIAL4DF5H284 164 aa17.8■□□□□ 0.44
NEDD8-201ENST00000250495 SURF4O15260 269 aa17.8■□□□□ 0.44
NEDD8-201ENST00000250495 KHDRBS3O75525 346 aaKnown RBP17.8■□□□□ 0.44
NEDD8-201ENST00000250495 SBK2P0C263 348 aa17.8■□□□□ 0.44
NEDD8-201ENST00000250495 PPIAL4FP0DN26 164 aa17.8■□□□□ 0.44
NEDD8-201ENST00000250495 CTLA4P16410 223 aa17.8■□□□□ 0.44
NEDD8-201ENST00000250495 ZNF26P17031 533 aaPredicted RBP17.8■□□□□ 0.44
NEDD8-201ENST00000250495 ADRA2CP18825 462 aa17.8■□□□□ 0.44
NEDD8-201ENST00000250495 FPR2P25090 351 aa17.8■□□□□ 0.44
NEDD8-201ENST00000250495 LIMS1P48059 325 aa17.8■□□□□ 0.44
NEDD8-201ENST00000250495 LSM6P62312 80 aaKnown RBP17.8■□□□□ 0.44
NEDD8-201ENST00000250495 LCN2P80188 198 aa17.8■□□□□ 0.44
NEDD8-201ENST00000250495 SPRNQ5BIV9 151 aa17.8■□□□□ 0.44
NEDD8-201ENST00000250495 C8orf82Q6P1X6 216 aaPredicted RBP17.8■□□□□ 0.44
NEDD8-201ENST00000250495 HACD2Q6Y1H2 254 aa17.8■□□□□ 0.44
NEDD8-201ENST00000250495 VASH1Q7L8A9 365 aaPredicted RBP17.8■□□□□ 0.44
NEDD8-201ENST00000250495 OR2Z1Q8NG97 314 aa17.8■□□□□ 0.44
NEDD8-201ENST00000250495 GCDHQ92947 438 aaPredicted RBP17.8■□□□□ 0.44
NEDD8-201ENST00000250495 CMBLQ96DG6 245 aa17.8■□□□□ 0.44
NEDD8-201ENST00000250495 FAM46AQ96IP4 442 aaKnown RBP17.8■□□□□ 0.44
NEDD8-201ENST00000250495 TMEM106BQ9NUM4 274 aa17.8■□□□□ 0.44
NEDD8-201ENST00000250495 STARD10Q9Y365 291 aa17.8■□□□□ 0.44
NEDD8-201ENST00000250495 A0A1W2PRQ8 180 aa17.79■□□□□ 0.44
NEDD8-201ENST00000250495 SLC16A7O60669 478 aa17.79■□□□□ 0.44
NEDD8-201ENST00000250495 DCTN3O75935 186 aa17.79■□□□□ 0.44
NEDD8-201ENST00000250495 IGHV2-70P01814 119 aa17.79■□□□□ 0.44
NEDD8-201ENST00000250495 H1F0P07305 194 aaKnown RBP17.79■□□□□ 0.44
NEDD8-201ENST00000250495 SDHAP31040 664 aa17.79■□□□□ 0.44
NEDD8-201ENST00000250495 COMPP49747 757 aaPredicted RBP17.79■□□□□ 0.44
NEDD8-201ENST00000250495 KRR1Q13601 381 aaKnown RBP17.79■□□□□ 0.44
NEDD8-201ENST00000250495 DGCR6Q14129 220 aa17.79■□□□□ 0.44
NEDD8-201ENST00000250495 GLB1L2Q8IW92 636 aa17.79■□□□□ 0.44
NEDD8-201ENST00000250495 BPIFB2Q8N4F0 458 aa17.79■□□□□ 0.44
NEDD8-201ENST00000250495 KLHL36Q8N4N3 616 aa17.79■□□□□ 0.44
NEDD8-201ENST00000250495 SPICQ8N5J4 248 aa17.79■□□□□ 0.44
NEDD8-201ENST00000250495 HAVCR1Q96D42 359 aa17.79■□□□□ 0.44
NEDD8-201ENST00000250495 KCTD14Q9BQ13 255 aaPredicted RBP17.79■□□□□ 0.44
NEDD8-201ENST00000250495 SYT4Q9H2B2 425 aa17.79■□□□□ 0.44
NEDD8-201ENST00000250495 POFUT1Q9H488 388 aa17.79■□□□□ 0.44
NEDD8-201ENST00000250495 RERGLQ9H628 205 aa17.79■□□□□ 0.44
NEDD8-201ENST00000250495 NRIP3Q9NQ35 241 aa17.79■□□□□ 0.44
NEDD8-201ENST00000250495 IL19Q9UHD0 177 aa17.79■□□□□ 0.44
NEDD8-201ENST00000250495 SIGLEC7Q9Y286 467 aa17.79■□□□□ 0.44
NEDD8-201ENST00000250495 COA3Q9Y2R0 106 aaPredicted RBP17.79■□□□□ 0.44
NEDD8-201ENST00000250495 TMEM89A2RUT3 159 aa17.78■□□□□ 0.44
NEDD8-201ENST00000250495 RHCEP18577 417 aa17.78■□□□□ 0.44
NEDD8-201ENST00000250495 TMEM155Q4W5P6 130 aa17.78■□□□□ 0.44
NEDD8-201ENST00000250495 TSEN54Q7Z6J9 526 aaKnown RBP17.78■□□□□ 0.44
NEDD8-201ENST00000250495 ZNF283Q8N7M2 679 aa17.78■□□□□ 0.44
NEDD8-201ENST00000250495 OR1F12Q8NHA8 337 aa17.78■□□□□ 0.44
NEDD8-201ENST00000250495 RASD2Q96D21 266 aa17.78■□□□□ 0.44
NEDD8-201ENST00000250495 GPX7Q96SL4 187 aaPredicted RBP17.78■□□□□ 0.44
NEDD8-201ENST00000250495 KRCC1Q9NPI7 259 aaPredicted RBP17.78■□□□□ 0.44
NEDD8-201ENST00000250495 VSX1Q9NZR4 365 aaPredicted RBP17.78■□□□□ 0.44
NEDD8-201ENST00000250495 ASH2LQ9UBL3 628 aa17.78■□□□□ 0.44
NEDD8-201ENST00000250495 EGFL7Q9UHF1 273 aa17.78■□□□□ 0.44
NEDD8-201ENST00000250495 OPN4Q9UHM6 478 aa17.78■□□□□ 0.44
NEDD8-201ENST00000250495 AURKCQ9UQB9 309 aa17.78■□□□□ 0.44
NEDD8-201ENST00000250495 J3QW42 95 aa17.77■□□□□ 0.44
NEDD8-201ENST00000250495 RAC2P15153 192 aa17.77■□□□□ 0.44
NEDD8-201ENST00000250495 NCK1P16333 377 aa17.77■□□□□ 0.44
NEDD8-201ENST00000250495 ZFP36P26651 326 aaKnown RBP17.77■□□□□ 0.44
NEDD8-201ENST00000250495 RGS6P49758 472 aa17.77■□□□□ 0.44
NEDD8-201ENST00000250495 NUDT2P50583 147 aa17.77■□□□□ 0.44
NEDD8-201ENST00000250495 FGD3Q5JSP0 725 aa17.77■□□□□ 0.44
NEDD8-201ENST00000250495 C1orf94Q6P1W5 598 aa17.77■□□□□ 0.44
NEDD8-201ENST00000250495 DPY19L2P2Q6ZN68 376 aa17.77■□□□□ 0.44
NEDD8-201ENST00000250495 Q6ZR03 302 aa17.77■□□□□ 0.44
NEDD8-201ENST00000250495 ADCK1Q86TW2 530 aa17.77■□□□□ 0.44
NEDD8-201ENST00000250495 LRRC28Q86X40 367 aaPredicted RBP17.77■□□□□ 0.44
NEDD8-201ENST00000250495 C3orf56Q8N813 242 aa17.77■□□□□ 0.44
NEDD8-201ENST00000250495 OR5L1Q8NGL2 311 aa17.77■□□□□ 0.44
NEDD8-201ENST00000250495 SLC6A7Q99884 636 aa17.77■□□□□ 0.44
NEDD8-201ENST00000250495 NTN4Q9HB63 628 aa17.77■□□□□ 0.44
NEDD8-201ENST00000250495 PATZ1Q9HBE1 687 aaKnown RBP17.77■□□□□ 0.44
NEDD8-201ENST00000250495 DCAF16Q9NXF7 216 aa17.77■□□□□ 0.44
NEDD8-201ENST00000250495 PPP1R3CQ9UQK1 317 aa17.77■□□□□ 0.44
NEDD8-201ENST00000250495 IER3IP1Q9Y5U9 82 aa17.77■□□□□ 0.44
NEDD8-201ENST00000250495 OR6C6A6NF89 314 aa17.76■□□□□ 0.43
NEDD8-201ENST00000250495 GMNNO75496 209 aa17.76■□□□□ 0.43
NEDD8-201ENST00000250495 OMPP47874 163 aa17.76■□□□□ 0.43
NEDD8-201ENST00000250495 RPS6KA3P51812 740 aa17.76■□□□□ 0.43
NEDD8-201ENST00000250495 PSME3P61289 254 aa17.76■□□□□ 0.43
NEDD8-201ENST00000250495 CCDC92Q53HC0 331 aaPredicted RBP17.76■□□□□ 0.43
NEDD8-201ENST00000250495 GLYATQ6IB77 296 aa17.76■□□□□ 0.43
NEDD8-201ENST00000250495 SLC27A4Q6P1M0 643 aa17.76■□□□□ 0.43
NEDD8-201ENST00000250495 ITLN1Q8WWA0 313 aa17.76■□□□□ 0.43
NEDD8-201ENST00000250495 SLC7A6Q92536 515 aa17.76■□□□□ 0.43
NEDD8-201ENST00000250495 CMTM5Q96DZ9 223 aa17.76■□□□□ 0.43
NEDD8-201ENST00000250495 RSRC1Q96IZ7 334 aaKnown RBP17.76■□□□□ 0.43
NEDD8-201ENST00000250495 NUAK2Q9H093 628 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms