RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 SLC22A23A1A5C7 686 aa9.07□□□□□ -0.96
COPB1-201ENST00000249923 DXOO77932 396 aaKnown RBP9.07□□□□□ -0.96
COPB1-201ENST00000249923 GIPP09681 153 aaPredicted RBP9.07□□□□□ -0.96
COPB1-201ENST00000249923 FOLR1P15328 257 aa9.07□□□□□ -0.96
COPB1-201ENST00000249923 IGFBP3P17936 291 aaPredicted RBP9.07□□□□□ -0.96
COPB1-201ENST00000249923 SEC61A1P61619 476 aaKnown RBP9.07□□□□□ -0.96
COPB1-201ENST00000249923 EIF2B1Q14232 305 aaKnown RBP9.07□□□□□ -0.96
COPB1-201ENST00000249923 NR0B2Q15466 257 aa9.07□□□□□ -0.96
COPB1-201ENST00000249923 SHISA6Q6ZSJ9 500 aa9.07□□□□□ -0.96
COPB1-201ENST00000249923 NAXEQ8NCW5 288 aa9.07□□□□□ -0.96
COPB1-201ENST00000249923 ZNF417Q8TAU3 575 aa9.07□□□□□ -0.96
COPB1-201ENST00000249923 THAP6Q8TBB0 222 aa9.07□□□□□ -0.96
COPB1-201ENST00000249923 RNF128Q8TEB7 428 aa9.07□□□□□ -0.96
COPB1-201ENST00000249923 ZNF75AQ96N20 296 aa9.07□□□□□ -0.96
COPB1-201ENST00000249923 PDE7BQ9NP56 450 aa9.07□□□□□ -0.96
COPB1-201ENST00000249923 VSX1Q9NZR4 365 aaPredicted RBP9.07□□□□□ -0.96
COPB1-201ENST00000249923 LRP12Q9Y561 859 aa9.07□□□□□ -0.96
COPB1-201ENST00000249923 KCNMB2Q9Y691 235 aa9.07□□□□□ -0.96
COPB1-201ENST00000249923 TRAV36DV7A0A075B6V5 113 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 IGHV3-20A0A0C4DH32 117 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 FTCDNL1E5RQL4 147 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 IL5P05113 134 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 CTRB1P17538 263 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 FAUP35544 74 aaKnown RBP9.06□□□□□ -0.96
COPB1-201ENST00000249923 OR1D5P58170 312 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 ROM1Q03395 351 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 SGCBQ16585 318 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 CTRB2Q6GPI1 263 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 TMEM225Q6GV28 225 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 RNF144BQ7Z419 303 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 ZNF679Q8IYX0 411 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 GALNT16Q8N428 558 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 LHFPL5Q8TAF8 219 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 MRGPRFQ96AM1 343 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 FAM3DQ96BQ1 224 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 CRB3Q9BUF7 120 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 ABHD6Q9BV23 337 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 HRH4Q9H3N8 390 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 UCK1Q9HA47 277 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 C12orf10Q9HB07 376 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 TAS2R4Q9NYW5 299 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 CGGBP1Q9UFW8 167 aaPredicted RBP9.06□□□□□ -0.96
COPB1-201ENST00000249923 SPENQ96T58 3664 aaKnown RBP9.06□□□□□ -0.96
COPB1-201ENST00000249923 ARPC4-TTLL3A0A0A6YYG9 625 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 A0A1W2PPC1 479 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 OR6C65A6NJZ3 312 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 HOXD4P09016 255 aaPredicted RBP9.06□□□□□ -0.96
COPB1-201ENST00000249923 CD37P11049 281 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 ZNF28P17035 718 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 GNALP38405 381 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 BLKP51451 505 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 RPL27P61353 136 aaKnown RBP9.06□□□□□ -0.96
COPB1-201ENST00000249923 MRPS10P82664 201 aaKnown RBP9.06□□□□□ -0.96
COPB1-201ENST00000249923 HLXQ14774 488 aaPredicted RBP9.06□□□□□ -0.96
COPB1-201ENST00000249923 ZNF227Q86WZ6 799 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 CATSPERDQ86XM0 798 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 OR10R2Q8NGX6 335 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 MRPL48Q96GC5 212 aaKnown RBP9.06□□□□□ -0.96
COPB1-201ENST00000249923 ARL5BQ96KC2 179 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 ZNF587Q96SQ5 575 aaPredicted RBP9.06□□□□□ -0.96
COPB1-201ENST00000249923 CMKLR1Q99788 373 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 VN1R1Q9GZP7 353 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 PRMT8Q9NR22 394 aaPredicted RBP9.06□□□□□ -0.96
COPB1-201ENST00000249923 SLC22A11Q9NSA0 550 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 CTSFQ9UBX1 484 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 ZNF230Q9UIE0 474 aaPredicted RBP9.06□□□□□ -0.96
COPB1-201ENST00000249923 TRAV20A0A0B4J274 112 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.06□□□□□ -0.96
COPB1-201ENST00000249923 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.06□□□□□ -0.96
COPB1-201ENST00000249923 SNRPGP15A8MWD9 76 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 SLC17A2O00624 439 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 PLPP3O14495 311 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 SGCEO43556 437 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 TMEM127O75204 238 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 ALOX12BO75342 701 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 RENP00797 406 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 DCNP07585 359 aaKnown RBP9.06□□□□□ -0.96
COPB1-201ENST00000249923 SPARCP09486 303 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 RASGEF1BQ0VAM2 473 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 LY6G6FQ5SQ64 297 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 C1orf189Q5VU69 101 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 OR6N1Q8NGY5 312 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 PNPLA2Q96AD5 504 aa9.06□□□□□ -0.96
COPB1-201ENST00000249923 TMEM200CA6NKL6 621 aa9.05□□□□□ -0.96
COPB1-201ENST00000249923 LDLRAD4O15165 306 aa9.05□□□□□ -0.96
COPB1-201ENST00000249923 CDC40O60508 579 aaKnown RBP eCLIP9.05□□□□□ -0.96
COPB1-201ENST00000249923 CXCR1P25024 350 aa9.05□□□□□ -0.96
COPB1-201ENST00000249923 RBMS2Q15434 407 aaKnown RBP9.05□□□□□ -0.96
COPB1-201ENST00000249923 ELAVL1Q15717 326 aaKnown RBP9.05□□□□□ -0.96
COPB1-201ENST00000249923 ARHGAP40Q5TG30 622 aa9.05□□□□□ -0.96
COPB1-201ENST00000249923 CORO6Q6QEF8 472 aa9.05□□□□□ -0.96
COPB1-201ENST00000249923 TSSK4Q6SA08 328 aa9.05□□□□□ -0.96
COPB1-201ENST00000249923 NANPQ8TBE9 248 aa9.05□□□□□ -0.96
COPB1-201ENST00000249923 GPX8Q8TED1 209 aa9.05□□□□□ -0.96
COPB1-201ENST00000249923 METTL21AQ8WXB1 218 aa9.05□□□□□ -0.96
COPB1-201ENST00000249923 SEH1LQ96EE3 360 aa9.05□□□□□ -0.96
COPB1-201ENST00000249923 MRI1Q9BV20 369 aa9.05□□□□□ -0.96
COPB1-201ENST00000249923 COMMD4Q9H0A8 199 aa9.05□□□□□ -0.96
COPB1-201ENST00000249923 G6PC2Q9NQR9 355 aa9.05□□□□□ -0.96
COPB1-201ENST00000249923 MSRAQ9UJ68 235 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms