RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 PSMB9P28065 219 aa11.34□□□□□ -0.59
LSM8-201ENST00000249299 CCR9P51686 369 aa11.34□□□□□ -0.59
LSM8-201ENST00000249299 HCCSP53701 268 aa11.34□□□□□ -0.59
LSM8-201ENST00000249299 GP2P55259 537 aaKnown RBP11.34□□□□□ -0.59
LSM8-201ENST00000249299 OR12D2P58182 307 aa11.34□□□□□ -0.59
LSM8-201ENST00000249299 PRR20EP86478 221 aa11.34□□□□□ -0.59
LSM8-201ENST00000249299 PRR20CP86479 221 aa11.34□□□□□ -0.59
LSM8-201ENST00000249299 PRR20DP86480 221 aa11.34□□□□□ -0.59
LSM8-201ENST00000249299 PRR20BP86481 221 aa11.34□□□□□ -0.59
LSM8-201ENST00000249299 PRR20AP86496 221 aa11.34□□□□□ -0.59
LSM8-201ENST00000249299 RAB35Q15286 201 aa11.34□□□□□ -0.59
LSM8-201ENST00000249299 LIPNQ5VXI9 398 aa11.34□□□□□ -0.59
LSM8-201ENST00000249299 GDPGP1Q6ZNW5 385 aa11.34□□□□□ -0.59
LSM8-201ENST00000249299 KRT77Q7Z794 578 aa11.34□□□□□ -0.59
LSM8-201ENST00000249299 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.34□□□□□ -0.59
LSM8-201ENST00000249299 RPRMLQ8N4K4 120 aa11.34□□□□□ -0.59
LSM8-201ENST00000249299 ZNF433Q8N7K0 673 aaPredicted RBP11.34□□□□□ -0.59
LSM8-201ENST00000249299 FAM169BQ8N8A8 192 aa11.34□□□□□ -0.59
LSM8-201ENST00000249299 ZNF420Q8TAQ5 688 aaPredicted RBP11.34□□□□□ -0.59
LSM8-201ENST00000249299 GATAD2BQ8WXI9 593 aa11.34□□□□□ -0.59
LSM8-201ENST00000249299 UFD1Q92890 307 aa11.34□□□□□ -0.59
LSM8-201ENST00000249299 PELI1Q96FA3 418 aa11.34□□□□□ -0.59
LSM8-201ENST00000249299 MAP6Q96JE9 813 aa11.34□□□□□ -0.59
LSM8-201ENST00000249299 FOXN4Q96NZ1 517 aa11.34□□□□□ -0.59
LSM8-201ENST00000249299 OPALINQ96PE5 141 aa11.34□□□□□ -0.59
LSM8-201ENST00000249299 EMC7Q9NPA0 242 aa11.34□□□□□ -0.59
LSM8-201ENST00000249299 KLHDC2Q9Y2U9 406 aa11.34□□□□□ -0.59
LSM8-201ENST00000249299 A0A0G2JNJ9 132 aa11.33□□□□□ -0.6
LSM8-201ENST00000249299 A6NHS1 94 aa11.33□□□□□ -0.6
LSM8-201ENST00000249299 EIF4E1BA6NMX2 242 aaKnown RBP11.33□□□□□ -0.6
LSM8-201ENST00000249299 MMP7P09237 267 aaPredicted RBP11.33□□□□□ -0.6
LSM8-201ENST00000249299 H2BFMP0C1H6 154 aa11.33□□□□□ -0.6
LSM8-201ENST00000249299 B4GALT1P15291 398 aa11.33□□□□□ -0.6
LSM8-201ENST00000249299 IGHV1-2P23083 117 aa11.33□□□□□ -0.6
LSM8-201ENST00000249299 OTX1P32242 354 aaPredicted RBP11.33□□□□□ -0.6
LSM8-201ENST00000249299 RGS6P49758 472 aa11.33□□□□□ -0.6
LSM8-201ENST00000249299 ZNF829Q3KNS6 432 aaPredicted RBP11.33□□□□□ -0.6
LSM8-201ENST00000249299 SLC25A35Q3KQZ1 300 aa11.33□□□□□ -0.6
LSM8-201ENST00000249299 ELFN2Q5R3F8 820 aa11.33□□□□□ -0.6
LSM8-201ENST00000249299 SFRP5Q5T4F7 317 aa11.33□□□□□ -0.6
LSM8-201ENST00000249299 DMKNQ6E0U4 476 aaPredicted RBP11.33□□□□□ -0.6
LSM8-201ENST00000249299 TMEM53Q6P2H8 277 aa11.33□□□□□ -0.6
LSM8-201ENST00000249299 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.33□□□□□ -0.6
LSM8-201ENST00000249299 SKA3Q8IX90 412 aa11.33□□□□□ -0.6
LSM8-201ENST00000249299 MS4A15Q8N5U1 240 aa11.33□□□□□ -0.6
LSM8-201ENST00000249299 ZNF610Q8N9Z0 462 aa11.33□□□□□ -0.6
LSM8-201ENST00000249299 ASB5Q8WWX0 329 aa11.33□□□□□ -0.6
LSM8-201ENST00000249299 FBXO17Q96EF6 278 aa11.33□□□□□ -0.6
LSM8-201ENST00000249299 MOB1AQ9H8S9 216 aa11.33□□□□□ -0.6
LSM8-201ENST00000249299 SP140LQ9H930 580 aa11.33□□□□□ -0.6
LSM8-201ENST00000249299 ISG20L2Q9H9L3 353 aaKnown RBP11.33□□□□□ -0.6
LSM8-201ENST00000249299 ELOVL3Q9HB03 270 aa11.33□□□□□ -0.6
LSM8-201ENST00000249299 PNRC2Q9NPJ4 139 aaKnown RBP11.33□□□□□ -0.6
LSM8-201ENST00000249299 SLCO1C1Q9NYB5 712 aa11.33□□□□□ -0.6
LSM8-201ENST00000249299 Q9UFV3 132 aa11.33□□□□□ -0.6
LSM8-201ENST00000249299 GNG8Q9UK08 70 aa11.33□□□□□ -0.6
LSM8-201ENST00000249299 IKZF2Q9UKS7 526 aa11.33□□□□□ -0.6
LSM8-201ENST00000249299 CACNA1BQ00975 2339 aa11.32□□□□□ -0.6
LSM8-201ENST00000249299 NBEAQ8NFP9 2946 aa11.32□□□□□ -0.6
LSM8-201ENST00000249299 CIB4A0PJX0 185 aa11.32□□□□□ -0.6
LSM8-201ENST00000249299 OR6C6A6NF89 314 aa11.32□□□□□ -0.6
LSM8-201ENST00000249299 B8ZZF3 427 aa11.32□□□□□ -0.6
LSM8-201ENST00000249299 RER1O15258 196 aa11.32□□□□□ -0.6
LSM8-201ENST00000249299 SGCEO43556 437 aa11.32□□□□□ -0.6
LSM8-201ENST00000249299 HSMCR30P0CW71 290 aa11.32□□□□□ -0.6
LSM8-201ENST00000249299 PSKH1P11801 424 aa11.32□□□□□ -0.6
LSM8-201ENST00000249299 CHRNB4P30926 498 aa11.32□□□□□ -0.6
LSM8-201ENST00000249299 RPS27P42677 84 aaKnown RBP11.32□□□□□ -0.6
LSM8-201ENST00000249299 TMBIM6P55061 237 aa11.32□□□□□ -0.6
LSM8-201ENST00000249299 CDK5R1Q15078 307 aa11.32□□□□□ -0.6
LSM8-201ENST00000249299 GABRA6Q16445 453 aa11.32□□□□□ -0.6
LSM8-201ENST00000249299 KRTAP27-1Q3LI81 207 aa11.32□□□□□ -0.6
LSM8-201ENST00000249299 C3orf36Q3SXR2 165 aa11.32□□□□□ -0.6
LSM8-201ENST00000249299 TBRG1Q3YBR2 411 aa11.32□□□□□ -0.6
LSM8-201ENST00000249299 FBXL19-AS1Q494R0 122 aa11.32□□□□□ -0.6
LSM8-201ENST00000249299 KLHL24Q6TFL4 600 aa11.32□□□□□ -0.6
LSM8-201ENST00000249299 C3P1Q6ZMU1 363 aa11.32□□□□□ -0.6
LSM8-201ENST00000249299 CFAP77Q6ZQR2 320 aa11.32□□□□□ -0.6
LSM8-201ENST00000249299 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.32□□□□□ -0.6
LSM8-201ENST00000249299 ANKRD13BQ86YJ7 626 aa11.32□□□□□ -0.6
LSM8-201ENST00000249299 KLBQ86Z14 1044 aa11.32□□□□□ -0.6
LSM8-201ENST00000249299 LINC00346Q8IVM7 164 aa11.32□□□□□ -0.6
LSM8-201ENST00000249299 PHC2Q8IXK0 858 aa11.32□□□□□ -0.6
LSM8-201ENST00000249299 LRRC18Q8N456 261 aa11.32□□□□□ -0.6
LSM8-201ENST00000249299 RFLNBQ8N5W9 214 aa11.32□□□□□ -0.6
LSM8-201ENST00000249299 YIPF7Q8N8F6 280 aa11.32□□□□□ -0.6
LSM8-201ENST00000249299 STEAP2Q8NFT2 490 aa11.32□□□□□ -0.6
LSM8-201ENST00000249299 SMAP2Q8WU79 429 aaPredicted RBP11.32□□□□□ -0.6
LSM8-201ENST00000249299 THRSPQ92748 146 aa11.32□□□□□ -0.6
LSM8-201ENST00000249299 SPTSSAQ969W0 71 aa11.32□□□□□ -0.6
LSM8-201ENST00000249299 DGCR14Q96DF8 476 aaKnown RBP11.32□□□□□ -0.6
LSM8-201ENST00000249299 SMIM19Q96E16 107 aa11.32□□□□□ -0.6
LSM8-201ENST00000249299 YIPF6Q96EC8 236 aa11.32□□□□□ -0.6
LSM8-201ENST00000249299 DCLRE1CQ96SD1 692 aaKnown RBP11.32□□□□□ -0.6
LSM8-201ENST00000249299 AMELYQ99218 206 aa11.32□□□□□ -0.6
LSM8-201ENST00000249299 KCNJ15Q99712 375 aa11.32□□□□□ -0.6
LSM8-201ENST00000249299 ATF6BQ99941 703 aa11.32□□□□□ -0.6
LSM8-201ENST00000249299 SH3GL3Q99963 347 aa11.32□□□□□ -0.6
LSM8-201ENST00000249299 OR2H1Q9GZK4 316 aa11.32□□□□□ -0.6
LSM8-201ENST00000249299 NDUFB11Q9NX14 153 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms