RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 RTTNQ86VV8 2226 aa20.88■□□□□ 0.93
SDF2L1-201ENST00000248958 FLNAP21333 2647 aaKnown RBP20.88■□□□□ 0.93
SDF2L1-201ENST00000248958 OR6C6A6NF89 314 aa20.88■□□□□ 0.93
SDF2L1-201ENST00000248958 RNF223E7ERA6 249 aa20.88■□□□□ 0.93
SDF2L1-201ENST00000248958 J3QW42 95 aa20.88■□□□□ 0.93
SDF2L1-201ENST00000248958 ABHD16AO95870 558 aa20.88■□□□□ 0.93
SDF2L1-201ENST00000248958 GPANK1O95872 356 aa20.88■□□□□ 0.93
SDF2L1-201ENST00000248958 TFP02787 698 aa20.88■□□□□ 0.93
SDF2L1-201ENST00000248958 FASP25445 335 aa20.88■□□□□ 0.93
SDF2L1-201ENST00000248958 ERVS71-1P61550 626 aa20.88■□□□□ 0.93
SDF2L1-201ENST00000248958 CRMP1Q14194 572 aa20.88■□□□□ 0.93
SDF2L1-201ENST00000248958 ATP6AP1Q15904 470 aa20.88■□□□□ 0.93
SDF2L1-201ENST00000248958 MEP1BQ16820 701 aa20.88■□□□□ 0.93
SDF2L1-201ENST00000248958 HIPK1Q86Z02 1210 aa20.88■□□□□ 0.93
SDF2L1-201ENST00000248958 HS3ST5Q8IZT8 346 aa20.88■□□□□ 0.93
SDF2L1-201ENST00000248958 ABHD4Q8TB40 342 aa20.88■□□□□ 0.93
SDF2L1-201ENST00000248958 C10orf105Q8TEF2 133 aa20.88■□□□□ 0.93
SDF2L1-201ENST00000248958 SNX33Q8WV41 574 aa20.88■□□□□ 0.93
SDF2L1-201ENST00000248958 COQ7Q99807 217 aa20.88■□□□□ 0.93
SDF2L1-201ENST00000248958 TEX12Q9BXU0 123 aa20.88■□□□□ 0.93
SDF2L1-201ENST00000248958 TAAR3PQ9P1P4 343 aa20.88■□□□□ 0.93
SDF2L1-201ENST00000248958 LHFPL6Q9Y693 200 aa20.88■□□□□ 0.93
SDF2L1-201ENST00000248958 LOC390937A0A1W2PQ73 354 aa20.87■□□□□ 0.93
SDF2L1-201ENST00000248958 RER1O15258 196 aa20.87■□□□□ 0.93
SDF2L1-201ENST00000248958 IGHV3-13P01766 116 aa20.87■□□□□ 0.93
SDF2L1-201ENST00000248958 MT-ND5P03915 603 aa20.87■□□□□ 0.93
SDF2L1-201ENST00000248958 PRKACGP22612 351 aa20.87■□□□□ 0.93
SDF2L1-201ENST00000248958 PPP1CBP62140 327 aa20.87■□□□□ 0.93
SDF2L1-201ENST00000248958 CCNIQ14094 377 aa20.87■□□□□ 0.93
SDF2L1-201ENST00000248958 NKPD1Q17RQ9 610 aa20.87■□□□□ 0.93
SDF2L1-201ENST00000248958 ELFN2Q5R3F8 820 aa20.87■□□□□ 0.93
SDF2L1-201ENST00000248958 MBNL2Q5VZF2 373 aaKnown RBP20.87■□□□□ 0.93
SDF2L1-201ENST00000248958 CLEC9AQ6UXN8 241 aa20.87■□□□□ 0.93
SDF2L1-201ENST00000248958 ZSCAN2Q7Z7L9 614 aaPredicted RBP20.87■□□□□ 0.93
SDF2L1-201ENST00000248958 SLC25A40Q8TBP6 338 aa20.87■□□□□ 0.93
SDF2L1-201ENST00000248958 MARS2Q96GW9 593 aaKnown RBP20.87■□□□□ 0.93
SDF2L1-201ENST00000248958 NMNAT2Q9BZQ4 307 aa20.87■□□□□ 0.93
SDF2L1-201ENST00000248958 KIF17Q9P2E2 1029 aa20.87■□□□□ 0.93
SDF2L1-201ENST00000248958 MYEF2Q9P2K5 600 aaKnown RBP20.87■□□□□ 0.93
SDF2L1-201ENST00000248958 ZFHX3Q15911 3703 aa20.87■□□□□ 0.93
SDF2L1-201ENST00000248958 MAP1AP78559 2803 aaPredicted RBP20.86■□□□□ 0.93
SDF2L1-201ENST00000248958 IGHV4-30-2A0A087WSY4 118 aa20.86■□□□□ 0.93
SDF2L1-201ENST00000248958 HMGN1P05114 100 aa20.86■□□□□ 0.93
SDF2L1-201ENST00000248958 POU1F1P28069 291 aa20.86■□□□□ 0.93
SDF2L1-201ENST00000248958 PYCR1P32322 319 aa20.86■□□□□ 0.93
SDF2L1-201ENST00000248958 ALDH3B1P43353 468 aa20.86■□□□□ 0.93
SDF2L1-201ENST00000248958 RGS6P49758 472 aa20.86■□□□□ 0.93
SDF2L1-201ENST00000248958 OTPQ5XKR4 325 aa20.86■□□□□ 0.93
SDF2L1-201ENST00000248958 SLC18B1Q6NT16 456 aa20.86■□□□□ 0.93
SDF2L1-201ENST00000248958 GSX1Q9H4S2 264 aaPredicted RBP20.86■□□□□ 0.93
SDF2L1-201ENST00000248958 MRPL22Q9NWU5 206 aaKnown RBP20.86■□□□□ 0.93
SDF2L1-201ENST00000248958 CGGBP1Q9UFW8 167 aaPredicted RBP20.86■□□□□ 0.93
SDF2L1-201ENST00000248958 CYB5R1Q9UHQ9 305 aa20.86■□□□□ 0.93
SDF2L1-201ENST00000248958 LY6HO94772 140 aa20.85■□□□□ 0.93
SDF2L1-201ENST00000248958 CLPTM1O96005 669 aa20.85■□□□□ 0.93
SDF2L1-201ENST00000248958 DAOP14920 347 aa20.85■□□□□ 0.93
SDF2L1-201ENST00000248958 PAICSP22234 425 aaKnown RBP20.85■□□□□ 0.93
SDF2L1-201ENST00000248958 FMO3P31513 532 aa20.85■□□□□ 0.93
SDF2L1-201ENST00000248958 GGT2P36268 569 aa20.85■□□□□ 0.93
SDF2L1-201ENST00000248958 LIPAP38571 399 aa20.85■□□□□ 0.93
SDF2L1-201ENST00000248958 CDK5Q00535 292 aa20.85■□□□□ 0.93
SDF2L1-201ENST00000248958 ECH1Q13011 328 aa20.85■□□□□ 0.93
SDF2L1-201ENST00000248958 GINS1Q14691 196 aa20.85■□□□□ 0.93
SDF2L1-201ENST00000248958 MAD2L1BPQ15013 274 aaPredicted RBP20.85■□□□□ 0.93
SDF2L1-201ENST00000248958 RFPL4BQ6ZWI9 263 aa20.85■□□□□ 0.93
SDF2L1-201ENST00000248958 ZCCHC24Q8N2G6 241 aaKnown RBP20.85■□□□□ 0.93
SDF2L1-201ENST00000248958 ZNF540Q8NDQ6 660 aa20.85■□□□□ 0.93
SDF2L1-201ENST00000248958 KLF14Q8TD94 323 aaPredicted RBP20.85■□□□□ 0.93
SDF2L1-201ENST00000248958 PIMREGQ9BSJ6 248 aa20.85■□□□□ 0.93
SDF2L1-201ENST00000248958 OR2J1Q9GZK6 312 aa20.85■□□□□ 0.93
SDF2L1-201ENST00000248958 TPK1Q9H3S4 243 aa20.85■□□□□ 0.93
SDF2L1-201ENST00000248958 PAPOLBQ9NRJ5 636 aaKnown RBP20.85■□□□□ 0.93
SDF2L1-201ENST00000248958 GRIP1Q9Y3R0 1128 aa20.85■□□□□ 0.93
SDF2L1-201ENST00000248958 G3V2T6 193 aa20.84■□□□□ 0.93
SDF2L1-201ENST00000248958 NGFP01138 241 aa20.84■□□□□ 0.93
SDF2L1-201ENST00000248958 HEXAP06865 529 aa20.84■□□□□ 0.93
SDF2L1-201ENST00000248958 SPI1P17947 270 aa20.84■□□□□ 0.93
SDF2L1-201ENST00000248958 PCGF3Q3KNV8 242 aa20.84■□□□□ 0.93
SDF2L1-201ENST00000248958 FAHD1Q6P587 224 aa20.84■□□□□ 0.93
SDF2L1-201ENST00000248958 CORO6Q6QEF8 472 aa20.84■□□□□ 0.93
SDF2L1-201ENST00000248958 LINC00346Q8IVM7 164 aa20.84■□□□□ 0.93
SDF2L1-201ENST00000248958 PARP8Q8N3A8 854 aa20.84■□□□□ 0.93
SDF2L1-201ENST00000248958 IQCF1Q8N6M8 205 aa20.84■□□□□ 0.93
SDF2L1-201ENST00000248958 OR9Q1Q8NGQ5 310 aa20.84■□□□□ 0.93
SDF2L1-201ENST00000248958 UBASH3BQ8TF42 649 aa20.84■□□□□ 0.93
SDF2L1-201ENST00000248958 SMR3AQ99954 134 aa20.84■□□□□ 0.93
SDF2L1-201ENST00000248958 HINT3Q9NQE9 182 aaKnown RBP20.84■□□□□ 0.93
SDF2L1-201ENST00000248958 CYSLTR2Q9NS75 346 aa20.84■□□□□ 0.93
SDF2L1-201ENST00000248958 ACANP16112 2415 aa20.84■□□□□ 0.93
SDF2L1-201ENST00000248958 C17orf100A8MU93 164 aa20.83■□□□□ 0.93
SDF2L1-201ENST00000248958 LOXL1Q08397 574 aaPredicted RBP20.83■□□□□ 0.93
SDF2L1-201ENST00000248958 ACSM5Q6NUN0 579 aa20.83■□□□□ 0.93
SDF2L1-201ENST00000248958 TMEM154Q6P9G4 183 aa20.83■□□□□ 0.93
SDF2L1-201ENST00000248958 ZDHHC13Q8IUH4 622 aa20.83■□□□□ 0.93
SDF2L1-201ENST00000248958 C10orf67Q8IYJ2 551 aa20.83■□□□□ 0.93
SDF2L1-201ENST00000248958 ZNF786Q8N393 782 aa20.83■□□□□ 0.93
SDF2L1-201ENST00000248958 OR5L1Q8NGL2 311 aa20.83■□□□□ 0.93
SDF2L1-201ENST00000248958 PITX2Q99697 317 aa20.83■□□□□ 0.93
SDF2L1-201ENST00000248958 ATF6BQ99941 703 aa20.83■□□□□ 0.93
SDF2L1-201ENST00000248958 SLC25A19Q9HC21 320 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms