RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 GPR160Q9UJ42 338 aa9.75□□□□□ -0.85
SF3B6-201ENST00000233468 FREM1Q5H8C1 2179 aa9.75□□□□□ -0.85
SF3B6-201ENST00000233468 RTTNQ86VV8 2226 aa9.75□□□□□ -0.85
SF3B6-201ENST00000233468 DSCAMO60469 2012 aa9.75□□□□□ -0.85
SF3B6-201ENST00000233468 OR6C6A6NF89 314 aa9.74□□□□□ -0.85
SF3B6-201ENST00000233468 DCTN6O00399 190 aa9.74□□□□□ -0.85
SF3B6-201ENST00000233468 SURF4O15260 269 aa9.74□□□□□ -0.85
SF3B6-201ENST00000233468 PRODHO43272 600 aa9.74□□□□□ -0.85
SF3B6-201ENST00000233468 MPZL1O95297 269 aa9.74□□□□□ -0.85
SF3B6-201ENST00000233468 SOD3P08294 240 aa9.74□□□□□ -0.85
SF3B6-201ENST00000233468 OR4A8P0C604 315 aa9.74□□□□□ -0.85
SF3B6-201ENST00000233468 GAAP10253 952 aa9.74□□□□□ -0.85
SF3B6-201ENST00000233468 SPI1P17947 270 aa9.74□□□□□ -0.85
SF3B6-201ENST00000233468 APEX1P27695 318 aaKnown RBP9.74□□□□□ -0.85
SF3B6-201ENST00000233468 HTR5AP47898 357 aa9.74□□□□□ -0.85
SF3B6-201ENST00000233468 EVX1P49640 407 aa9.74□□□□□ -0.85
SF3B6-201ENST00000233468 ALDH3A2P51648 485 aa9.74□□□□□ -0.85
SF3B6-201ENST00000233468 UCP2P55851 309 aa9.74□□□□□ -0.85
SF3B6-201ENST00000233468 NKX6-1P78426 367 aaPredicted RBP9.74□□□□□ -0.85
SF3B6-201ENST00000233468 HGFACQ04756 655 aa9.74□□□□□ -0.85
SF3B6-201ENST00000233468 RAB35Q15286 201 aa9.74□□□□□ -0.85
SF3B6-201ENST00000233468 EFNB3Q15768 340 aa9.74□□□□□ -0.85
SF3B6-201ENST00000233468 SLC35D3Q5M8T2 416 aa9.74□□□□□ -0.85
SF3B6-201ENST00000233468 ZNF362Q5T0B9 420 aaPredicted RBP9.74□□□□□ -0.85
SF3B6-201ENST00000233468 SHEQ5VZ18 495 aa9.74□□□□□ -0.85
SF3B6-201ENST00000233468 RGS7BPQ6MZT1 257 aaPredicted RBP9.74□□□□□ -0.85
SF3B6-201ENST00000233468 ACSM5Q6NUN0 579 aa9.74□□□□□ -0.85
SF3B6-201ENST00000233468 UGT2A3Q6UWM9 527 aa9.74□□□□□ -0.85
SF3B6-201ENST00000233468 B3GLCTQ6Y288 498 aa9.74□□□□□ -0.85
SF3B6-201ENST00000233468 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.74□□□□□ -0.85
SF3B6-201ENST00000233468 MYPOPQ86VE0 399 aaPredicted RBP9.74□□□□□ -0.85
SF3B6-201ENST00000233468 ZNF584Q8IVC4 421 aa9.74□□□□□ -0.85
SF3B6-201ENST00000233468 PQLC1Q8N2U9 271 aa9.74□□□□□ -0.85
SF3B6-201ENST00000233468 CIARTQ8N365 385 aaPredicted RBP9.74□□□□□ -0.85
SF3B6-201ENST00000233468 CPEB3Q8NE35 698 aaKnown RBP9.74□□□□□ -0.85
SF3B6-201ENST00000233468 OR9Q1Q8NGQ5 310 aa9.74□□□□□ -0.85
SF3B6-201ENST00000233468 OR6K6Q8NGW6 343 aa9.74□□□□□ -0.85
SF3B6-201ENST00000233468 AKR7LQ8NHP1 331 aa9.74□□□□□ -0.85
SF3B6-201ENST00000233468 C18orf12Q96KH6 178 aa9.74□□□□□ -0.85
SF3B6-201ENST00000233468 FOXN4Q96NZ1 517 aa9.74□□□□□ -0.85
SF3B6-201ENST00000233468 GSX2Q9BZM3 304 aa9.74□□□□□ -0.85
SF3B6-201ENST00000233468 NMNAT2Q9BZQ4 307 aa9.74□□□□□ -0.85
SF3B6-201ENST00000233468 HDHD2Q9H0R4 259 aa9.74□□□□□ -0.85
SF3B6-201ENST00000233468 WNT5BQ9H1J7 359 aa9.74□□□□□ -0.85
SF3B6-201ENST00000233468 PLK3Q9H4B4 646 aa9.74□□□□□ -0.85
SF3B6-201ENST00000233468 ZNF701Q9NV72 531 aaPredicted RBP9.74□□□□□ -0.85
SF3B6-201ENST00000233468 TVP23BQ9NYZ1 205 aa9.74□□□□□ -0.85
SF3B6-201ENST00000233468 USE1Q9NZ43 259 aa9.74□□□□□ -0.85
SF3B6-201ENST00000233468 H2AFY2Q9P0M6 372 aaPredicted RBP9.74□□□□□ -0.85
SF3B6-201ENST00000233468 PRR14LQ5THK1 2151 aa9.74□□□□□ -0.85
SF3B6-201ENST00000233468 ROS1P08922 2347 aa9.73□□□□□ -0.85
SF3B6-201ENST00000233468 FAM171A2A8MVW0 826 aa9.73□□□□□ -0.85
SF3B6-201ENST00000233468 H3BSA7 217 aa9.73□□□□□ -0.85
SF3B6-201ENST00000233468 J3QW42 95 aa9.73□□□□□ -0.85
SF3B6-201ENST00000233468 GLCEO94923 617 aa9.73□□□□□ -0.85
SF3B6-201ENST00000233468 TFP02787 698 aa9.73□□□□□ -0.85
SF3B6-201ENST00000233468 SCG5P05408 212 aa9.73□□□□□ -0.85
SF3B6-201ENST00000233468 LCKP06239 509 aa9.73□□□□□ -0.85
SF3B6-201ENST00000233468 INHBBP09529 407 aa9.73□□□□□ -0.85
SF3B6-201ENST00000233468 GSTT1P30711 240 aa9.73□□□□□ -0.85
SF3B6-201ENST00000233468 PYCR1P32322 319 aa9.73□□□□□ -0.85
SF3B6-201ENST00000233468 THBS4P35443 961 aa9.73□□□□□ -0.85
SF3B6-201ENST00000233468 RGS6P49758 472 aa9.73□□□□□ -0.85
SF3B6-201ENST00000233468 ENTPD1P49961 510 aa9.73□□□□□ -0.85
SF3B6-201ENST00000233468 ATP5J2P56134 94 aa9.73□□□□□ -0.85
SF3B6-201ENST00000233468 CDC42P60953 191 aa9.73□□□□□ -0.85
SF3B6-201ENST00000233468 RPS7P62081 194 aaKnown RBP9.73□□□□□ -0.85
SF3B6-201ENST00000233468 PPP2R2BQ00005 443 aa9.73□□□□□ -0.85
SF3B6-201ENST00000233468 TEX30Q5JUR7 227 aa9.73□□□□□ -0.85
SF3B6-201ENST00000233468 ELFN2Q5R3F8 820 aa9.73□□□□□ -0.85
SF3B6-201ENST00000233468 LCN1P1Q5VSP4 162 aa9.73□□□□□ -0.85
SF3B6-201ENST00000233468 ZNF774Q6NX45 483 aa9.73□□□□□ -0.85
SF3B6-201ENST00000233468 PRSS57Q6UWY2 283 aa9.73□□□□□ -0.85
SF3B6-201ENST00000233468 ZBTB49Q6ZSB9 765 aa9.73□□□□□ -0.85
SF3B6-201ENST00000233468 CXXC5Q7LFL8 322 aaKnown RBP9.73□□□□□ -0.85
SF3B6-201ENST00000233468 SHFQ7M4L6 423 aa9.73□□□□□ -0.85
SF3B6-201ENST00000233468 BIVMQ86UB2 503 aa9.73□□□□□ -0.85
SF3B6-201ENST00000233468 OR5L1Q8NGL2 311 aa9.73□□□□□ -0.85
SF3B6-201ENST00000233468 OR1F12Q8NHA8 337 aa9.73□□□□□ -0.85
SF3B6-201ENST00000233468 EME1Q96AY2 570 aa9.73□□□□□ -0.85
SF3B6-201ENST00000233468 POM121L2Q96KW2 1035 aa9.73□□□□□ -0.85
SF3B6-201ENST00000233468 C4orf45Q96LM5 186 aa9.73□□□□□ -0.85
SF3B6-201ENST00000233468 PITX2Q99697 317 aa9.73□□□□□ -0.85
SF3B6-201ENST00000233468 COQ7Q99807 217 aa9.73□□□□□ -0.85
SF3B6-201ENST00000233468 CIB1Q99828 191 aa9.73□□□□□ -0.85
SF3B6-201ENST00000233468 GABARAPL3Q9BY60 117 aa9.73□□□□□ -0.85
SF3B6-201ENST00000233468 OR51V1Q9H2C8 321 aa9.73□□□□□ -0.85
SF3B6-201ENST00000233468 C8orf4Q9NR00 106 aa9.73□□□□□ -0.85
SF3B6-201ENST00000233468 SLCO1C1Q9NYB5 712 aa9.73□□□□□ -0.85
SF3B6-201ENST00000233468 CYB5R1Q9UHQ9 305 aa9.73□□□□□ -0.85
SF3B6-201ENST00000233468 FBN1P35555 2871 aaKnown RBP9.73□□□□□ -0.85
SF3B6-201ENST00000233468 CSPG4Q6UVK1 2322 aa9.72□□□□□ -0.85
SF3B6-201ENST00000233468 ZAR1LA6NP61 321 aa9.72□□□□□ -0.85
SF3B6-201ENST00000233468 H7C417 338 aa9.72□□□□□ -0.85
SF3B6-201ENST00000233468 OVOL3O00110 214 aa9.72□□□□□ -0.85
SF3B6-201ENST00000233468 ZNF593O00488 134 aaPredicted RBP9.72□□□□□ -0.85
SF3B6-201ENST00000233468 RER1O15258 196 aa9.72□□□□□ -0.85
SF3B6-201ENST00000233468 ICMTO60725 284 aa9.72□□□□□ -0.85
SF3B6-201ENST00000233468 MITFO75030 526 aaPredicted RBP9.72□□□□□ -0.85
SF3B6-201ENST00000233468 ABHD16AO95870 558 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms