RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 Q6ZNB5 142 aa7.55□□□□□ -1.2
SPARC-201ENST00000231061 TMPRSS11BQ86T26 416 aa7.55□□□□□ -1.2
SPARC-201ENST00000231061 LGI4Q8N135 537 aa7.55□□□□□ -1.2
SPARC-201ENST00000231061 OR10G2Q8NGC3 310 aa7.55□□□□□ -1.2
SPARC-201ENST00000231061 OR5AK3PQ8NH89 298 aa7.55□□□□□ -1.2
SPARC-201ENST00000231061 PIK3IP1Q96FE7 263 aa7.55□□□□□ -1.2
SPARC-201ENST00000231061 MS4A4EQ96PG1 132 aa7.55□□□□□ -1.2
SPARC-201ENST00000231061 FEVQ99581 238 aa7.55□□□□□ -1.2
SPARC-201ENST00000231061 RASL12Q9NYN1 266 aa7.55□□□□□ -1.2
SPARC-201ENST00000231061 OR2A25A4D2G3 310 aa7.55□□□□□ -1.2
SPARC-201ENST00000231061 TMEM202A6NGA9 273 aa7.55□□□□□ -1.2
SPARC-201ENST00000231061 OR2C1O95371 312 aa7.55□□□□□ -1.2
SPARC-201ENST00000231061 F12P00748 615 aaPredicted RBP7.55□□□□□ -1.2
SPARC-201ENST00000231061 INHAP05111 366 aa7.55□□□□□ -1.2
SPARC-201ENST00000231061 NMBP08949 121 aa7.55□□□□□ -1.2
SPARC-201ENST00000231061 GADD45AP24522 165 aa7.55□□□□□ -1.2
SPARC-201ENST00000231061 GNRHRP30968 328 aa7.55□□□□□ -1.2
SPARC-201ENST00000231061 RFX2P48378 723 aa7.55□□□□□ -1.2
SPARC-201ENST00000231061 NDUFA6P56556 154 aa7.55□□□□□ -1.2
SPARC-201ENST00000231061 CRYZQ08257 329 aaKnown RBP7.55□□□□□ -1.2
SPARC-201ENST00000231061 C3orf36Q3SXR2 165 aa7.55□□□□□ -1.2
SPARC-201ENST00000231061 LHX8Q68G74 356 aa7.55□□□□□ -1.2
SPARC-201ENST00000231061 TMEM182Q6ZP80 229 aaPredicted RBP7.55□□□□□ -1.2
SPARC-201ENST00000231061 Q6ZVL8 140 aa7.55□□□□□ -1.2
SPARC-201ENST00000231061 OTOP2Q7RTS6 562 aa7.55□□□□□ -1.2
SPARC-201ENST00000231061 GDF7Q7Z4P5 450 aa7.55□□□□□ -1.2
SPARC-201ENST00000231061 ZNF605Q86T29 641 aa7.55□□□□□ -1.2
SPARC-201ENST00000231061 LRP11Q86VZ4 500 aa7.55□□□□□ -1.2
SPARC-201ENST00000231061 SPRTNQ9H040 489 aaPredicted RBP7.55□□□□□ -1.2
SPARC-201ENST00000231061 SIRPDQ9H106 197 aa7.55□□□□□ -1.2
SPARC-201ENST00000231061 RNF121Q9H920 327 aa7.55□□□□□ -1.2
SPARC-201ENST00000231061 MSL2Q9HCI7 577 aa7.55□□□□□ -1.2
SPARC-201ENST00000231061 PILRBQ9UKJ0 227 aa7.55□□□□□ -1.2
SPARC-201ENST00000231061 ACSL6Q9UKU0 697 aa7.55□□□□□ -1.2
SPARC-201ENST00000231061 ATG4BQ9Y4P1 393 aa7.55□□□□□ -1.2
SPARC-201ENST00000231061 A0A1W2PRU2 124 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 MYL12BO14950 172 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 PCDH7O60245 1069 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 ACTL6BO94805 426 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 ETHE1O95571 254 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 CATP04040 527 aaKnown RBP7.54□□□□□ -1.2
SPARC-201ENST00000231061 MYL12AP19105 171 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 PRPH2P23942 346 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 NFYBP25208 207 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 SLC6A1P30531 599 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 CHI3L1P36222 383 aaPredicted RBP7.54□□□□□ -1.2
SPARC-201ENST00000231061 RPL4P36578 427 aaKnown RBP7.54□□□□□ -1.2
SPARC-201ENST00000231061 CTSKP43235 329 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 EPHA4P54764 986 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 CLDN18P56856 261 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 RAB25P57735 213 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 RPS13P62277 151 aaKnown RBP7.54□□□□□ -1.2
SPARC-201ENST00000231061 MESP2Q0VG99 397 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 PRSS36Q5K4E3 855 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 NSUN5P2Q63ZY6 315 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 TMEM71Q6P5X7 295 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 SLC5A8Q8N695 610 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 LILRA3Q8N6C8 439 aaPredicted RBP7.54□□□□□ -1.2
SPARC-201ENST00000231061 TAAR8Q969N4 342 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 CHRDL1Q9BU40 450 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 WRAP53Q9BUR4 548 aaKnown RBP7.54□□□□□ -1.2
SPARC-201ENST00000231061 RBM24Q9BX46 236 aaKnown RBP7.54□□□□□ -1.2
SPARC-201ENST00000231061 TPSD1Q9BZJ3 242 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 LIPGQ9Y5X9 500 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 PLXNA4Q9HCM2 1894 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 TRDCB7Z8K6 153 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 SLC16A5O15375 505 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 AKR1C4P17516 323 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 PMCHP20382 165 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 ANOS1P23352 680 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 RPS16P62249 146 aaKnown RBP7.54□□□□□ -1.2
SPARC-201ENST00000231061 HSF1Q00613 529 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 RGNQ15493 299 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 WDR74Q6RFH5 385 aaPredicted RBP7.54□□□□□ -1.2
SPARC-201ENST00000231061 TMEM205Q6UW68 189 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 OR1K1Q8NGR3 316 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 OR4K15Q8NH41 348 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 NFKBIDQ8NI38 313 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 RNASEH2CQ8TDP1 164 aaKnown RBP7.54□□□□□ -1.2
SPARC-201ENST00000231061 DNASE2BQ8WZ79 361 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 ZNF75AQ96N20 296 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 CNOT2Q9NZN8 540 aaKnown RBP7.54□□□□□ -1.2
SPARC-201ENST00000231061 AMDHD2Q9Y303 409 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 HTTP42858 3142 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 A0A1B0GUS0 222 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 BCAT2O15382 392 aaPredicted RBP7.54□□□□□ -1.2
SPARC-201ENST00000231061 PPIBP23284 216 aaKnown RBP7.54□□□□□ -1.2
SPARC-201ENST00000231061 AKR1C2P52895 323 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 HERPUD1Q15011 391 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 CEACAM21Q3KPI0 293 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.54□□□□□ -1.2
SPARC-201ENST00000231061 FAHD1Q6P587 224 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 HSD11B1LQ7Z5J1 315 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 GTPBP8Q8N3Z3 284 aaPredicted RBP7.54□□□□□ -1.2
SPARC-201ENST00000231061 Q8N402 240 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 CADM4Q8NFZ8 388 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 LYSMD1Q96S90 227 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 DOHHQ9BU89 302 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 BARHL1Q9BZE3 327 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 SLIRPQ9GZT3 109 aaKnown RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms