RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 BAXQ07812 192 aa16.73■□□□□ 0.27
CLIP2-201ENST00000223398 STEAP1BQ6NZ63 245 aa16.73■□□□□ 0.27
CLIP2-201ENST00000223398 PRSS45Q7RTY3 260 aa16.73■□□□□ 0.27
CLIP2-201ENST00000223398 OR10J5Q8NHC4 309 aa16.73■□□□□ 0.27
CLIP2-201ENST00000223398 HEYLQ9NQ87 328 aaPredicted RBP16.73■□□□□ 0.27
CLIP2-201ENST00000223398 NECAP2Q9NVZ3 263 aa16.73■□□□□ 0.27
CLIP2-201ENST00000223398 MEIKINA0A087WXM9 373 aa16.73■□□□□ 0.27
CLIP2-201ENST00000223398 ZNF701M0R085 212 aaPredicted RBP16.73■□□□□ 0.27
CLIP2-201ENST00000223398 DHHO43323 396 aa16.73■□□□□ 0.27
CLIP2-201ENST00000223398 LIPAP38571 399 aa16.73■□□□□ 0.27
CLIP2-201ENST00000223398 EMC4Q5J8M3 183 aa16.73■□□□□ 0.27
CLIP2-201ENST00000223398 CA5BP1Q8WTZ4 195 aa16.73■□□□□ 0.27
CLIP2-201ENST00000223398 FRZBQ92765 325 aa16.73■□□□□ 0.27
CLIP2-201ENST00000223398 BHLHE40O14503 412 aa16.72■□□□□ 0.27
CLIP2-201ENST00000223398 TPT1P13693 172 aaKnown RBP16.72■□□□□ 0.27
CLIP2-201ENST00000223398 ZNF133P52736 654 aaPredicted RBP16.72■□□□□ 0.27
CLIP2-201ENST00000223398 TATDN3Q17R31 274 aa16.72■□□□□ 0.27
CLIP2-201ENST00000223398 OR2B11Q5JQS5 317 aa16.72■□□□□ 0.27
CLIP2-201ENST00000223398 TMEM217Q8N7C4 229 aa16.72■□□□□ 0.27
CLIP2-201ENST00000223398 OR10X1Q8NGY0 326 aa16.72■□□□□ 0.27
CLIP2-201ENST00000223398 PRRX2Q99811 253 aa16.72■□□□□ 0.27
CLIP2-201ENST00000223398 SLCO1B1Q9Y6L6 691 aa16.72■□□□□ 0.27
CLIP2-201ENST00000223398 CXorf51AA0A1B0GTR3 108 aa16.72■□□□□ 0.27
CLIP2-201ENST00000223398 ZNF254O75437 659 aa16.72■□□□□ 0.27
CLIP2-201ENST00000223398 ALDH3B1P43353 468 aa16.72■□□□□ 0.27
CLIP2-201ENST00000223398 COMMD7Q86VX2 200 aa16.72■□□□□ 0.27
CLIP2-201ENST00000223398 ARL11Q969Q4 196 aa16.72■□□□□ 0.27
CLIP2-201ENST00000223398 BCL2L10Q9HD36 194 aa16.72■□□□□ 0.27
CLIP2-201ENST00000223398 SLC22A13Q9Y226 551 aa16.72■□□□□ 0.27
CLIP2-201ENST00000223398 PPIL1Q9Y3C6 166 aa16.72■□□□□ 0.27
CLIP2-201ENST00000223398 HDGFL3Q9Y3E1 203 aa16.72■□□□□ 0.27
CLIP2-201ENST00000223398 SHROOM3Q8TF72 1996 aa16.72■□□□□ 0.27
CLIP2-201ENST00000223398 THSD7AQ9UPZ6 1657 aa16.72■□□□□ 0.27
CLIP2-201ENST00000223398 GLI4P10075 376 aa16.72■□□□□ 0.27
CLIP2-201ENST00000223398 NFYAP23511 347 aaPredicted RBP16.72■□□□□ 0.27
CLIP2-201ENST00000223398 SHBQ15464 509 aa16.72■□□□□ 0.27
CLIP2-201ENST00000223398 ATPAF1Q5TC12 328 aaPredicted RBP16.72■□□□□ 0.27
CLIP2-201ENST00000223398 EID2BQ96D98 161 aa16.72■□□□□ 0.27
CLIP2-201ENST00000223398 FAM210AQ96ND0 272 aa16.72■□□□□ 0.27
CLIP2-201ENST00000223398 SLC38A1Q9H2H9 487 aa16.72■□□□□ 0.27
CLIP2-201ENST00000223398 POLDIP2Q9Y2S7 368 aa16.72■□□□□ 0.27
CLIP2-201ENST00000223398 SH2D1BO14796 132 aa16.72■□□□□ 0.27
CLIP2-201ENST00000223398 SPRY3O43610 288 aa16.72■□□□□ 0.27
CLIP2-201ENST00000223398 HOXC8P31273 242 aa16.72■□□□□ 0.27
CLIP2-201ENST00000223398 SSPNQ14714 243 aa16.72■□□□□ 0.27
CLIP2-201ENST00000223398 LPCAT3Q6P1A2 487 aa16.72■□□□□ 0.27
CLIP2-201ENST00000223398 KTI12Q96EK9 354 aaPredicted RBP16.72■□□□□ 0.27
CLIP2-201ENST00000223398 S1PR5Q9H228 398 aa16.72■□□□□ 0.27
CLIP2-201ENST00000223398 OR6C6A6NF89 314 aa16.72■□□□□ 0.27
CLIP2-201ENST00000223398 NKX6-1P78426 367 aaPredicted RBP16.72■□□□□ 0.27
CLIP2-201ENST00000223398 ACSM1Q08AH1 577 aa16.72■□□□□ 0.27
CLIP2-201ENST00000223398 SSX9Q7RTT3 188 aa16.72■□□□□ 0.27
CLIP2-201ENST00000223398 ZNF546Q86UE3 836 aa16.72■□□□□ 0.27
CLIP2-201ENST00000223398 PTOV1Q86YD1 416 aa16.72■□□□□ 0.27
CLIP2-201ENST00000223398 ZNF683Q8IZ20 524 aa16.72■□□□□ 0.27
CLIP2-201ENST00000223398 OR1J1Q8NGS3 322 aa16.72■□□□□ 0.27
CLIP2-201ENST00000223398 CT55Q8WUE5 264 aa16.72■□□□□ 0.27
CLIP2-201ENST00000223398 UNKLQ9H9P5 680 aaKnown RBP16.72■□□□□ 0.27
CLIP2-201ENST00000223398 K7EPK0 472 aa16.71■□□□□ 0.27
CLIP2-201ENST00000223398 UBBP0CG47 229 aa16.71■□□□□ 0.27
CLIP2-201ENST00000223398 RGS7BPQ6MZT1 257 aaPredicted RBP16.71■□□□□ 0.27
CLIP2-201ENST00000223398 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.71■□□□□ 0.27
CLIP2-201ENST00000223398 ZNF547Q8IVP9 402 aa16.71■□□□□ 0.27
CLIP2-201ENST00000223398 FAM71E2Q8N5Q1 922 aa16.71■□□□□ 0.27
CLIP2-201ENST00000223398 OR13C5Q8NGS8 318 aa16.71■□□□□ 0.27
CLIP2-201ENST00000223398 TECTBQ96PL2 329 aa16.71■□□□□ 0.27
CLIP2-201ENST00000223398 SHARPINQ9H0F6 387 aa16.71■□□□□ 0.27
CLIP2-201ENST00000223398 FAM60AQ9NP50 221 aa16.71■□□□□ 0.27
CLIP2-201ENST00000223398 BCORQ6W2J9 1755 aa16.71■□□□□ 0.27
CLIP2-201ENST00000223398 DIO1P49895 249 aa16.71■□□□□ 0.27
CLIP2-201ENST00000223398 DYRK1AQ13627 763 aa16.71■□□□□ 0.27
CLIP2-201ENST00000223398 GALNT16Q8N428 558 aa16.71■□□□□ 0.27
CLIP2-201ENST00000223398 SLC35G3Q8N808 338 aa16.71■□□□□ 0.27
CLIP2-201ENST00000223398 KIF25Q9UIL4 384 aa16.71■□□□□ 0.27
CLIP2-201ENST00000223398 ARRB2P32121 409 aa16.71■□□□□ 0.27
CLIP2-201ENST00000223398 ZNF529Q6P280 563 aa16.71■□□□□ 0.27
CLIP2-201ENST00000223398 FAM96BQ9Y3D0 163 aa16.71■□□□□ 0.27
CLIP2-201ENST00000223398 CHST2Q9Y4C5 530 aa16.71■□□□□ 0.27
CLIP2-201ENST00000223398 APOA2P02652 100 aa16.71■□□□□ 0.26
CLIP2-201ENST00000223398 ANXA7P20073 488 aaKnown RBP16.71■□□□□ 0.26
CLIP2-201ENST00000223398 ZNF83P51522 516 aa16.71■□□□□ 0.26
CLIP2-201ENST00000223398 DPPA2Q7Z7J5 298 aa16.71■□□□□ 0.26
CLIP2-201ENST00000223398 RBMXL1Q96E39 390 aaKnown RBP16.71■□□□□ 0.26
CLIP2-201ENST00000223398 CNTNAP3BQ96NU0 1288 aa16.71■□□□□ 0.26
CLIP2-201ENST00000223398 KLK4Q9Y5K2 254 aa16.71■□□□□ 0.26
CLIP2-201ENST00000223398 C1orf87Q8N0U7 546 aa16.7■□□□□ 0.26
CLIP2-201ENST00000223398 OR51A2Q8NGJ7 313 aa16.7■□□□□ 0.26
CLIP2-201ENST00000223398 METTL17Q9H7H0 456 aaPredicted RBP16.7■□□□□ 0.26
CLIP2-201ENST00000223398 FBXL2Q9UKC9 423 aa16.7■□□□□ 0.26
CLIP2-201ENST00000223398 HAAOP46952 286 aa16.7■□□□□ 0.26
CLIP2-201ENST00000223398 RBMS3Q6XE24 437 aaKnown RBP16.7■□□□□ 0.26
CLIP2-201ENST00000223398 SIAH3Q8IW03 269 aa16.7■□□□□ 0.26
CLIP2-201ENST00000223398 LHX9Q9NQ69 397 aa16.7■□□□□ 0.26
CLIP2-201ENST00000223398 FZR1Q9UM11 496 aa16.7■□□□□ 0.26
CLIP2-201ENST00000223398 TRDV1A0A1B0GX56 115 aa16.7■□□□□ 0.26
CLIP2-201ENST00000223398 A0A1W2PS29 197 aa16.7■□□□□ 0.26
CLIP2-201ENST00000223398 ANKRD33BA6NCL7 494 aa16.7■□□□□ 0.26
CLIP2-201ENST00000223398 A8MXE2 369 aa16.7■□□□□ 0.26
CLIP2-201ENST00000223398 E9PI62 339 aa16.7■□□□□ 0.26
CLIP2-201ENST00000223398 ABCD4O14678 606 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms