RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 ZNF823P16415 610 aa11.92□□□□□ -0.5
SRP54-201ENST00000216774 NAGAP17050 411 aa11.92□□□□□ -0.5
SRP54-201ENST00000216774 ATF4P18848 351 aaPredicted RBP11.92□□□□□ -0.5
SRP54-201ENST00000216774 NSDHLQ15738 373 aa11.92□□□□□ -0.5
SRP54-201ENST00000216774 TMEM244Q5VVB8 128 aa11.92□□□□□ -0.5
SRP54-201ENST00000216774 LIN54Q6MZP7 749 aa11.92□□□□□ -0.5
SRP54-201ENST00000216774 KCNRGQ8N5I3 272 aa11.92□□□□□ -0.5
SRP54-201ENST00000216774 ZNF441Q8N8Z8 693 aa11.92□□□□□ -0.5
SRP54-201ENST00000216774 ZBTB44Q8NCP5 570 aa11.92□□□□□ -0.5
SRP54-201ENST00000216774 ZNF248Q8NDW4 579 aa11.92□□□□□ -0.5
SRP54-201ENST00000216774 OR1N1Q8NGS0 311 aa11.92□□□□□ -0.5
SRP54-201ENST00000216774 ST8SIA2Q92186 375 aa11.92□□□□□ -0.5
SRP54-201ENST00000216774 AQP3Q92482 292 aa11.92□□□□□ -0.5
SRP54-201ENST00000216774 DMRTA2Q96SC8 542 aa11.92□□□□□ -0.5
SRP54-201ENST00000216774 LDAHQ9H6V9 325 aa11.92□□□□□ -0.5
SRP54-201ENST00000216774 KLK13Q9UKR3 277 aa11.92□□□□□ -0.5
SRP54-201ENST00000216774 METTL21EPA6NDL7 271 aa11.91□□□□□ -0.5
SRP54-201ENST00000216774 FTCDNL1E5RQL4 147 aa11.91□□□□□ -0.5
SRP54-201ENST00000216774 ALOX12BO75342 701 aa11.91□□□□□ -0.5
SRP54-201ENST00000216774 OR2F2O95006 317 aa11.91□□□□□ -0.5
SRP54-201ENST00000216774 GLULP15104 373 aa11.91□□□□□ -0.5
SRP54-201ENST00000216774 CTRB1P17538 263 aa11.91□□□□□ -0.5
SRP54-201ENST00000216774 CD34P28906 385 aa11.91□□□□□ -0.5
SRP54-201ENST00000216774 SPOCK1Q08629 439 aa11.91□□□□□ -0.5
SRP54-201ENST00000216774 TDGQ13569 410 aa11.91□□□□□ -0.5
SRP54-201ENST00000216774 OR2F1Q13607 317 aa11.91□□□□□ -0.5
SRP54-201ENST00000216774 MELKQ14680 651 aa11.91□□□□□ -0.5
SRP54-201ENST00000216774 CTRB2Q6GPI1 263 aa11.91□□□□□ -0.5
SRP54-201ENST00000216774 ARSKQ6UWY0 536 aa11.91□□□□□ -0.5
SRP54-201ENST00000216774 OR13C8Q8NGS7 320 aa11.91□□□□□ -0.5
SRP54-201ENST00000216774 ST7LQ8TDW4 575 aa11.91□□□□□ -0.5
SRP54-201ENST00000216774 OR11A1Q9GZK7 315 aa11.91□□□□□ -0.5
SRP54-201ENST00000216774 SLC2A4RGQ9NR83 387 aa11.91□□□□□ -0.5
SRP54-201ENST00000216774 FBXL2Q9UKC9 423 aa11.91□□□□□ -0.5
SRP54-201ENST00000216774 RAB22AQ9UL26 194 aa11.91□□□□□ -0.5
SRP54-201ENST00000216774 RHBDD3Q9Y3P4 386 aa11.91□□□□□ -0.5
SRP54-201ENST00000216774 THADAQ6YHU6 1953 aa11.91□□□□□ -0.5
SRP54-201ENST00000216774 NPIPB13A6NJU9 1138 aa11.91□□□□□ -0.5
SRP54-201ENST00000216774 SHISA7A6NL88 538 aa11.91□□□□□ -0.5
SRP54-201ENST00000216774 NPIPB4C9JG80 1138 aa11.91□□□□□ -0.5
SRP54-201ENST00000216774 LGALS8O00214 317 aa11.91□□□□□ -0.5
SRP54-201ENST00000216774 MPZL1O95297 269 aa11.91□□□□□ -0.5
SRP54-201ENST00000216774 HLA-GP17693 338 aa11.91□□□□□ -0.5
SRP54-201ENST00000216774 DAP3P51398 398 aaKnown RBP11.91□□□□□ -0.5
SRP54-201ENST00000216774 ZP4Q12836 540 aa11.91□□□□□ -0.5
SRP54-201ENST00000216774 MOGAT2Q3SYC2 334 aa11.91□□□□□ -0.5
SRP54-201ENST00000216774 DCXRQ7Z4W1 244 aa11.91□□□□□ -0.5
SRP54-201ENST00000216774 PXT1Q8NFP0 134 aa11.91□□□□□ -0.5
SRP54-201ENST00000216774 SLC6A7Q99884 636 aa11.91□□□□□ -0.5
SRP54-201ENST00000216774 RASL12Q9NYN1 266 aa11.91□□□□□ -0.5
SRP54-201ENST00000216774 DHCR7Q9UBM7 475 aaKnown RBP11.91□□□□□ -0.5
SRP54-201ENST00000216774 GPR160Q9UJ42 338 aa11.91□□□□□ -0.5
SRP54-201ENST00000216774 GDF2Q9UK05 429 aaPredicted RBP11.91□□□□□ -0.5
SRP54-201ENST00000216774 TNFSF18Q9UNG2 199 aa11.91□□□□□ -0.5
SRP54-201ENST00000216774 PRELID1Q9Y255 219 aa11.91□□□□□ -0.5
SRP54-201ENST00000216774 TMEM269A0A1B0GVZ9 245 aa11.9□□□□□ -0.5
SRP54-201ENST00000216774 CPED1A4D0V7 1026 aa11.9□□□□□ -0.5
SRP54-201ENST00000216774 TMEM235A6NFC5 223 aa11.9□□□□□ -0.5
SRP54-201ENST00000216774 SOX1O00570 391 aaPredicted RBP11.9□□□□□ -0.5
SRP54-201ENST00000216774 HLA-AP01891 365 aaKnown RBP11.9□□□□□ -0.5
SRP54-201ENST00000216774 ZNF28P17035 718 aa11.9□□□□□ -0.5
SRP54-201ENST00000216774 FBLP22087 321 aaKnown RBP11.9□□□□□ -0.5
SRP54-201ENST00000216774 CD96P40200 585 aa11.9□□□□□ -0.5
SRP54-201ENST00000216774 EFNA3P52797 238 aa11.9□□□□□ -0.5
SRP54-201ENST00000216774 HSD11B2P80365 405 aa11.9□□□□□ -0.5
SRP54-201ENST00000216774 SCGB2B2Q4G0G5 96 aa11.9□□□□□ -0.5
SRP54-201ENST00000216774 LRFN4Q6PJG9 635 aa11.9□□□□□ -0.5
SRP54-201ENST00000216774 SLC25A42Q86VD7 318 aa11.9□□□□□ -0.5
SRP54-201ENST00000216774 MISPQ8IVT2 679 aa11.9□□□□□ -0.5
SRP54-201ENST00000216774 CARFQ8N187 725 aa11.9□□□□□ -0.5
SRP54-201ENST00000216774 ASB10Q8WXI3 467 aa11.9□□□□□ -0.5
SRP54-201ENST00000216774 TMEM234Q8WY98 164 aa11.9□□□□□ -0.5
SRP54-201ENST00000216774 ZBTB8AQ96BR9 441 aa11.9□□□□□ -0.5
SRP54-201ENST00000216774 PHYHIPLQ96FC7 376 aa11.9□□□□□ -0.5
SRP54-201ENST00000216774 GAL3ST1Q99999 423 aa11.9□□□□□ -0.5
SRP54-201ENST00000216774 C12orf4Q9NQ89 552 aa11.9□□□□□ -0.5
SRP54-201ENST00000216774 COMMD9Q9P000 198 aa11.9□□□□□ -0.5
SRP54-201ENST00000216774 ZNF230Q9UIE0 474 aaPredicted RBP11.9□□□□□ -0.5
SRP54-201ENST00000216774 FARSAQ9Y285 508 aaKnown RBP11.9□□□□□ -0.5
SRP54-201ENST00000216774 KANTRA0A1W2PQU2 76 aa11.9□□□□□ -0.5
SRP54-201ENST00000216774 OR14I1A6ND48 311 aa11.9□□□□□ -0.5
SRP54-201ENST00000216774 BCL2L11O43521 198 aa11.9□□□□□ -0.5
SRP54-201ENST00000216774 SCGNO76038 276 aa11.9□□□□□ -0.5
SRP54-201ENST00000216774 HLA-DOBP13765 273 aa11.9□□□□□ -0.5
SRP54-201ENST00000216774 MMP16P51512 607 aa11.9□□□□□ -0.5
SRP54-201ENST00000216774 ZNF273Q14593 569 aa11.9□□□□□ -0.5
SRP54-201ENST00000216774 RNASE10Q5GAN6 216 aaKnown RBP11.9□□□□□ -0.5
SRP54-201ENST00000216774 VWA2Q5GFL6 755 aa11.9□□□□□ -0.5
SRP54-201ENST00000216774 C11orf87Q6NUJ2 197 aa11.9□□□□□ -0.5
SRP54-201ENST00000216774 JMJD6Q6NYC1 403 aaPredicted RBP11.9□□□□□ -0.5
SRP54-201ENST00000216774 FAHD2BQ6P2I3 314 aaPredicted RBP11.9□□□□□ -0.5
SRP54-201ENST00000216774 ZDHHC22Q8N966 263 aa11.9□□□□□ -0.5
SRP54-201ENST00000216774 OR4D6Q8NGJ1 314 aa11.9□□□□□ -0.5
SRP54-201ENST00000216774 MRPS24Q96EL2 167 aaKnown RBP11.9□□□□□ -0.5
SRP54-201ENST00000216774 FAHD2AQ96GK7 314 aa11.9□□□□□ -0.5
SRP54-201ENST00000216774 ZMAT3Q9HA38 289 aaKnown RBP11.9□□□□□ -0.5
SRP54-201ENST00000216774 ZNF304Q9HCX3 659 aa11.9□□□□□ -0.5
SRP54-201ENST00000216774 NOP16Q9Y3C1 178 aaKnown RBP11.9□□□□□ -0.5
SRP54-201ENST00000216774 NPIPA5E9PKD4 350 aa11.89□□□□□ -0.51
SRP54-201ENST00000216774 MS4A18H0YCH9 400 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms