RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 GPR160Q9UJ42 338 aa12.4□□□□□ -0.42
TGFBR3-201ENST00000212355 DAPP1Q9UN19 280 aa12.4□□□□□ -0.42
TGFBR3-201ENST00000212355 CD3DP04234 171 aa12.4□□□□□ -0.42
TGFBR3-201ENST00000212355 CATR1Q13166 79 aa12.4□□□□□ -0.42
TGFBR3-201ENST00000212355 MARC2Q969Z3 335 aa12.4□□□□□ -0.42
TGFBR3-201ENST00000212355 GPR84Q9NQS5 396 aa12.4□□□□□ -0.42
TGFBR3-201ENST00000212355 A0A1B0GX78 115 aa12.4□□□□□ -0.43
TGFBR3-201ENST00000212355 ABLIM3O94929 683 aa12.4□□□□□ -0.43
TGFBR3-201ENST00000212355 AQP6Q13520 282 aa12.4□□□□□ -0.43
TGFBR3-201ENST00000212355 OR8G1Q15617 311 aa12.4□□□□□ -0.43
TGFBR3-201ENST00000212355 Q6ZNX1 250 aa12.4□□□□□ -0.43
TGFBR3-201ENST00000212355 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.4□□□□□ -0.43
TGFBR3-201ENST00000212355 EPHX3Q9H6B9 360 aa12.4□□□□□ -0.43
TGFBR3-201ENST00000212355 SLC22A11Q9NSA0 550 aa12.4□□□□□ -0.43
TGFBR3-201ENST00000212355 NPFFR2Q9Y5X5 522 aa12.4□□□□□ -0.43
TGFBR3-201ENST00000212355 TRAF3IP2O43734 574 aaPredicted RBP12.39□□□□□ -0.43
TGFBR3-201ENST00000212355 OR2F2O95006 317 aa12.39□□□□□ -0.43
TGFBR3-201ENST00000212355 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.39□□□□□ -0.43
TGFBR3-201ENST00000212355 TBC1D28Q2M2D7 210 aa12.39□□□□□ -0.43
TGFBR3-201ENST00000212355 C20orf196Q8IYI0 205 aa12.39□□□□□ -0.43
TGFBR3-201ENST00000212355 EDAQ92838 391 aa12.39□□□□□ -0.43
TGFBR3-201ENST00000212355 SLCO1C1Q9NYB5 712 aa12.39□□□□□ -0.43
TGFBR3-201ENST00000212355 ZNF230Q9UIE0 474 aaPredicted RBP12.39□□□□□ -0.43
TGFBR3-201ENST00000212355 OR5K3A6NET4 321 aa12.39□□□□□ -0.43
TGFBR3-201ENST00000212355 IDSB3KWA1 339 aa12.39□□□□□ -0.43
TGFBR3-201ENST00000212355 H3BP45 60 aa12.39□□□□□ -0.43
TGFBR3-201ENST00000212355 ZNF195O14628 629 aa12.39□□□□□ -0.43
TGFBR3-201ENST00000212355 XRCC2O43543 280 aa12.39□□□□□ -0.43
TGFBR3-201ENST00000212355 UBE2G2P60604 165 aa12.39□□□□□ -0.43
TGFBR3-201ENST00000212355 VN1R2Q8NFZ6 395 aa12.39□□□□□ -0.43
TGFBR3-201ENST00000212355 MARCH1Q8TCQ1 289 aa12.39□□□□□ -0.43
TGFBR3-201ENST00000212355 FBXW5Q969U6 566 aa12.39□□□□□ -0.43
TGFBR3-201ENST00000212355 KIR3DX1Q9H7L2 352 aa12.39□□□□□ -0.43
TGFBR3-201ENST00000212355 TLCD2A6NGC4 264 aa12.39□□□□□ -0.43
TGFBR3-201ENST00000212355 ADAM23O75077 832 aa12.39□□□□□ -0.43
TGFBR3-201ENST00000212355 WDR1O75083 606 aa12.39□□□□□ -0.43
TGFBR3-201ENST00000212355 YIF1AO95070 293 aa12.39□□□□□ -0.43
TGFBR3-201ENST00000212355 NTF3P20783 257 aa12.39□□□□□ -0.43
TGFBR3-201ENST00000212355 CYB561P49447 251 aa12.39□□□□□ -0.43
TGFBR3-201ENST00000212355 ZNF816Q0VGE8 651 aaPredicted RBP12.39□□□□□ -0.43
TGFBR3-201ENST00000212355 SPINK9Q5DT21 86 aa12.39□□□□□ -0.43
TGFBR3-201ENST00000212355 H2BFWTQ7Z2G1 175 aa12.39□□□□□ -0.43
TGFBR3-201ENST00000212355 ST8SIA4Q92187 359 aa12.39□□□□□ -0.43
TGFBR3-201ENST00000212355 NARFLQ9H6Q4 476 aa12.39□□□□□ -0.43
TGFBR3-201ENST00000212355 GLSO94925 669 aaPredicted RBP12.39□□□□□ -0.43
TGFBR3-201ENST00000212355 OR2C1O95371 312 aa12.39□□□□□ -0.43
TGFBR3-201ENST00000212355 LAP3P28838 519 aa12.39□□□□□ -0.43
TGFBR3-201ENST00000212355 CD80P33681 288 aa12.39□□□□□ -0.43
TGFBR3-201ENST00000212355 SNRPGP62308 76 aaKnown RBP12.39□□□□□ -0.43
TGFBR3-201ENST00000212355 YPEL5P62699 121 aa12.39□□□□□ -0.43
TGFBR3-201ENST00000212355 TAGLNQ01995 201 aaKnown RBP12.39□□□□□ -0.43
TGFBR3-201ENST00000212355 TMEM52BQ4KMG9 183 aa12.39□□□□□ -0.43
TGFBR3-201ENST00000212355 TMEM41BQ5BJD5 291 aa12.39□□□□□ -0.43
TGFBR3-201ENST00000212355 OR52N5Q8NH56 324 aa12.39□□□□□ -0.43
TGFBR3-201ENST00000212355 OPALINQ96PE5 141 aa12.39□□□□□ -0.43
TGFBR3-201ENST00000212355 ASCC3Q8N3C0 2202 aaKnown RBP12.39□□□□□ -0.43
TGFBR3-201ENST00000212355 PDZK1IP1Q13113 114 aa12.39□□□□□ -0.43
TGFBR3-201ENST00000212355 ESCO2Q56NI9 601 aa12.39□□□□□ -0.43
TGFBR3-201ENST00000212355 RPUSD4Q96CM3 377 aaKnown RBP12.39□□□□□ -0.43
TGFBR3-201ENST00000212355 SARGQ9BW04 601 aa12.39□□□□□ -0.43
TGFBR3-201ENST00000212355 MED9Q9NWA0 146 aa12.39□□□□□ -0.43
TGFBR3-201ENST00000212355 PADI1Q9ULC6 663 aa12.39□□□□□ -0.43
TGFBR3-201ENST00000212355 NTN1O95631 604 aa12.38□□□□□ -0.43
TGFBR3-201ENST00000212355 ZNF718Q3SXZ3 478 aa12.38□□□□□ -0.43
TGFBR3-201ENST00000212355 C16orf52Q8NHV5 167 aa12.38□□□□□ -0.43
TGFBR3-201ENST00000212355 GINS3Q9BRX5 216 aa12.38□□□□□ -0.43
TGFBR3-201ENST00000212355 NXF2Q9GZY0 626 aaKnown RBP12.38□□□□□ -0.43
TGFBR3-201ENST00000212355 KCNK15Q9H427 330 aa12.38□□□□□ -0.43
TGFBR3-201ENST00000212355 FSCN3Q9NQT6 498 aa12.38□□□□□ -0.43
TGFBR3-201ENST00000212355 MYH14Q7Z406 1995 aaKnown RBP12.38□□□□□ -0.43
TGFBR3-201ENST00000212355 RNF212BA8MTL3 300 aa12.38□□□□□ -0.43
TGFBR3-201ENST00000212355 ZNF732B4DXR9 585 aa12.38□□□□□ -0.43
TGFBR3-201ENST00000212355 CCR9P51686 369 aa12.38□□□□□ -0.43
TGFBR3-201ENST00000212355 UBE2IP63279 158 aaKnown RBP12.38□□□□□ -0.43
TGFBR3-201ENST00000212355 TAF9Q16594 264 aa12.38□□□□□ -0.43
TGFBR3-201ENST00000212355 OR11L1Q8NGX0 322 aa12.38□□□□□ -0.43
TGFBR3-201ENST00000212355 UPRTQ96BW1 309 aa12.38□□□□□ -0.43
TGFBR3-201ENST00000212355 LRFN5Q96NI6 719 aa12.38□□□□□ -0.43
TGFBR3-201ENST00000212355 ASB16Q96NS5 453 aa12.38□□□□□ -0.43
TGFBR3-201ENST00000212355 PDFQ9HBH1 243 aa12.38□□□□□ -0.43
TGFBR3-201ENST00000212355 TRIP11Q15643 1979 aa12.38□□□□□ -0.43
TGFBR3-201ENST00000212355 HOXC13P31276 330 aa12.38□□□□□ -0.43
TGFBR3-201ENST00000212355 FAM199XQ6PEV8 388 aaPredicted RBP12.38□□□□□ -0.43
TGFBR3-201ENST00000212355 OR1M1Q8NGA1 313 aa12.38□□□□□ -0.43
TGFBR3-201ENST00000212355 SLC7A6Q92536 515 aa12.38□□□□□ -0.43
TGFBR3-201ENST00000212355 OBP2AQ9NY56 170 aa12.38□□□□□ -0.43
TGFBR3-201ENST00000212355 ITGB4P16144 1822 aa12.38□□□□□ -0.43
TGFBR3-201ENST00000212355 IGHV3-13P01766 116 aa12.38□□□□□ -0.43
TGFBR3-201ENST00000212355 IGHV3-7P01780 117 aa12.38□□□□□ -0.43
TGFBR3-201ENST00000212355 FABP6P51161 128 aa12.38□□□□□ -0.43
TGFBR3-201ENST00000212355 HBG1P69891 147 aa12.38□□□□□ -0.43
TGFBR3-201ENST00000212355 HBG2P69892 147 aa12.38□□□□□ -0.43
TGFBR3-201ENST00000212355 ACTBL2Q562R1 376 aa12.38□□□□□ -0.43
TGFBR3-201ENST00000212355 MAMSTRQ6ZN01 415 aa12.38□□□□□ -0.43
TGFBR3-201ENST00000212355 OR4F5Q8NH21 305 aa12.38□□□□□ -0.43
TGFBR3-201ENST00000212355 OR4F4Q96R69 305 aa12.38□□□□□ -0.43
TGFBR3-201ENST00000212355 NIPSNAP3BQ9BS92 247 aa12.38□□□□□ -0.43
TGFBR3-201ENST00000212355 UPK1AO00322 258 aa12.38□□□□□ -0.43
TGFBR3-201ENST00000212355 FLI1Q01543 452 aaPredicted RBP12.38□□□□□ -0.43
TGFBR3-201ENST00000212355 KIAA0141Q14154 515 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms