RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 SNIP1Q8TAD8 396 aaKnown RBP17.4■□□□□ 0.38
TNFRSF1A-201ENST00000162749 PNPLA2Q96AD5 504 aa17.4■□□□□ 0.38
TNFRSF1A-201ENST00000162749 C11orf54Q9H0W9 315 aaPredicted RBP17.4■□□□□ 0.38
TNFRSF1A-201ENST00000162749 MALT1Q9UDY8 824 aa17.4■□□□□ 0.38
TNFRSF1A-201ENST00000162749 ARHGAP21Q5T5U3 1957 aa17.4■□□□□ 0.38
TNFRSF1A-201ENST00000162749 OR4C45A6NMZ5 311 aa17.4■□□□□ 0.38
TNFRSF1A-201ENST00000162749 RIDAP52758 137 aaKnown RBP17.4■□□□□ 0.38
TNFRSF1A-201ENST00000162749 FDX2Q6P4F2 183 aa17.4■□□□□ 0.38
TNFRSF1A-201ENST00000162749 C20orf196Q8IYI0 205 aa17.4■□□□□ 0.38
TNFRSF1A-201ENST00000162749 OR5AK2Q8NH90 309 aa17.4■□□□□ 0.38
TNFRSF1A-201ENST00000162749 RNF133Q8WVZ7 376 aa17.4■□□□□ 0.38
TNFRSF1A-201ENST00000162749 LDAHQ9H6V9 325 aa17.4■□□□□ 0.38
TNFRSF1A-201ENST00000162749 GTF3C1Q12789 2109 aa17.39■□□□□ 0.38
TNFRSF1A-201ENST00000162749 TRGV5A0A0B4J1U4 118 aa17.39■□□□□ 0.37
TNFRSF1A-201ENST00000162749 PNPP00491 289 aa17.39■□□□□ 0.37
TNFRSF1A-201ENST00000162749 ZNF24P17028 368 aa17.39■□□□□ 0.37
TNFRSF1A-201ENST00000162749 CFL1P23528 166 aaKnown RBP17.39■□□□□ 0.37
TNFRSF1A-201ENST00000162749 KCNMB1Q16558 191 aa17.39■□□□□ 0.37
TNFRSF1A-201ENST00000162749 C3AR1Q16581 482 aa17.39■□□□□ 0.37
TNFRSF1A-201ENST00000162749 INTS12Q96CB8 462 aaKnown RBP17.39■□□□□ 0.37
TNFRSF1A-201ENST00000162749 C4orf45Q96LM5 186 aa17.39■□□□□ 0.37
TNFRSF1A-201ENST00000162749 DCBLD2Q96PD2 775 aa17.39■□□□□ 0.37
TNFRSF1A-201ENST00000162749 PAQR5Q9NXK6 330 aaPredicted RBP17.39■□□□□ 0.37
TNFRSF1A-201ENST00000162749 FBXL3Q9UKT7 428 aa17.39■□□□□ 0.37
TNFRSF1A-201ENST00000162749 SSUH2Q9Y2M2 353 aa17.39■□□□□ 0.37
TNFRSF1A-201ENST00000162749 A0A1W2PPK0 400 aa17.39■□□□□ 0.37
TNFRSF1A-201ENST00000162749 WDR38Q5JTN6 314 aa17.39■□□□□ 0.37
TNFRSF1A-201ENST00000162749 METAP1DQ6UB28 335 aaPredicted RBP17.39■□□□□ 0.37
TNFRSF1A-201ENST00000162749 TEX19Q8NA77 164 aa17.39■□□□□ 0.37
TNFRSF1A-201ENST00000162749 OR10S1Q8NGN2 331 aa17.39■□□□□ 0.37
TNFRSF1A-201ENST00000162749 ULBP2Q9BZM5 246 aa17.39■□□□□ 0.37
TNFRSF1A-201ENST00000162749 MMP28Q9H239 520 aa17.39■□□□□ 0.37
TNFRSF1A-201ENST00000162749 B3GAT2Q9NPZ5 323 aa17.39■□□□□ 0.37
TNFRSF1A-201ENST00000162749 SPRR3Q9UBC9 169 aa17.39■□□□□ 0.37
TNFRSF1A-201ENST00000162749 ASH2LQ9UBL3 628 aa17.39■□□□□ 0.37
TNFRSF1A-201ENST00000162749 POLR1DQ9Y2S0 133 aa17.39■□□□□ 0.37
TNFRSF1A-201ENST00000162749 TFECO14948 347 aaPredicted RBP17.38■□□□□ 0.37
TNFRSF1A-201ENST00000162749 DHHO43323 396 aa17.38■□□□□ 0.37
TNFRSF1A-201ENST00000162749 GATBO75879 557 aaKnown RBP17.38■□□□□ 0.37
TNFRSF1A-201ENST00000162749 KIR3DL2P43630 455 aa17.38■□□□□ 0.37
TNFRSF1A-201ENST00000162749 MZT2AQ6P582 158 aa17.38■□□□□ 0.37
TNFRSF1A-201ENST00000162749 DEGS2Q6QHC5 323 aa17.38■□□□□ 0.37
TNFRSF1A-201ENST00000162749 PAMR1Q6UXH9 720 aa17.38■□□□□ 0.37
TNFRSF1A-201ENST00000162749 CFAP77Q6ZQR2 320 aa17.38■□□□□ 0.37
TNFRSF1A-201ENST00000162749 AAED1Q7RTV5 226 aa17.38■□□□□ 0.37
TNFRSF1A-201ENST00000162749 FNDC9Q8TBE3 224 aa17.38■□□□□ 0.37
TNFRSF1A-201ENST00000162749 SLAMF6Q96DU3 332 aa17.38■□□□□ 0.37
TNFRSF1A-201ENST00000162749 ZNF837Q96EG3 531 aaPredicted RBP17.38■□□□□ 0.37
TNFRSF1A-201ENST00000162749 NELFAQ9H3P2 528 aa17.38■□□□□ 0.37
TNFRSF1A-201ENST00000162749 C1orf198Q9H425 327 aa17.38■□□□□ 0.37
TNFRSF1A-201ENST00000162749 EXO5Q9H790 373 aa17.38■□□□□ 0.37
TNFRSF1A-201ENST00000162749 GDF2Q9UK05 429 aaPredicted RBP17.38■□□□□ 0.37
TNFRSF1A-201ENST00000162749 IGKV3D-15A0A087WSY6 115 aa17.37■□□□□ 0.37
TNFRSF1A-201ENST00000162749 TMEM212A6NML5 194 aa17.37■□□□□ 0.37
TNFRSF1A-201ENST00000162749 ZNF254O75437 659 aa17.37■□□□□ 0.37
TNFRSF1A-201ENST00000162749 HLA-DQB1P01920 261 aa17.37■□□□□ 0.37
TNFRSF1A-201ENST00000162749 UCHL1P09936 223 aa17.37■□□□□ 0.37
TNFRSF1A-201ENST00000162749 THBS2P35442 1172 aa17.37■□□□□ 0.37
TNFRSF1A-201ENST00000162749 OR10A3P58181 314 aa17.37■□□□□ 0.37
TNFRSF1A-201ENST00000162749 MFGE8Q08431 387 aaPredicted RBP17.37■□□□□ 0.37
TNFRSF1A-201ENST00000162749 IDNKQ5T6J7 187 aa17.37■□□□□ 0.37
TNFRSF1A-201ENST00000162749 UNQ9370/PRO34162Q6UXP9 181 aa17.37■□□□□ 0.37
TNFRSF1A-201ENST00000162749 FOXL2NBQ6ZUU3 175 aa17.37■□□□□ 0.37
TNFRSF1A-201ENST00000162749 RBM24Q9BX46 236 aaKnown RBP17.37■□□□□ 0.37
TNFRSF1A-201ENST00000162749 SLC22A4Q9H015 551 aa17.37■□□□□ 0.37
TNFRSF1A-201ENST00000162749 MCTS1Q9ULC4 181 aaKnown RBP17.37■□□□□ 0.37
TNFRSF1A-201ENST00000162749 SLC43A1O75387 559 aa17.37■□□□□ 0.37
TNFRSF1A-201ENST00000162749 SRSF10O75494 262 aaKnown RBP17.37■□□□□ 0.37
TNFRSF1A-201ENST00000162749 ELK1P19419 428 aa17.37■□□□□ 0.37
TNFRSF1A-201ENST00000162749 MAGEB1P43366 347 aa17.37■□□□□ 0.37
TNFRSF1A-201ENST00000162749 CCR9P51686 369 aa17.37■□□□□ 0.37
TNFRSF1A-201ENST00000162749 RIN1Q13671 783 aa17.37■□□□□ 0.37
TNFRSF1A-201ENST00000162749 KCNJ8Q15842 424 aa17.37■□□□□ 0.37
TNFRSF1A-201ENST00000162749 IGFL3Q6UXB1 125 aa17.37■□□□□ 0.37
TNFRSF1A-201ENST00000162749 Q8N402 240 aa17.37■□□□□ 0.37
TNFRSF1A-201ENST00000162749 NABP1Q96AH0 204 aa17.37■□□□□ 0.37
TNFRSF1A-201ENST00000162749 CENPMQ9NSP4 180 aa17.37■□□□□ 0.37
TNFRSF1A-201ENST00000162749 NPAP1Q9NZP6 1156 aa17.37■□□□□ 0.37
TNFRSF1A-201ENST00000162749 MSRB2Q9Y3D2 182 aa17.37■□□□□ 0.37
TNFRSF1A-201ENST00000162749 A0A0G2JK05 382 aa17.36■□□□□ 0.37
TNFRSF1A-201ENST00000162749 ACOD1A6NK06 481 aa17.36■□□□□ 0.37
TNFRSF1A-201ENST00000162749 ZNF879B4DU55 563 aa17.36■□□□□ 0.37
TNFRSF1A-201ENST00000162749 ARL6IP5O75915 188 aa17.36■□□□□ 0.37
TNFRSF1A-201ENST00000162749 SYNGR4O95473 234 aa17.36■□□□□ 0.37
TNFRSF1A-201ENST00000162749 SLC2A2P11168 524 aaPredicted RBP17.36■□□□□ 0.37
TNFRSF1A-201ENST00000162749 MYL9P24844 172 aa17.36■□□□□ 0.37
TNFRSF1A-201ENST00000162749 IL18Q14116 193 aa17.36■□□□□ 0.37
TNFRSF1A-201ENST00000162749 ODF4Q2M2E3 257 aa17.36■□□□□ 0.37
TNFRSF1A-201ENST00000162749 RDH10Q8IZV5 341 aa17.36■□□□□ 0.37
TNFRSF1A-201ENST00000162749 UBE2J2Q8N2K1 259 aa17.36■□□□□ 0.37
TNFRSF1A-201ENST00000162749 ZNF676Q8N7Q3 588 aa17.36■□□□□ 0.37
TNFRSF1A-201ENST00000162749 ACOT12Q8WYK0 555 aa17.36■□□□□ 0.37
TNFRSF1A-201ENST00000162749 ALKBH3Q96Q83 286 aaPredicted RBP17.36■□□□□ 0.37
TNFRSF1A-201ENST00000162749 ZNF416Q9BWM5 594 aa17.36■□□□□ 0.37
TNFRSF1A-201ENST00000162749 COMMD4Q9H0A8 199 aa17.36■□□□□ 0.37
TNFRSF1A-201ENST00000162749 POU2F3Q9UKI9 436 aa17.36■□□□□ 0.37
TNFRSF1A-201ENST00000162749 DSPP15924 2871 aaKnown RBP17.36■□□□□ 0.37
TNFRSF1A-201ENST00000162749 CPN1P15169 458 aa17.36■□□□□ 0.37
TNFRSF1A-201ENST00000162749 MSR1P21757 451 aa17.36■□□□□ 0.37
TNFRSF1A-201ENST00000162749 GUCA1AP43080 201 aaPredicted RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms