RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 SYT7O43581 403 aa7.36□□□□□ -1.23
VAMP3-201ENST00000054666 STK17BO94768 372 aa7.36□□□□□ -1.23
VAMP3-201ENST00000054666 CSF1P09603 554 aa7.36□□□□□ -1.23
VAMP3-201ENST00000054666 ZNF883P0CG24 379 aa7.36□□□□□ -1.23
VAMP3-201ENST00000054666 TMIGD3P0DMS9 266 aaPredicted RBP7.36□□□□□ -1.23
VAMP3-201ENST00000054666 CCL3P10147 92 aa7.36□□□□□ -1.23
VAMP3-201ENST00000054666 LIFP15018 202 aa7.36□□□□□ -1.23
VAMP3-201ENST00000054666 IGFBP3P17936 291 aaPredicted RBP7.36□□□□□ -1.23
VAMP3-201ENST00000054666 MPLP40238 635 aa7.36□□□□□ -1.23
VAMP3-201ENST00000054666 GUCA1AP43080 201 aaPredicted RBP7.36□□□□□ -1.23
VAMP3-201ENST00000054666 P2RY4P51582 365 aa7.36□□□□□ -1.23
VAMP3-201ENST00000054666 PSMA6P60900 246 aaKnown RBP7.36□□□□□ -1.23
VAMP3-201ENST00000054666 RPS15P62841 145 aaKnown RBP7.36□□□□□ -1.23
VAMP3-201ENST00000054666 ZNF239Q16600 458 aaKnown RBP7.36□□□□□ -1.23
VAMP3-201ENST00000054666 GSG1Q2KHT4 349 aa7.36□□□□□ -1.23
VAMP3-201ENST00000054666 PCGF3Q3KNV8 242 aa7.36□□□□□ -1.23
VAMP3-201ENST00000054666 STPG1Q5TH74 334 aa7.36□□□□□ -1.23
VAMP3-201ENST00000054666 SFRP4Q6FHJ7 346 aaPredicted RBP7.36□□□□□ -1.23
VAMP3-201ENST00000054666 WDFY1Q8IWB7 410 aa7.36□□□□□ -1.23
VAMP3-201ENST00000054666 DTWD2Q8NBA8 298 aa7.36□□□□□ -1.23
VAMP3-201ENST00000054666 RHBDD1Q8TEB9 315 aa7.36□□□□□ -1.23
VAMP3-201ENST00000054666 FOXRED1Q96CU9 486 aaPredicted RBP7.36□□□□□ -1.23
VAMP3-201ENST00000054666 ATG5Q9H1Y0 275 aa7.36□□□□□ -1.23
VAMP3-201ENST00000054666 SMOC1Q9H4F8 434 aa7.36□□□□□ -1.23
VAMP3-201ENST00000054666 EMC7Q9NPA0 242 aa7.36□□□□□ -1.23
VAMP3-201ENST00000054666 GDF2Q9UK05 429 aaPredicted RBP7.36□□□□□ -1.23
VAMP3-201ENST00000054666 LOXL2Q9Y4K0 774 aa7.36□□□□□ -1.23
VAMP3-201ENST00000054666 ZDBF2Q9HCK1 2354 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 TMEM272A0A1B0GTI8 110 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 GJE1A6NN92 205 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 NPIPA2E9PIF3 369 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 NPIPA3F8WFD2 350 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 GMDSO60547 372 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 EIF1BO60739 113 aaKnown RBP7.35□□□□□ -1.23
VAMP3-201ENST00000054666 PTHLHP12272 177 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 ICAM2P13598 275 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 ZNF17P17021 662 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 OTX2P32243 289 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 GNALP38405 381 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 MLF1P58340 268 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 ACTBP60709 375 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 ACTG1P63261 375 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 CSNK2A1P68400 391 aaPredicted RBP7.35□□□□□ -1.23
VAMP3-201ENST00000054666 SPOCK1Q08629 439 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 C2orf76Q3KRA6 126 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 GLYATL3Q5SZD4 288 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 METTL11BQ5VVY1 283 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 COMMD2Q86X83 199 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 GRPEL2Q8TAA5 225 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 SGCZQ96LD1 299 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 SORCS2Q96PQ0 1159 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 ZPBPQ9BS86 351 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 NAA11Q9BSU3 229 aaPredicted RBP7.35□□□□□ -1.23
VAMP3-201ENST00000054666 PBOV1Q9GZY1 135 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 FAM206AQ9NX38 181 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 PTTG3PQ9NZH4 202 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 PADI1Q9ULC6 663 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 BOLA1Q9Y3E2 137 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 TECTAO75443 2155 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 TRAV18A0A075B6X5 111 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 A0A1B0GUH1 482 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 LOC102725191A0A1B0GVB3 256 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 DCDC2BA2VCK2 349 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 H7C417 338 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 ARPC1BO15143 372 aaKnown RBP7.35□□□□□ -1.23
VAMP3-201ENST00000054666 DOK2O60496 412 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 VAMP5O95183 116 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 QDPRP09417 244 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 ACSM4P0C7M7 580 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 JMJD7P0C870 316 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 ZNF20P17024 532 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 CSRP1P21291 193 aaKnown RBP7.35□□□□□ -1.23
VAMP3-201ENST00000054666 BDKRB2P30411 391 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 PRSS3P35030 304 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 RCVRNP35243 200 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 CSNK1A1P48729 337 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 VEGFCP49767 419 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 EFNB2P52799 333 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 CLDN17P56750 224 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 GABREP78334 506 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 FOXK1P85037 733 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 SSBP1Q04837 148 aaKnown RBP7.35□□□□□ -1.23
VAMP3-201ENST00000054666 TNK1Q13470 666 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 CCDC157Q569K6 752 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 ASPHD2Q6ICH7 369 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 FAM166AQ6J272 317 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 SLC25A47Q6Q0C1 308 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 ELMOD2Q8IZ81 293 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 TMEM105Q8N8V8 129 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 OR6N1Q8NGY5 312 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 PNPLA2Q96AD5 504 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 TMEM41AQ96HV5 264 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 PIGQQ9BRB3 760 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 GON7Q9BXV9 100 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 OR10A4Q9H209 315 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 KCNK15Q9H427 330 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 RANBP3Q9H6Z4 567 aaPredicted RBP7.35□□□□□ -1.23
VAMP3-201ENST00000054666 GPN1Q9HCN4 374 aaPredicted RBP7.35□□□□□ -1.23
VAMP3-201ENST00000054666 PLSCR3Q9NRY6 295 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 ASH2LQ9UBL3 628 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms