RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 CSF3RQ99062 836 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 PKMYT1Q99640 499 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 CPPED1Q9BRF8 314 aaPredicted RBP5.58□□□□□ -1.52
VPS13D-201ENST00000011700 SEC11CQ9BY50 192 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 IL23AQ9NPF7 189 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 SOCS7O14512 581 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 DEGS1O15121 323 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 CBX7O95931 251 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 STT3AP46977 705 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 CEACAM7Q14002 265 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 ZNF542PQ5EBM4 170 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 SPICQ8N5J4 248 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 LKAAEAR1Q8TD35 194 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 ADTRPQ96IZ2 230 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 TOX2Q96NM4 488 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 PECRQ9BY49 303 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 RANGRFQ9HD47 186 aaPredicted RBP5.58□□□□□ -1.52
VPS13D-201ENST00000011700 SLC5A6Q9Y289 635 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 ZSWIM8A7E2V4 1837 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 PAPPAQ13219 1627 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 ZNF814B7Z6K7 855 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 CNIH1O95406 144 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 EN2P19622 333 aaPredicted RBP5.58□□□□□ -1.52
VPS13D-201ENST00000011700 CNN1P51911 297 aaKnown RBP5.58□□□□□ -1.52
VPS13D-201ENST00000011700 SELENBP1Q13228 472 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 PIN1Q13526 163 aaPredicted RBP5.58□□□□□ -1.52
VPS13D-201ENST00000011700 LRRC26Q2I0M4 334 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 FBXL6Q8N531 539 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 FBXW5Q969U6 566 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 PWWP2AQ96N64 755 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 A0A0B4J203 849 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 HPP00738 406 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 CTSLP07711 333 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 PRKACGP22612 351 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 FGF14Q92915 247 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 SPSB1Q96BD6 273 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 ZNF426Q9BUY5 554 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 ZNF629Q9UEG4 869 aaPredicted RBP5.58□□□□□ -1.52
VPS13D-201ENST00000011700 PIGLQ9Y2B2 252 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 AMMECR1Q9Y4X0 333 aaPredicted RBP5.58□□□□□ -1.52
VPS13D-201ENST00000011700 SORL1Q92673 2214 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 PHOX2AO14813 284 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 PHF1O43189 567 aaPredicted RBP5.58□□□□□ -1.52
VPS13D-201ENST00000011700 HRO43593 1189 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 GJB3O75712 270 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 APEHP13798 732 aaKnown RBP5.58□□□□□ -1.52
VPS13D-201ENST00000011700 CYB561P49447 251 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 PDZK1IP1Q13113 114 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 ZBTB37Q5TC79 503 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 OR52W1Q6IF63 320 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 CPEB2Q7Z5Q1 589 aaKnown RBP5.58□□□□□ -1.52
VPS13D-201ENST00000011700 OR2M7Q8NG81 312 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 OR2T6Q8NHC8 308 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 LINC01599Q8WXQ3 324 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 GRAMD2BQ96HH9 432 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 NUDT22Q9BRQ3 303 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 ACSS2Q9NR19 701 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 RCE1Q9Y256 329 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 SERINC4A6NH21 518 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 CCL22O00626 93 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 CDC123O75794 336 aaPredicted RBP5.58□□□□□ -1.52
VPS13D-201ENST00000011700 ACVRL1P37023 503 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 RNF4P78317 190 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 OR4D1Q15615 310 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 RNF165Q6ZSG1 346 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 SLC38A9Q8NBW4 561 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 OR5B3Q8NH48 314 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 VSTM2AQ8TAG5 236 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 ST7LQ8TDW4 575 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 LIPHQ8WWY8 451 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 C14orf79Q96F83 325 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 POM121L2Q96KW2 1035 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 CEP192Q8TEP8 1941 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 TCRBV7S3A2A0A539 114 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 FIGNL2A6NMB9 653 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 CDKN2DP55273 166 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 CARD18P57730 90 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 DPTQ07507 201 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 EBPQ15125 230 aaKnown RBP5.58□□□□□ -1.52
VPS13D-201ENST00000011700 OR7A5Q15622 319 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 C11orf91Q3C1V1 193 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 GLYATL3Q5SZD4 288 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 ABHD4Q8TB40 342 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 GHSRQ92847 366 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 PEX11GQ96HA9 241 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 COL25A1Q9BXS0 654 aaPredicted RBP5.58□□□□□ -1.52
VPS13D-201ENST00000011700 SELENOIQ9C0D9 397 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 SPATA6Q9NWH7 488 aaPredicted RBP5.58□□□□□ -1.52
VPS13D-201ENST00000011700 TAS2R5Q9NYW4 299 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 PTPRFP10586 1907 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 ACOT8O14734 319 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 CTSAP10619 480 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 TYRP1P17643 537 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 DSC1Q08554 894 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 OR2W3Q7Z3T1 314 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 TOLLIPQ9H0E2 274 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 MRPS28Q9Y2Q9 187 aaKnown RBP5.58□□□□□ -1.52
VPS13D-201ENST00000011700 RHBDD3Q9Y3P4 386 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 TIMM10BQ9Y5J6 103 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 A0A0U1RQK1 487 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms