RNA–Protein interactions for RNA: ENST00000003302.8

USP28-201, Transcript of ubiquitin specific peptidase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP28, Length 4,669 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-201ENST00000003302 ZNF679Q8IYX0 411 aa9.55□□□□□ -0.88
USP28-201ENST00000003302 STEAP2Q8NFT2 490 aa9.55□□□□□ -0.88
USP28-201ENST00000003302 OR5D18Q8NGL1 313 aa9.55□□□□□ -0.88
USP28-201ENST00000003302 OR1L3Q8NH93 324 aa9.55□□□□□ -0.88
USP28-201ENST00000003302 ZNF775Q96BV0 537 aaPredicted RBP9.55□□□□□ -0.88
USP28-201ENST00000003302 FBXL21Q9UKT6 434 aa9.55□□□□□ -0.88
USP28-201ENST00000003302 RWDD3Q9Y3V2 267 aa9.55□□□□□ -0.88
USP28-201ENST00000003302 TACC2O95359 2948 aa9.54□□□□□ -0.88
USP28-201ENST00000003302 MAP1BP46821 2468 aaKnown RBP9.54□□□□□ -0.88
USP28-201ENST00000003302 ADAMTS9Q9P2N4 1935 aa9.54□□□□□ -0.88
USP28-201ENST00000003302 TMEM82A0PJX8 343 aa9.54□□□□□ -0.88
USP28-201ENST00000003302 PCP4L1A6NKN8 68 aa9.54□□□□□ -0.88
USP28-201ENST00000003302 RAB27BO00194 218 aa9.54□□□□□ -0.88
USP28-201ENST00000003302 NPIPB7O75200 414 aa9.54□□□□□ -0.88
USP28-201ENST00000003302 TXNDC12O95881 172 aa9.54□□□□□ -0.88
USP28-201ENST00000003302 CD1AP06126 327 aa9.54□□□□□ -0.88
USP28-201ENST00000003302 GLULP15104 373 aa9.54□□□□□ -0.88
USP28-201ENST00000003302 ZP3P21754 424 aa9.54□□□□□ -0.88
USP28-201ENST00000003302 PMPCAQ10713 525 aa9.54□□□□□ -0.88
USP28-201ENST00000003302 SERTAD2Q14140 314 aa9.54□□□□□ -0.88
USP28-201ENST00000003302 SLC51BQ86UW2 128 aa9.54□□□□□ -0.88
USP28-201ENST00000003302 ST7LQ8TDW4 575 aa9.54□□□□□ -0.88
USP28-201ENST00000003302 FGGYQ96C11 551 aa9.54□□□□□ -0.88
USP28-201ENST00000003302 OR2T1O43869 369 aa9.54□□□□□ -0.88
USP28-201ENST00000003302 RP2O75695 350 aa9.54□□□□□ -0.88
USP28-201ENST00000003302 HLA-AP01891 365 aaKnown RBP9.54□□□□□ -0.88
USP28-201ENST00000003302 CXCR1P25024 350 aa9.54□□□□□ -0.88
USP28-201ENST00000003302 ID4P47928 161 aa9.54□□□□□ -0.88
USP28-201ENST00000003302 TAF13Q15543 124 aa9.54□□□□□ -0.88
USP28-201ENST00000003302 ARMC6Q6NXE6 501 aa9.54□□□□□ -0.88
USP28-201ENST00000003302 KRT77Q7Z794 578 aa9.54□□□□□ -0.88
USP28-201ENST00000003302 MED11Q9P086 117 aa9.54□□□□□ -0.88
USP28-201ENST00000003302 MKL2Q9ULH7 1088 aa9.54□□□□□ -0.88
USP28-201ENST00000003302 LOC100289279A0A1B0GTE1 492 aa9.54□□□□□ -0.88
USP28-201ENST00000003302 OR5H14A6NHG9 310 aa9.54□□□□□ -0.88
USP28-201ENST00000003302 TMEM212A6NML5 194 aa9.54□□□□□ -0.88
USP28-201ENST00000003302 C10orf142B7Z368 130 aa9.54□□□□□ -0.88
USP28-201ENST00000003302 DNASE2O00115 360 aaPredicted RBP9.54□□□□□ -0.88
USP28-201ENST00000003302 CLDN4O14493 209 aa9.54□□□□□ -0.88
USP28-201ENST00000003302 ADAP1O75689 374 aa9.54□□□□□ -0.88
USP28-201ENST00000003302 HTR2CP28335 458 aa9.54□□□□□ -0.88
USP28-201ENST00000003302 RAB11BQ15907 218 aa9.54□□□□□ -0.88
USP28-201ENST00000003302 GUCA2BQ16661 112 aa9.54□□□□□ -0.88
USP28-201ENST00000003302 BPIFB2Q8N4F0 458 aa9.54□□□□□ -0.88
USP28-201ENST00000003302 OR10K1Q8NGX5 313 aa9.54□□□□□ -0.88
USP28-201ENST00000003302 BANF2Q9H503 90 aa9.54□□□□□ -0.88
USP28-201ENST00000003302 FSCN3Q9NQT6 498 aa9.54□□□□□ -0.88
USP28-201ENST00000003302 C2CD4DB7Z1M9 353 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 PRAF2O60831 178 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 IL5P05113 134 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 TACSTD2P09758 323 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 IGFBP3P17936 291 aaPredicted RBP9.53□□□□□ -0.88
USP28-201ENST00000003302 HRH1P35367 487 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 GFOD2Q3B7J2 385 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 TFAP2EQ6VUC0 442 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 CATSPERDQ86XM0 798 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 RNF128Q8TEB7 428 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 LIPHQ8WWY8 451 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 C5orf34Q96MH7 638 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 TMED7-TICAM2A0A0A6YYA0 188 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 EEF1E1-BLOC1S5C9J1V9 151 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 H0YIZ8 118 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 SSX5O60225 188 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 AKAIN1P0CW23 69 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 CD96P40200 585 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 EPHA4P54764 986 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 ETV3LQ6ZN32 361 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 KCTD9Q7L273 389 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 OR13C9Q8NGT0 318 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 NPRL2Q8WTW4 380 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 RADILQ96JH8 1075 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 SLC38A3Q99624 504 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 COMMD4Q9H0A8 199 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 DHDHQ9UQ10 334 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 IGKV3D-11A0A0A0MRZ8 115 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 KIR2DS5A0A0G2JLQ3 304 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 A0A0G2JNG1 304 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 SNRPGP15A8MWD9 76 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 KIR2DS3K7RE56 304 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 B3GALNT1O75752 331 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 ACTL6AO96019 429 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 PMP2P02689 132 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 PPICP45877 212 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 POU3F1Q03052 451 aaPredicted RBP9.53□□□□□ -0.88
USP28-201ENST00000003302 BIKQ13323 160 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 KIR2DS5Q14953 304 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 CBLN2Q8IUK8 224 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 BPIFCQ8NFQ6 507 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 OR1S2Q8NGQ3 325 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 VN1R1Q9GZP7 353 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 PLPP3O14495 311 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 LDLRAD4O15165 306 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 TSPAN2O60636 221 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 RAD51DO75771 328 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 ZNF17P17021 662 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 AKR1C4P17516 323 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 AP3S2P59780 193 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 TAGLNQ01995 201 aaKnown RBP9.53□□□□□ -0.88
USP28-201ENST00000003302 CLEC9AQ6UXN8 241 aa9.53□□□□□ -0.88
USP28-201ENST00000003302 C1QL2Q7Z5L3 287 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms