RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 RhoaQ9QUI0 193 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Mmp24Q9R0S2 618 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Vamp5Q9Z2P8 102 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Gm10358A0A1D5RLD8 333 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Olfr1366A0A1W2P740 328 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Olfr1305A2AVW3 312 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Zfp942B8JJA7 486 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Scgb2b3D2XZ38 112 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Olfr740E9PV79 311 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Zfp760E9QAF5 666 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 E030030I06RikJ3QML9 246 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 TspearJ3S6Y1 670 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 MthfslL7N466 203 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 AlyrefO08583 255 aaKnown RBP8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Cldn2O88552 230 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Kcnn4O89109 425 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 TsxP70675 144 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Mark3Q03141 753 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 LcorlQ3U285 600 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Tex10Q3URQ0 928 aaKnown RBP8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Olfr317Q5NCD6 327 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Nr1d2Q60674 576 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Art1Q60935 325 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 OmgQ63912 440 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Rps9Q6ZWN5 194 aaKnown RBP8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Tigd3Q7TM95 470 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Slc51bQ80WK2 128 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Sec22aQ8BH47 307 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Ppm1lQ8BHN0 360 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Lrp12Q8BUJ9 858 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Rgs8Q8BXT1 180 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 KyQ8C8H8 661 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Iglon5Q8HW98 336 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Scgb2b26Q8JZX1 112 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Rbm48Q8K2X2 371 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Olfr1208Q8VG47 308 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Olfr606Q8VGZ8 319 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Hdac8Q8VH37 377 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Rnh1Q91VI7 456 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Flvcr2Q91X85 551 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Catsper1Q91ZR5 686 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Kremen1Q99N43 473 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Rpa3Q9CQ71 121 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Lrrc57Q9D1G5 239 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Wdr20Q9D5R2 567 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Mid2Q9QUS6 705 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Nme7Q9QXL8 395 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Plek2Q9WV52 353 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Cpne6Q9Z140 557 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Trav13n-2A0A0G2JF93 110 aa8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 IsxA1A546 240 aa8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Xpnpep3B7ZMP1 506 aaKnown RBP8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Smim20D3Z7Q2 69 aa8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Vmn2r118E9Q1C1 853 aa8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 4930579F01RikE9Q3L6 325 aa8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Kcnk1O08581 336 aa8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Ccrl2O35457 360 aa8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 DffbO54788 344 aaKnown RBP8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Btnl2O70355 454 aa8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Slc22a2O70577 553 aa8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 P01667 111 aa8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 P01669 111 aa8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Fgf5P15656 264 aa8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Drd4P51436 387 aa8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Crmp1P97427 572 aa8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Gjb5Q02739 271 aa8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Nr4a2Q06219 598 aa8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Prrx2Q06348 247 aa8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Mdh1bQ5F204 500 aa8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 PatjQ63ZW7 1834 aa8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Mfsd4aQ6PDC8 510 aa8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Olfr1115Q7TR53 326 aa8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Samd4bQ80XS6 687 aa8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 H2-M10.2Q85ZW9 329 aa8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Igdcc3Q8BQC3 813 aa8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Tab1Q8CF89 502 aa8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 LctlQ8K1F9 566 aa8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Rab15Q8K386 212 aa8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Lgi3Q8K406 548 aa8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Traf3ip2Q8N7N6 555 aa8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Vmn1r229Q8R2A9 306 aa8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Vmn1r6Q8R2D4 303 aa8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Rfc3Q8R323 356 aaKnown RBP8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Olfr1424Q8VFV1 313 aa8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 St3gal6Q8VIB3 329 aa8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Ppp1r16aQ923M0 524 aa8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Lysmd3Q99LE3 305 aa8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Mrpl16Q99N93 251 aa8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Abcg5Q99PE8 652 aa8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Slc19a3Q99PL8 488 aa8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 RTRAFQ9CQE8 244 aa8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Isl2Q9CXV0 359 aa8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 5430402E10RikQ9D3N5 173 aa8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Lypd6bQ9D7F2 191 aa8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 ClnkQ9QZE2 435 aa8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 EmcnQ9R0H2 261 aa8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Cav2Q9WVC3 162 aa8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Lilra6A0A0B4J1F3 663 aa8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Gm5890A0A140LI04 305 aa8.11□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Zar1lC3VD30 291 aa8.11□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 38.3 ms