RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 TxnipQ8BG60 397 aa20.52■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Baiap2Q8BKX1 535 aa20.52■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Steap2Q8BWB6 489 aa20.52■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Gm5662Q8BX20 144 aa20.52■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Olfr656Q8VGX9 329 aa20.52■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Pskh1Q91YA2 424 aa20.52■□□□□ 0.88
Upf3a-201ENSMUST00000043767 SdhcQ9CZB0 169 aaKnown RBP20.52■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Osbpl3Q9DBS9 855 aa20.52■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Slc9a3r2Q9JHL1 337 aa20.52■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Alyref2Q9JJW6 218 aa20.52■□□□□ 0.88
Upf3a-201ENSMUST00000043767 Ighv6-6A0A075B5T3 119 aa20.52■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Prps1l3G3UXL2 318 aa20.52■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Ccr2P51683 373 aa20.52■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Pgap1Q3UUQ7 922 aa20.52■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Opa3Q505D7 179 aa20.52■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Olfr1229Q7TQZ9 311 aa20.52■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Olfr885Q7TRE0 309 aa20.52■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Gpr176Q80WT4 515 aa20.52■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Trmt61aQ80XC2 290 aa20.52■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Hus1bQ8K572 276 aa20.52■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Prps1Q9D7G0 318 aa20.52■□□□□ 0.87
Upf3a-201ENSMUST00000043767 A0A286YDM2 672 aa20.51■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Vmn1r9A2RST7 299 aa20.51■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Olfr519K7N645 319 aa20.51■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Adam10O35598 749 aa20.51■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Lbx1P52955 282 aa20.51■□□□□ 0.87
Upf3a-201ENSMUST00000043767 DraxinQ6PAL1 343 aa20.51■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Tas2r136Q7TQA8 305 aa20.51■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Olfr884Q7TRE1 309 aa20.51■□□□□ 0.87
Upf3a-201ENSMUST00000043767 BtlaQ7TSA3 306 aa20.51■□□□□ 0.87
Upf3a-201ENSMUST00000043767 NdnfQ8C119 568 aa20.51■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Fbxw19Q8C2W8 466 aa20.51■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Elfn1Q8C8T7 828 aa20.51■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Saysd1Q8K190 188 aa20.51■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Olfr215Q8VF82 310 aa20.51■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Olfr1226Q8VGM5 310 aa20.51■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Ier3ip1Q9CR20 82 aa20.51■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Sh3bgrlQ9JJU8 114 aaKnown RBP20.51■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Pkd1l3Q2EG98 2201 aa20.51■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Il2rgP34902 369 aa20.5■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Pcbp4P57724 403 aaKnown RBP20.5■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Foxr2Q3UM89 302 aa20.5■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Bcap29Q61334 240 aa20.5■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Zfp975Q6NVD6 525 aa20.5■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Znf8Q8BGV5 572 aa20.5■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Prkd2Q8BZ03 875 aa20.5■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Sulf2Q8CFG0 875 aa20.5■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Olfr486Q8VFD0 314 aa20.5■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Olfr202Q8VGQ3 307 aa20.5■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Fn3kQ9ER35 309 aa20.5■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Znf346Q9R0B7 294 aa20.5■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Fam90a1aA2A4E2 429 aa20.5■□□□□ 0.87
Upf3a-201ENSMUST00000043767 E030025P04RikA2A6V5 185 aa20.5■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Hist1h2abC0HKE1 130 aa20.5■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Hist1h2acC0HKE2 130 aa20.5■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Hist1h2adC0HKE3 130 aa20.5■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Hist1h2aeC0HKE4 130 aa20.5■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Hist1h2agC0HKE5 130 aa20.5■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Hist1h2aiC0HKE6 130 aa20.5■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Hist1h2anC0HKE7 130 aa20.5■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Hist1h2aoC0HKE8 130 aa20.5■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Hist1h2apC0HKE9 130 aa20.5■□□□□ 0.87
Upf3a-201ENSMUST00000043767 NlkO54949 527 aa20.5■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Csf1P07141 552 aa20.5■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Mbl2P41317 244 aa20.5■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Abcd3P55096 659 aa20.5■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Rras2P62071 204 aa20.5■□□□□ 0.87
Upf3a-201ENSMUST00000043767 HgfQ08048 728 aa20.5■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Olfr151Q60893 309 aa20.5■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Arhgef39Q66JY6 344 aa20.5■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Hist3h2aQ8BFU2 130 aaKnown RBP20.5■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Ubald2Q8BQH4 164 aa20.5■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Fam120cQ8C3F2 1091 aaKnown RBP20.5■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Mettl21eQ8CDZ2 244 aa20.5■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Hist1h2afQ8CGP5 130 aa20.5■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Hist1h2ahQ8CGP6 128 aa20.5■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Hist1h2akQ8CGP7 130 aa20.5■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Ntng2Q8R4F1 589 aaKnown RBP20.5■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Dkk4Q8VEJ3 221 aa20.5■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Olfr771Q8VFH6 317 aa20.5■□□□□ 0.87
Upf3a-201ENSMUST00000043767 TipinQ91WA1 278 aa20.5■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Krt88Q9CPR6 171 aa20.5■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Wdr61Q9ERF3 305 aa20.5■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Isg20Q9JL16 300 aa20.5■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Ighv1-78A0A0G2JGN3 117 aa20.49■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Zfp534A2A7A1 661 aa20.49■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Ppp1r3dA2AJW4 279 aa20.49■□□□□ 0.87
Upf3a-201ENSMUST00000043767 DytnA2CI98 653 aa20.49■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Gm1330D3Z460 184 aa20.49■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Gm20715E9Q3L7 95 aa20.49■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Gm6576F6YTZ4 274 aa20.49■□□□□ 0.87
Upf3a-201ENSMUST00000043767 S100a2J3QMC7 104 aa20.49■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Vmn2r89O35199 507 aa20.49■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Chst3O88199 472 aa20.49■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Znf271P15620 580 aa20.49■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Clk1P22518 483 aa20.49■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Htr1fQ02284 366 aa20.49■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Tamm41Q3TUH1 337 aa20.49■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Zdhhc8Q5Y5T5 762 aa20.49■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Dvl3Q61062 716 aa20.49■□□□□ 0.87
Retrieved 100 of 22,080 RNA–protein pairs in 27.9 ms