RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Zfp994J3QM38 661 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 H2-Q10P01898 325 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Fkbp2P45878 140 aaKnown RBP10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 StsP50427 624 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Flvcr2Q91X85 551 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Coq5Q9CXI0 327 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Tomm34Q9CYG7 309 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Emc4Q9CZX9 183 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Cir1Q9DA19 450 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Scamp2Q9ERN0 329 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Il17bQ9QXT6 180 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Pramef25A2ASI9 494 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Chrnb1P09690 501 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Nkx2-2P42586 273 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Grxcr2Q3TYR5 254 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Atg4dQ8BGV9 474 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Ppp1r3eQ8BRJ4 279 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Vmn1r183Q8K3N5 305 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Il36bQ9D6Z6 183 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 TrirQ9D735 173 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Wwtr1Q9EPK5 395 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 TriobpQ99KW3 2014 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Gm28557A0A087WQQ0 336 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Ighv1-43A0A0A6YXN5 117 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Olfr1425K7N659 312 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 MakQ04859 622 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Itgb8Q0VBD0 767 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Syngr3Q8R191 229 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Olfr1426Q8VG74 311 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 2210010C04RikQ9CPN9 247 aaKnown RBP10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Snapc3Q9D2C9 407 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Trappc4Q9ES56 219 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Cts8Q9JI81 333 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Baz2bA2AUY4 2123 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Hprt1P00493 218 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 UbcP0CG50 734 aaKnown RBP10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Znf271P15620 580 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Ube2iP63280 158 aaKnown RBP10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Milr1Q3TB92 246 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 SordQ64442 357 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Prss54Q7M756 383 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Elp5Q99L85 300 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 PsenenQ9CQR7 101 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Pmm2Q9Z2M7 242 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Ndufaf5A2APY7 343 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Gm42957D6RFQ2 366 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Gm10037E9PX85 104 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Coq10aE9Q3H6 259 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Ighg2cF6TQW2 404 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Phlda2O08969 144 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 B3galt1O54904 326 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 P01864 335 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Anxa7Q07076 463 aaKnown RBP10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Cnpy1Q4VAB4 94 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 H2-M10.3Q85ZW6 330 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Slc35b4Q8CIA5 331 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Pom121Q8K3Z9 1200 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Vmn1r89Q8R256 316 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Cdca5Q9CPY3 264 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Samd8Q9DA37 478 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Clec4eQ9R0Q8 214 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Znf318Q99PP2 2237 aa10.82□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Olfr1247A2AT78 314 aa10.81□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Creg1O88668 220 aa10.81□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Tpi1P17751 299 aaKnown RBP10.81□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Csf2rbP26955 896 aa10.81□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Agtr1aP29754 359 aa10.81□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Mfap2P55002 183 aa10.81□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Il9rQ01114 468 aa10.81□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Olfr401Q8VFX6 315 aa10.81□□□□□ -0.68
Pcif1-201ENSMUST00000041643 TipinQ91WA1 278 aa10.81□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Bhlhe41Q99PV5 410 aa10.81□□□□□ -0.68
Pcif1-201ENSMUST00000041643 MmachcQ9CZD0 279 aa10.81□□□□□ -0.68
Pcif1-201ENSMUST00000041643 9230104L09RikQ9D264 133 aa10.81□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Tmem8aQ9ESN3 769 aa10.81□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Scgb1b30A2BH64 92 aa10.81□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Zfp988F6VKC7 633 aa10.81□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Gm21411J3KMS0 136 aa10.81□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Sh2d1bO35324 132 aa10.81□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Zfp987Q32P14 633 aa10.81□□□□□ -0.68
Pcif1-201ENSMUST00000041643 CcnjQ3TZI6 379 aa10.81□□□□□ -0.68
Pcif1-201ENSMUST00000041643 EgflamQ4VBE4 1017 aa10.81□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Grb2Q60631 217 aaKnown RBP10.81□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Dlec1Q8BLA1 635 aa10.81□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Sp110Q8BVK9 445 aa10.81□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Lap3Q9CPY7 519 aa10.81□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Tomm40lQ9CZR3 308 aa10.81□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Kcnmb4Q9JIN6 210 aa10.81□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Neu3Q9JMH7 418 aa10.81□□□□□ -0.68
Pcif1-201ENSMUST00000041643 PlpbpQ9Z2Y8 274 aa10.81□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Rd3lB2RV38 197 aa10.81□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Gm10338K7N692 204 aa10.81□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Pou2f1P25425 770 aa10.81□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Ctsll3Q3ULP7 331 aa10.81□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Jagn1Q5XKN4 183 aa10.81□□□□□ -0.68
Pcif1-201ENSMUST00000041643 SprQ64105 261 aa10.81□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Olfr285Q7TS17 319 aa10.81□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Nedd4lQ8CFI0 1004 aa10.81□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Olfr1491Q8VEZ5 319 aa10.81□□□□□ -0.68
Pcif1-201ENSMUST00000041643 Toe1Q9D2E2 511 aa10.81□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 30.8 ms